| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716984
Identifier: 119716984
GI number: 119716984
Start: 2932659
End: 2933081
Strand: Reverse
Name: 119716984
Synonym: Noca_2759
Alternate gene names: NA
Gene position: 2933081-2932659 (Counterclockwise)
Preceding gene: 119716988
Following gene: 119716983
Centisome position: 58.83
GC content: 74.94
Gene sequence:
>423_bases ATGCTGGTCCGGTGGTTCACCCGGAGCGACGTACGCCGGCGAATGCTCGCGGACAGGGACCCGGCGCTCTCGGCGACCGA TGCGTGGTTGCTCGGCCGGATCACCGACGCCGGCCCGCTGCGCCTGTCGGAGCTCGCGGACTGGCAGGAGGTCGACCGGT CGACGATGAGCACCGAGATCCGGCGGCTGGAGGCCCTGGGCCTCGTCTCACGGGCGACGGACCCGCGGGACGGCCGTGCC GTCCTGGTGAAGGCCACCCGCACCGGCGCCGCCCGGCACCGGCGTACGAAGCGCACCGCCCGGACGGTCTATGCGGCGCT GCTCGCCGACTGGTCGGAGGAGGACCTGCGCCAGGCCGCCCACGTCGCCGCGCGGCTGGTCGAGACCTTCGAGCGCCGCA GCAGCGGGGGCGGTGCCGAGTAG
Upstream 100 bases:
>100_bases ACAGTTGGGGTATTCAAACCAAAACGATTGGAGTACCCTCACCATCGTGACGAGTGCAGAAGCGCAGGAGGCGGCTGTCG CGCTGGAGCGGGCCGTGCCG
Downstream 100 bases:
>100_bases CGTCGCGCCAGGCCTCGGACGCCACGACCAGTTCCACATTTCTCGCCCCGCGGCCTTGACTCAGGTGACGATCGTCACAT AGAATCGAGCACATGTTCGA
Product: regulatory protein MarR
Products: NA
Alternate protein names: Regulatory Protein MarR
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MLVRWFTRSDVRRRMLADRDPALSATDAWLLGRITDAGPLRLSELADWQEVDRSTMSTEIRRLEALGLVSRATDPRDGRA VLVKATRTGAARHRRTKRTARTVYAALLADWSEEDLRQAAHVAARLVETFERRSSGGGAE
Sequences:
>Translated_140_residues MLVRWFTRSDVRRRMLADRDPALSATDAWLLGRITDAGPLRLSELADWQEVDRSTMSTEIRRLEALGLVSRATDPRDGRA VLVKATRTGAARHRRTKRTARTVYAALLADWSEEDLRQAAHVAARLVETFERRSSGGGAE >Mature_140_residues MLVRWFTRSDVRRRMLADRDPALSATDAWLLGRITDAGPLRLSELADWQEVDRSTMSTEIRRLEALGLVSRATDPRDGRA VLVKATRTGAARHRRTKRTARTVYAALLADWSEEDLRQAAHVAARLVETFERRSSGGGAE
Specific function: Unknown
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15744; Mature: 15744
Theoretical pI: Translated: 11.54; Mature: 11.54
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVRWFTRSDVRRRMLADRDPALSATDAWLLGRITDAGPLRLSELADWQEVDRSTMSTEI CEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH RRLEALGLVSRATDPRDGRAVLVKATRTGAARHRRTKRTARTVYAALLADWSEEDLRQAA HHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH HVAARLVETFERRSSGGGAE HHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLVRWFTRSDVRRRMLADRDPALSATDAWLLGRITDAGPLRLSELADWQEVDRSTMSTEI CEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH RRLEALGLVSRATDPRDGRAVLVKATRTGAARHRRTKRTARTVYAALLADWSEEDLRQAA HHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH HVAARLVETFERRSSGGGAE HHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA