Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119716942

Identifier: 119716942

GI number: 119716942

Start: 2889141

End: 2890001

Strand: Reverse

Name: 119716942

Synonym: Noca_2717

Alternate gene names: NA

Gene position: 2890001-2889141 (Counterclockwise)

Preceding gene: 119716943

Following gene: 119716941

Centisome position: 57.96

GC content: 72.82

Gene sequence:

>861_bases
ATGCCTGACTCCCGGACCACGACGGCCGACCGGGTCAGCACGCCGCTGCTGACGCTGATCACCCAGCAGTCCCTCGACGA
GGACTACCGCCACGTCGCGGAGCGCCGCGCCGAGCAGGGGAGCACGCCGACCGGGCGGCGCCGCCTGGGAACCGCGACCG
TGGTGGTCGCGGTCTTCGGCCTGCTGGTGACGGTCGCCGCCGTGCAGAACTCCCAGCGGGCCGGGGTGCAGAGCGCCAGC
CGGGCGTCGCTGATCGCGAACATCGACCGCGGCCGGGCCGACCTGGCCGCCCTCCAGGAGCGCATCGTCGACCTCCGCGA
GCTCGACGTCTCGCTGCAGGACAACCTCGACGACGTCACCGCCGCCGCGCAGGGTGCACAGGCCCGGGTGCAGCGGCTCG
GAGCGGTCACCGGCTTCGGCGCCGTCACCGGCCCGGGCGTGCGCGTCACGGTCGACGACGGCGACCACTTCACGGTCCGC
GACCGGGACCTGCGTCCGCTGGTCGACGGGCTGTGGAACGCCGGGGCCGAGGCGATCTCGATCAACGGCCAGCGGCTCAC
CGCACGGACGCCGATCCGCAACTCGGGCGCCGCGATCCACGTGAACTTCCGCCCGCTGTCGCCGCCGTACGTCGTGCTCG
CCATCGGTGACCCGCGCACCCTCCAGGCCGACCTGATGGAGACGACGAGCGGCCTGACGTTCCGCGACACGGCCGCCCAG
CTCGGCTTCCCCTGGAACATGGACAATGTGGATCGGCTCTCCCTCCCGGCGGCCCCGCAGCGACTGATCCAGCTGGACTG
GGCCGTCGAGGGCACCGCCAAGGAGAACCTCGTCAAGCGTCGGAAGGACACCCCACCGTGA

Upstream 100 bases:

>100_bases
CTGTGGGGGATCGGGCTCTACTGGTGGGCCGGCATCCTCTACGCCTGGCAGGTGCGCACCCTGCTGGCCACCACCGAGAG
GCGGACGGCGGCGGTCCCCG

Downstream 100 bases:

>100_bases
TCGCCGCACTCGGGCTGCTGGTCGGGATCGTGCTGGGCGTGGTCTTCCAGCCGGACGTCCCCGCGGGCCTCGAGCCCTAC
CTGCCGATCGCCGTCGTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MPDSRTTTADRVSTPLLTLITQQSLDEDYRHVAERRAEQGSTPTGRRRLGTATVVVAVFGLLVTVAAVQNSQRAGVQSAS
RASLIANIDRGRADLAALQERIVDLRELDVSLQDNLDDVTAAAQGAQARVQRLGAVTGFGAVTGPGVRVTVDDGDHFTVR
DRDLRPLVDGLWNAGAEAISINGQRLTARTPIRNSGAAIHVNFRPLSPPYVVLAIGDPRTLQADLMETTSGLTFRDTAAQ
LGFPWNMDNVDRLSLPAAPQRLIQLDWAVEGTAKENLVKRRKDTPP

Sequences:

>Translated_286_residues
MPDSRTTTADRVSTPLLTLITQQSLDEDYRHVAERRAEQGSTPTGRRRLGTATVVVAVFGLLVTVAAVQNSQRAGVQSAS
RASLIANIDRGRADLAALQERIVDLRELDVSLQDNLDDVTAAAQGAQARVQRLGAVTGFGAVTGPGVRVTVDDGDHFTVR
DRDLRPLVDGLWNAGAEAISINGQRLTARTPIRNSGAAIHVNFRPLSPPYVVLAIGDPRTLQADLMETTSGLTFRDTAAQ
LGFPWNMDNVDRLSLPAAPQRLIQLDWAVEGTAKENLVKRRKDTPP
>Mature_285_residues
PDSRTTTADRVSTPLLTLITQQSLDEDYRHVAERRAEQGSTPTGRRRLGTATVVVAVFGLLVTVAAVQNSQRAGVQSASR
ASLIANIDRGRADLAALQERIVDLRELDVSLQDNLDDVTAAAQGAQARVQRLGAVTGFGAVTGPGVRVTVDDGDHFTVRD
RDLRPLVDGLWNAGAEAISINGQRLTARTPIRNSGAAIHVNFRPLSPPYVVLAIGDPRTLQADLMETTSGLTFRDTAAQL
GFPWNMDNVDRLSLPAAPQRLIQLDWAVEGTAKENLVKRRKDTPP

Specific function: Unknown

COG id: COG3879

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0749 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010273 [H]

Pfam domain/function: PF05949 DUF881 [H]

EC number: NA

Molecular weight: Translated: 30869; Mature: 30738

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDSRTTTADRVSTPLLTLITQQSLDEDYRHVAERRAEQGSTPTGRRRLGTATVVVAVFG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LLVTVAAVQNSQRAGVQSASRASLIANIDRGRADLAALQERIVDLRELDVSLQDNLDDVT
HHHHHHHHHCCHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHCCHHHHH
AAAQGAQARVQRLGAVTGFGAVTGPGVRVTVDDGDHFTVRDRDLRPLVDGLWNAGAEAIS
HHHCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHCCCCEEE
INGQRLTARTPIRNSGAAIHVNFRPLSPPYVVLAIGDPRTLQADLMETTSGLTFRDTAAQ
ECCCEEEEECCCCCCCCEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHCCCEEECHHHH
LGFPWNMDNVDRLSLPAAPQRLIQLDWAVEGTAKENLVKRRKDTPP
CCCCCCCCCCCCCCCCCCHHHHEEEHHEECCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
PDSRTTTADRVSTPLLTLITQQSLDEDYRHVAERRAEQGSTPTGRRRLGTATVVVAVFG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LLVTVAAVQNSQRAGVQSASRASLIANIDRGRADLAALQERIVDLRELDVSLQDNLDDVT
HHHHHHHHHCCHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHCCHHHHH
AAAQGAQARVQRLGAVTGFGAVTGPGVRVTVDDGDHFTVRDRDLRPLVDGLWNAGAEAIS
HHHCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHCCCCEEE
INGQRLTARTPIRNSGAAIHVNFRPLSPPYVVLAIGDPRTLQADLMETTSGLTFRDTAAQ
ECCCEEEEECCCCCCCCEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHCCCEEECHHHH
LGFPWNMDNVDRLSLPAAPQRLIQLDWAVEGTAKENLVKRRKDTPP
CCCCCCCCCCCCCCCCCCHHHHEEEHHEECCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]