| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119717013
Identifier: 119717013
GI number: 119717013
Start: 2957372
End: 2957905
Strand: Reverse
Name: 119717013
Synonym: Noca_2789
Alternate gene names: NA
Gene position: 2957905-2957372 (Counterclockwise)
Preceding gene: 119717014
Following gene: 119717012
Centisome position: 59.33
GC content: 70.41
Gene sequence:
>534_bases GTGAGCGCGGCCGCGCAGGACGAGGGCCGCCACGCGCGGATCCTGGCCGAGGCCGAGCGGATCATGGCGCTCGGCGAGTG CTCGGAGTCCCAGGCGCCGTACGAGGTGAACCAGCCGACGATCGGCACCTGGCTCGACGCGATGGGCTACGACAACGAGC GCTTCCGCTCCGGCGAGGCGCCGCCGTCGATGGCGCAGGTCTGGACGATGCGCGGCCTCGGTCGCCGCCGTCCCGACGAC GACCCGCTGAGTGCGATGATGGCCCTCCTCACGGACGAGGGCTACACCGCCGTGCTCGGCACCAACTGCGAGCAGAGCTA CGACCGCTACCTCAAGGTCGGCGAGCACGTCCGCGTCACCACCGCGCTCGACTCCGTGGTCGGGCCGAAGCTCACCGCGA TGGGCGAGGGCTACTTCGTCACGTCCCGCAACACCTGGTACGTCGCCGGTCCCGACGGGCACAGCGAGCGCGTCGCGACC ATGCTGTTCCGGGTGCTCAAGTTCATTCCCAAGGGCTCTGGAGGTGGCGCATGA
Upstream 100 bases:
>100_bases GCGATGTTCGGGCTCGGGCTGCCGCGGGTGCCGCGATGAATCACCCCACGAAGTTCTTCTCCTCCGCTTCGCTCCCCCGA ACAACTTCGCGGGGACCCCG
Downstream 100 bases:
>100_bases CTGCAGGAATCGTGCGCCCGATGATCGGGCGCGACTCCAGATTCTTCTGGGACGGCACCGCGCTCGGCGAGCTGCGCATC CAGAAGTGCAACGCGTGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MSAAAQDEGRHARILAEAERIMALGECSESQAPYEVNQPTIGTWLDAMGYDNERFRSGEAPPSMAQVWTMRGLGRRRPDD DPLSAMMALLTDEGYTAVLGTNCEQSYDRYLKVGEHVRVTTALDSVVGPKLTAMGEGYFVTSRNTWYVAGPDGHSERVAT MLFRVLKFIPKGSGGGA
Sequences:
>Translated_177_residues MSAAAQDEGRHARILAEAERIMALGECSESQAPYEVNQPTIGTWLDAMGYDNERFRSGEAPPSMAQVWTMRGLGRRRPDD DPLSAMMALLTDEGYTAVLGTNCEQSYDRYLKVGEHVRVTTALDSVVGPKLTAMGEGYFVTSRNTWYVAGPDGHSERVAT MLFRVLKFIPKGSGGGA >Mature_176_residues SAAAQDEGRHARILAEAERIMALGECSESQAPYEVNQPTIGTWLDAMGYDNERFRSGEAPPSMAQVWTMRGLGRRRPDDD PLSAMMALLTDEGYTAVLGTNCEQSYDRYLKVGEHVRVTTALDSVVGPKLTAMGEGYFVTSRNTWYVAGPDGHSERVATM LFRVLKFIPKGSGGGA
Specific function: Unknown
COG id: COG1545
COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19325; Mature: 19194
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAAQDEGRHARILAEAERIMALGECSESQAPYEVNQPTIGTWLDAMGYDNERFRSGEA CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHCCCCHHHCCCCC PPSMAQVWTMRGLGRRRPDDDPLSAMMALLTDEGYTAVLGTNCEQSYDRYLKVGEHVRVT CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCEEEH TALDSVVGPKLTAMGEGYFVTSRNTWYVAGPDGHSERVATMLFRVLKFIPKGSGGGA HHHHHHHCCCEEECCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SAAAQDEGRHARILAEAERIMALGECSESQAPYEVNQPTIGTWLDAMGYDNERFRSGEA CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHCCCCHHHCCCCC PPSMAQVWTMRGLGRRRPDDDPLSAMMALLTDEGYTAVLGTNCEQSYDRYLKVGEHVRVT CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCEEEH TALDSVVGPKLTAMGEGYFVTSRNTWYVAGPDGHSERVATMLFRVLKFIPKGSGGGA HHHHHHHCCCEEECCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA