| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716589
Identifier: 119716589
GI number: 119716589
Start: 2518163
End: 2518804
Strand: Direct
Name: 119716589
Synonym: Noca_2362
Alternate gene names: NA
Gene position: 2518163-2518804 (Clockwise)
Preceding gene: 119716584
Following gene: 119716591
Centisome position: 50.51
GC content: 75.55
Gene sequence:
>642_bases ATGAAGGGCACACCGGAACGGGTCATCGAGAGTCGGGCGATGCGGCGTTACCGCGCCGGCTGGAACGGCGTCGTCATCCT GCTGGTCGCCGTGGGGACCGCGGCGGGCTCCGTCGCCATCGGCTGGGCGCCGCTCGTGGGCATCACGGCGTGTCTGGCCG TGCTCGGCGCCGCGTTCGGTGTCGCCTGGGTCGAGCCCGACGGCGACCGTCGGCTGGCCGCCACGACCGGCGCACGCTAC GGCGCCGCCGCCGCGACGATCCTCGGCGGGTTCCCGGCGCTGATCGACGGCTGGACCGCCCTGGTGCTGATCACGACGAC CCTGACCGCGCCGCCGATCCTCGAGCAGCTGCGGCGCAGCCTGCACGGCAAGAGCGCTCCGGGCGCCGTCGACGATCCCA CTCGGCTGAGCGAGCGCGACCTGGCCGAGCGGTGGCGCTCGTCGTACGACGAGGTGCACCGCGCCGACGCGACGCCTCGG GAGCTGCTCGACGTGATCGCGGAGCGCGGGCGCCTGCTCGACGAGCTGGAGCGTCGCGACCCGCGCCGGTTCCGCGCCTG GCTGGCCGCGACCGCGGAGACCAAACCGGGGCCGCGACCGGGCAGCAAGCCCGGCAGCCAGCCCGGGGCTCAGGGCCGGT AG
Upstream 100 bases:
>100_bases CGCGGCCCGGTCCCGCACGGAGCAGGCGAGGGACGGACGTCCCAGGTGCGGCGCACTTTCGGCCCTGCCGGGTCCGGCGG CCGCGGCGGATCGTGAGGGC
Downstream 100 bases:
>100_bases GCCCGGTTGGGCACCACCACCGCCCGCCCGTCGATCTCGCCGCGGGCCAGCTCGGCGTAGACCTCGGGTGCCTGCGCGAG CTCGAAGGTCGTGGTGTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MKGTPERVIESRAMRRYRAGWNGVVILLVAVGTAAGSVAIGWAPLVGITACLAVLGAAFGVAWVEPDGDRRLAATTGARY GAAAATILGGFPALIDGWTALVLITTTLTAPPILEQLRRSLHGKSAPGAVDDPTRLSERDLAERWRSSYDEVHRADATPR ELLDVIAERGRLLDELERRDPRRFRAWLAATAETKPGPRPGSKPGSQPGAQGR
Sequences:
>Translated_213_residues MKGTPERVIESRAMRRYRAGWNGVVILLVAVGTAAGSVAIGWAPLVGITACLAVLGAAFGVAWVEPDGDRRLAATTGARY GAAAATILGGFPALIDGWTALVLITTTLTAPPILEQLRRSLHGKSAPGAVDDPTRLSERDLAERWRSSYDEVHRADATPR ELLDVIAERGRLLDELERRDPRRFRAWLAATAETKPGPRPGSKPGSQPGAQGR >Mature_213_residues MKGTPERVIESRAMRRYRAGWNGVVILLVAVGTAAGSVAIGWAPLVGITACLAVLGAAFGVAWVEPDGDRRLAATTGARY GAAAATILGGFPALIDGWTALVLITTTLTAPPILEQLRRSLHGKSAPGAVDDPTRLSERDLAERWRSSYDEVHRADATPR ELLDVIAERGRLLDELERRDPRRFRAWLAATAETKPGPRPGSKPGSQPGAQGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22748; Mature: 22748
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGTPERVIESRAMRRYRAGWNGVVILLVAVGTAAGSVAIGWAPLVGITACLAVLGAAFG CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC VAWVEPDGDRRLAATTGARYGAAAATILGGFPALIDGWTALVLITTTLTAPPILEQLRRS CEEECCCCCCEEEHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LHGKSAPGAVDDPTRLSERDLAERWRSSYDEVHRADATPRELLDVIAERGRLLDELERRD HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC PRRFRAWLAATAETKPGPRPGSKPGSQPGAQGR HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKGTPERVIESRAMRRYRAGWNGVVILLVAVGTAAGSVAIGWAPLVGITACLAVLGAAFG CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC VAWVEPDGDRRLAATTGARYGAAAATILGGFPALIDGWTALVLITTTLTAPPILEQLRRS CEEECCCCCCEEEHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LHGKSAPGAVDDPTRLSERDLAERWRSSYDEVHRADATPRELLDVIAERGRLLDELERRD HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC PRRFRAWLAATAETKPGPRPGSKPGSQPGAQGR HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA