| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716942
Identifier: 119716942
GI number: 119716942
Start: 2889141
End: 2890001
Strand: Reverse
Name: 119716942
Synonym: Noca_2717
Alternate gene names: NA
Gene position: 2890001-2889141 (Counterclockwise)
Preceding gene: 119716943
Following gene: 119716941
Centisome position: 57.96
GC content: 72.82
Gene sequence:
>861_bases ATGCCTGACTCCCGGACCACGACGGCCGACCGGGTCAGCACGCCGCTGCTGACGCTGATCACCCAGCAGTCCCTCGACGA GGACTACCGCCACGTCGCGGAGCGCCGCGCCGAGCAGGGGAGCACGCCGACCGGGCGGCGCCGCCTGGGAACCGCGACCG TGGTGGTCGCGGTCTTCGGCCTGCTGGTGACGGTCGCCGCCGTGCAGAACTCCCAGCGGGCCGGGGTGCAGAGCGCCAGC CGGGCGTCGCTGATCGCGAACATCGACCGCGGCCGGGCCGACCTGGCCGCCCTCCAGGAGCGCATCGTCGACCTCCGCGA GCTCGACGTCTCGCTGCAGGACAACCTCGACGACGTCACCGCCGCCGCGCAGGGTGCACAGGCCCGGGTGCAGCGGCTCG GAGCGGTCACCGGCTTCGGCGCCGTCACCGGCCCGGGCGTGCGCGTCACGGTCGACGACGGCGACCACTTCACGGTCCGC GACCGGGACCTGCGTCCGCTGGTCGACGGGCTGTGGAACGCCGGGGCCGAGGCGATCTCGATCAACGGCCAGCGGCTCAC CGCACGGACGCCGATCCGCAACTCGGGCGCCGCGATCCACGTGAACTTCCGCCCGCTGTCGCCGCCGTACGTCGTGCTCG CCATCGGTGACCCGCGCACCCTCCAGGCCGACCTGATGGAGACGACGAGCGGCCTGACGTTCCGCGACACGGCCGCCCAG CTCGGCTTCCCCTGGAACATGGACAATGTGGATCGGCTCTCCCTCCCGGCGGCCCCGCAGCGACTGATCCAGCTGGACTG GGCCGTCGAGGGCACCGCCAAGGAGAACCTCGTCAAGCGTCGGAAGGACACCCCACCGTGA
Upstream 100 bases:
>100_bases CTGTGGGGGATCGGGCTCTACTGGTGGGCCGGCATCCTCTACGCCTGGCAGGTGCGCACCCTGCTGGCCACCACCGAGAG GCGGACGGCGGCGGTCCCCG
Downstream 100 bases:
>100_bases TCGCCGCACTCGGGCTGCTGGTCGGGATCGTGCTGGGCGTGGTCTTCCAGCCGGACGTCCCCGCGGGCCTCGAGCCCTAC CTGCCGATCGCCGTCGTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MPDSRTTTADRVSTPLLTLITQQSLDEDYRHVAERRAEQGSTPTGRRRLGTATVVVAVFGLLVTVAAVQNSQRAGVQSAS RASLIANIDRGRADLAALQERIVDLRELDVSLQDNLDDVTAAAQGAQARVQRLGAVTGFGAVTGPGVRVTVDDGDHFTVR DRDLRPLVDGLWNAGAEAISINGQRLTARTPIRNSGAAIHVNFRPLSPPYVVLAIGDPRTLQADLMETTSGLTFRDTAAQ LGFPWNMDNVDRLSLPAAPQRLIQLDWAVEGTAKENLVKRRKDTPP
Sequences:
>Translated_286_residues MPDSRTTTADRVSTPLLTLITQQSLDEDYRHVAERRAEQGSTPTGRRRLGTATVVVAVFGLLVTVAAVQNSQRAGVQSAS RASLIANIDRGRADLAALQERIVDLRELDVSLQDNLDDVTAAAQGAQARVQRLGAVTGFGAVTGPGVRVTVDDGDHFTVR DRDLRPLVDGLWNAGAEAISINGQRLTARTPIRNSGAAIHVNFRPLSPPYVVLAIGDPRTLQADLMETTSGLTFRDTAAQ LGFPWNMDNVDRLSLPAAPQRLIQLDWAVEGTAKENLVKRRKDTPP >Mature_285_residues PDSRTTTADRVSTPLLTLITQQSLDEDYRHVAERRAEQGSTPTGRRRLGTATVVVAVFGLLVTVAAVQNSQRAGVQSASR ASLIANIDRGRADLAALQERIVDLRELDVSLQDNLDDVTAAAQGAQARVQRLGAVTGFGAVTGPGVRVTVDDGDHFTVRD RDLRPLVDGLWNAGAEAISINGQRLTARTPIRNSGAAIHVNFRPLSPPYVVLAIGDPRTLQADLMETTSGLTFRDTAAQL GFPWNMDNVDRLSLPAAPQRLIQLDWAVEGTAKENLVKRRKDTPP
Specific function: Unknown
COG id: COG3879
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0749 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010273 [H]
Pfam domain/function: PF05949 DUF881 [H]
EC number: NA
Molecular weight: Translated: 30869; Mature: 30738
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDSRTTTADRVSTPLLTLITQQSLDEDYRHVAERRAEQGSTPTGRRRLGTATVVVAVFG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH LLVTVAAVQNSQRAGVQSASRASLIANIDRGRADLAALQERIVDLRELDVSLQDNLDDVT HHHHHHHHHCCHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHCCHHHHH AAAQGAQARVQRLGAVTGFGAVTGPGVRVTVDDGDHFTVRDRDLRPLVDGLWNAGAEAIS HHHCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHCCCCEEE INGQRLTARTPIRNSGAAIHVNFRPLSPPYVVLAIGDPRTLQADLMETTSGLTFRDTAAQ ECCCEEEEECCCCCCCCEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHCCCEEECHHHH LGFPWNMDNVDRLSLPAAPQRLIQLDWAVEGTAKENLVKRRKDTPP CCCCCCCCCCCCCCCCCCHHHHEEEHHEECCCHHHHHHHHHCCCCC >Mature Secondary Structure PDSRTTTADRVSTPLLTLITQQSLDEDYRHVAERRAEQGSTPTGRRRLGTATVVVAVFG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH LLVTVAAVQNSQRAGVQSASRASLIANIDRGRADLAALQERIVDLRELDVSLQDNLDDVT HHHHHHHHHCCHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHCCHHHHH AAAQGAQARVQRLGAVTGFGAVTGPGVRVTVDDGDHFTVRDRDLRPLVDGLWNAGAEAIS HHHCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHCCCCEEE INGQRLTARTPIRNSGAAIHVNFRPLSPPYVVLAIGDPRTLQADLMETTSGLTFRDTAAQ ECCCEEEEECCCCCCCCEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHCCCEEECHHHH LGFPWNMDNVDRLSLPAAPQRLIQLDWAVEGTAKENLVKRRKDTPP CCCCCCCCCCCCCCCCCCHHHHEEEHHEECCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]