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The map label for this gene is 119716740

Identifier: 119716740

GI number: 119716740

Start: 2680690

End: 2681478

Strand: Direct

Name: 119716740

Synonym: Noca_2514

Alternate gene names: NA

Gene position: 2680690-2681478 (Clockwise)

Preceding gene: 119716736

Following gene: 119716744

Centisome position: 53.77

GC content: 76.3

Gene sequence:

>789_bases
GTGGAGGCGTGCGAGATCGAGCCGGGCGACCGACCGGGGTCGTTCGTGCTGCGCATGTCCGGCCTGAGCCAGTCGCACGT
GGACCTCGACGACCCGACCCGGCTCGCCTTCGACTACGTACGCCGGATGGCCGACGTCGTGGACGCCGCCGCCCCGCCCG
GGGCGCCGGTGCGGGTCGTACACGTCGGCGGGGCCGCGATGACGCTGCCTCGCTACGTCGCCGTCACCCGGCCGGGTTCA
CCCCAGGTCGTGCTGGAGCCGGCGAGCGAGGTCACCGAGCTGGTCCGCCGCGAGCTCCCGCTGCCGCGCCGCAGCGGGAT
CAAGGTGCGTGGGGTCGACGGCCGGCAGGGCGTCGCCGCGCTCCGCGACGCCTACGCGGAGCTGGTCCTCCTCGACGCCT
TCGCCGACGGCCGGGTGCCGGCGGACCTGGTGACGGTCGAGTTCTTCGAGGACGTCGCCCGGGTCCTCGGTGCCGAGGGA
CTGCTGGTGCTCAACCTCACCGACCGGGCGCCGTTCGGGTGGACCCGGCGGGTGGTCGCCGGGCTTCGGCTGGTGTTCGG
GTCGGTCGCCCTGGGCGTCGAGCCGGCGACCCTGCGGGCCCGCCGGCTCGGCAACCTGGTCGTCGTCGCCTCGCGGGGCC
GGGTGCCGACCGACGCGCTGGCGGCCCGGGCGGCGAGCGGGTCCGCGCCGTACCGGGTGCTGGACGGGCGCCAGGTCAGC
GACCGCTTCGGTGGCGGCACTGCCTTCACCGACAGCGACTCCGCCCCCTCGCCGGCTCCGGACGGCTGA

Upstream 100 bases:

>100_bases
GCTCTTGCCGGAGCCGGACACCCCCACGACCGCGATCCGCTCCGGCCGGTAGGGGAGCGGGTCGGAGGCGCTGAGCACCG
CGGCATCGTACGGTGCGGGC

Downstream 100 bases:

>100_bases
CCGGGTCGAGTCGGCGCGTCTTGCCCGGCTGGATGGGTCGAGTCGGCGCGTCTTGCCCGCCGGGGCGTACAAGATGCGCC
GACTCGGGGTTGCAGGGCGA

Product: putative spermidine synthase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MEACEIEPGDRPGSFVLRMSGLSQSHVDLDDPTRLAFDYVRRMADVVDAAAPPGAPVRVVHVGGAAMTLPRYVAVTRPGS
PQVVLEPASEVTELVRRELPLPRRSGIKVRGVDGRQGVAALRDAYAELVLLDAFADGRVPADLVTVEFFEDVARVLGAEG
LLVLNLTDRAPFGWTRRVVAGLRLVFGSVALGVEPATLRARRLGNLVVVASRGRVPTDALAARAASGSAPYRVLDGRQVS
DRFGGGTAFTDSDSAPSPAPDG

Sequences:

>Translated_262_residues
MEACEIEPGDRPGSFVLRMSGLSQSHVDLDDPTRLAFDYVRRMADVVDAAAPPGAPVRVVHVGGAAMTLPRYVAVTRPGS
PQVVLEPASEVTELVRRELPLPRRSGIKVRGVDGRQGVAALRDAYAELVLLDAFADGRVPADLVTVEFFEDVARVLGAEG
LLVLNLTDRAPFGWTRRVVAGLRLVFGSVALGVEPATLRARRLGNLVVVASRGRVPTDALAARAASGSAPYRVLDGRQVS
DRFGGGTAFTDSDSAPSPAPDG
>Mature_262_residues
MEACEIEPGDRPGSFVLRMSGLSQSHVDLDDPTRLAFDYVRRMADVVDAAAPPGAPVRVVHVGGAAMTLPRYVAVTRPGS
PQVVLEPASEVTELVRRELPLPRRSGIKVRGVDGRQGVAALRDAYAELVLLDAFADGRVPADLVTVEFFEDVARVLGAEG
LLVLNLTDRAPFGWTRRVVAGLRLVFGSVALGVEPATLRARRLGNLVVVASRGRVPTDALAARAASGSAPYRVLDGRQVS
DRFGGGTAFTDSDSAPSPAPDG

Specific function: Unknown

COG id: COG0421

COG function: function code E; Spermidine synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27672; Mature: 27672

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEACEIEPGDRPGSFVLRMSGLSQSHVDLDDPTRLAFDYVRRMADVVDAAAPPGAPVRVV
CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
HVGGAAMTLPRYVAVTRPGSPQVVLEPASEVTELVRRELPLPRRSGIKVRGVDGRQGVAA
EECCCHHHCCEEEEEECCCCCEEEECCHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHH
LRDAYAELVLLDAFADGRVPADLVTVEFFEDVARVLGAEGLLVLNLTDRAPFGWTRRVVA
HHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHH
GLRLVFGSVALGVEPATLRARRLGNLVVVASRGRVPTDALAARAASGSAPYRVLDGRQVS
HHHHHHHHHHCCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCCCEEEECCCCHH
DRFGGGTAFTDSDSAPSPAPDG
HHCCCCCEECCCCCCCCCCCCC
>Mature Secondary Structure
MEACEIEPGDRPGSFVLRMSGLSQSHVDLDDPTRLAFDYVRRMADVVDAAAPPGAPVRVV
CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
HVGGAAMTLPRYVAVTRPGSPQVVLEPASEVTELVRRELPLPRRSGIKVRGVDGRQGVAA
EECCCHHHCCEEEEEECCCCCEEEECCHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHH
LRDAYAELVLLDAFADGRVPADLVTVEFFEDVARVLGAEGLLVLNLTDRAPFGWTRRVVA
HHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHH
GLRLVFGSVALGVEPATLRARRLGNLVVVASRGRVPTDALAARAASGSAPYRVLDGRQVS
HHHHHHHHHHCCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCCCEEEECCCCHH
DRFGGGTAFTDSDSAPSPAPDG
HHCCCCCEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA