| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716601
Identifier: 119716601
GI number: 119716601
Start: 2529785
End: 2530405
Strand: Direct
Name: 119716601
Synonym: Noca_2374
Alternate gene names: NA
Gene position: 2529785-2530405 (Clockwise)
Preceding gene: 119716600
Following gene: 119716603
Centisome position: 50.74
GC content: 72.79
Gene sequence:
>621_bases ATGCACGCACGTTCGATCACCTTCATGGGTGACCCCAGCCGGCTGGCCGCCGGCATCGACTACGTCCGCGACGACGTGAT GCCCATGCTCGACGCGATCGAGGGCTGCCTCGGGATGTCCATGCTCGCCGACCCCGAGACCGGCCAGGTGATCGTCACCA GCTCGTGGCGCTCGGCCGAGGACCTGGACGCGAGCGACCGGCTGCTGACAGGGAGCCGGGCCCGGGCCGCCGAGATCATG GGCGCCCCGCCCGAGGCGGCGGTGTGGGAGGTCGCGGTCATGCACCGCGACCACCGGGCCGCGGCGGGCTCGTGCTGCCG GGTCACCTGGCTGCGGCTCAACCACACCGACGTCGGGCGCGGCGTCGAGCTGTACCGCACCGCGCTGCTGCCCGCGATGG CCGAGCTGCCCGGGTTCTGCAGCGCGAGCCTCCTGGTGGACCGGAGGGCCGGCCGGGCATGCAGTACGACGACCTACGAC TCACGCGCGGCCATGGAGAGCAGCCGGGACCGCAGCTGGGCGATCCGGGACGCCGGCGTGCGCGAGTCGGGCGTCGACGT GATGGACGTGGCCGAGTTCGACCTGGTGCTGGCGCACCTGCACCTTCCCGAGCTGGTCTGA
Upstream 100 bases:
>100_bases CCGGCTGAGGTTGTTCGTTGCGGATCGGCTGACGGGGGAGGAGCGTGGTCACCGTCCGGCGACGCCATCCGGGCGCCGTC CCGAGGCGGGAGGCACAGCC
Downstream 100 bases:
>100_bases GCTGAGCCCGGCCGCGCGGCGAGCTCAGCGCACGCCGTACAGGTGCTCCAGGGCGAGCTGGTCGAGCTTCTCGAAGCCCA TGCCACGCTGGGCGGCCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MHARSITFMGDPSRLAAGIDYVRDDVMPMLDAIEGCLGMSMLADPETGQVIVTSSWRSAEDLDASDRLLTGSRARAAEIM GAPPEAAVWEVAVMHRDHRAAAGSCCRVTWLRLNHTDVGRGVELYRTALLPAMAELPGFCSASLLVDRRAGRACSTTTYD SRAAMESSRDRSWAIRDAGVRESGVDVMDVAEFDLVLAHLHLPELV
Sequences:
>Translated_206_residues MHARSITFMGDPSRLAAGIDYVRDDVMPMLDAIEGCLGMSMLADPETGQVIVTSSWRSAEDLDASDRLLTGSRARAAEIM GAPPEAAVWEVAVMHRDHRAAAGSCCRVTWLRLNHTDVGRGVELYRTALLPAMAELPGFCSASLLVDRRAGRACSTTTYD SRAAMESSRDRSWAIRDAGVRESGVDVMDVAEFDLVLAHLHLPELV >Mature_206_residues MHARSITFMGDPSRLAAGIDYVRDDVMPMLDAIEGCLGMSMLADPETGQVIVTSSWRSAEDLDASDRLLTGSRARAAEIM GAPPEAAVWEVAVMHRDHRAAAGSCCRVTWLRLNHTDVGRGVELYRTALLPAMAELPGFCSASLLVDRRAGRACSTTTYD SRAAMESSRDRSWAIRDAGVRESGVDVMDVAEFDLVLAHLHLPELV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv2558 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011008 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22375; Mature: 22375
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHARSITFMGDPSRLAAGIDYVRDDVMPMLDAIEGCLGMSMLADPETGQVIVTSSWRSAE CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEEECCCCCC DLDASDRLLTGSRARAAEIMGAPPEAAVWEVAVMHRDHRAAAGSCCRVTWLRLNHTDVGR CCCCCCCEECCCCHHHHHHCCCCCCHHHHHHHHHHCCCHHCCCCEEEEEEEEECCCCCCC GVELYRTALLPAMAELPGFCSASLLVDRRAGRACSTTTYDSRAAMESSRDRSWAIRDAGV CHHHHHHHHHHHHHHCCCCCCHHHHEECCCCCCCCCCCCCHHHHHHCCCCCCEEEECCCC RESGVDVMDVAEFDLVLAHLHLPELV CCCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MHARSITFMGDPSRLAAGIDYVRDDVMPMLDAIEGCLGMSMLADPETGQVIVTSSWRSAE CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEEECCCCCC DLDASDRLLTGSRARAAEIMGAPPEAAVWEVAVMHRDHRAAAGSCCRVTWLRLNHTDVGR CCCCCCCEECCCCHHHHHHCCCCCCHHHHHHHHHHCCCHHCCCCEEEEEEEEECCCCCCC GVELYRTALLPAMAELPGFCSASLLVDRRAGRACSTTTYDSRAAMESSRDRSWAIRDAGV CHHHHHHHHHHHHHHCCCCCCHHHHEECCCCCCCCCCCCCHHHHHHCCCCCCEEEECCCC RESGVDVMDVAEFDLVLAHLHLPELV CCCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]