| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716703
Identifier: 119716703
GI number: 119716703
Start: 2644083
End: 2644439
Strand: Direct
Name: 119716703
Synonym: Noca_2477
Alternate gene names: NA
Gene position: 2644083-2644439 (Clockwise)
Preceding gene: 119716702
Following gene: 119716705
Centisome position: 53.03
GC content: 73.11
Gene sequence:
>357_bases ATGACCACGAAGAGGACCCAGGAGACCGCGACGACCGCCAACGAGGTGCGCCTCGTCGGAAGGATCTCCCAGGCACCCGC GGAGCGGGTGTTGCCCAGTGGCGACTCGGTCTGGACGTTCCGGGTCGTGGTGCCACGCTCGGCGCGCGAGCGATCCCGGC AGAGCGTGGATGCCGTGGAGTGCGCGGCCTGGTCGCCGCGGGCGCGCCGGTCGGTGAGCGGCTGGGGTGCCGACGACGTC GTGGAGGTGACCGGGTCCCTGCGGCGGCGCTTCTTCCGCGCCGGTGGTGCGGTGGTCTCCCGCGTCGAGGTCGAGATGGC GTCGGGGCGCGTCATCCGTCGCGCAGCGACCGGATGA
Upstream 100 bases:
>100_bases TCCACAGCGGCTCGCCGGACCCGGATCTCCCCAGCCCGACCGAGGCCGGGCCGGCACCGTCGGTGCGCTCGACCAGCGTG GGGCCCGGAGGTGGTGAGAG
Downstream 100 bases:
>100_bases GCACTCCCACGCTCGGCTTGGGCTGGAAGGAGGTGGCCTTCTCCGGGAGCAGCCGGTCCGCGCCCGCGATCGCGAGCACC TGAGAGACGTCGGGAGCGGG
Product: single-strand binding protein/primosomal replication protein n
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MTTKRTQETATTANEVRLVGRISQAPAERVLPSGDSVWTFRVVVPRSARERSRQSVDAVECAAWSPRARRSVSGWGADDV VEVTGSLRRRFFRAGGAVVSRVEVEMASGRVIRRAATG
Sequences:
>Translated_118_residues MTTKRTQETATTANEVRLVGRISQAPAERVLPSGDSVWTFRVVVPRSARERSRQSVDAVECAAWSPRARRSVSGWGADDV VEVTGSLRRRFFRAGGAVVSRVEVEMASGRVIRRAATG >Mature_117_residues TTKRTQETATTANEVRLVGRISQAPAERVLPSGDSVWTFRVVVPRSARERSRQSVDAVECAAWSPRARRSVSGWGADDVV EVTGSLRRRFFRAGGAVVSRVEVEMASGRVIRRAATG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12901; Mature: 12770
Theoretical pI: Translated: 12.14; Mature: 12.14
Prosite motif: PS50935 SSB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKRTQETATTANEVRLVGRISQAPAERVLPSGDSVWTFRVVVPRSARERSRQSVDAVE CCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCEEEEEEEECCCHHHHHHHCCCHHH CAAWSPRARRSVSGWGADDVVEVTGSLRRRFFRAGGAVVSRVEVEMASGRVIRRAATG HCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHEEHHCCEEEECCCCC >Mature Secondary Structure TTKRTQETATTANEVRLVGRISQAPAERVLPSGDSVWTFRVVVPRSARERSRQSVDAVE CCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCEEEEEEEECCCHHHHHHHCCCHHH CAAWSPRARRSVSGWGADDVVEVTGSLRRRFFRAGGAVVSRVEVEMASGRVIRRAATG HCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHEEHHCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA