| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716464
Identifier: 119716464
GI number: 119716464
Start: 2384514
End: 2385362
Strand: Direct
Name: 119716464
Synonym: Noca_2237
Alternate gene names: NA
Gene position: 2384514-2385362 (Clockwise)
Preceding gene: 119716460
Following gene: 119716465
Centisome position: 47.83
GC content: 74.79
Gene sequence:
>849_bases GTGAGCACCCAGACCTCAAGCCGCCCGGTCGGGGTCGACGAGCTCAAGCGGGCCTGGGACGCCGTGAACGCCGGCGAGTT CCGCACCGGCGTCGGCGCCGGCAAGGGACCCCGCGGCCGCAGCATCGCCGCCGCGGACGACTGGTCGCCAGCCGCGGGGG AGCACACCATCGCTGTGATCGGATGCGCCGGGTCGGTGGGAGCCAGCACCATCGCCCTGGCTGTCGGCCTGGCTGCCGCC GGCCCGGTCCGGGTGATCGAGTGCTGCTCGGTCACCGCTTCTGGTCTCGCCGCGGCGAGCACCGCCGAGCTCGGCCTGCA CCCGACCGACTGGCGTCAGGGCAAGCGCGACCACGTCCTGCTCGAGCGGGCCAGCGAGGTCCTCGCCGGCGTCGACGAGA TCCCGCTGCCGATTGACGCCGAGAACGAGACCCAGCTGACCATCCTCGACGTCGGCTGGGAGGCCGGCCAGCTGCTGGCC ACCGACTGCTGGCTCGCCGAGGCCGTCCGCACCGCCGACCAGGTCGTCCTGGTCACCACAGCCACCGTCCCGGGGATGCG CCGCGTCTCGGTCGCCCTCGAGCTGCTGGCCAACCACTGGCAGCCCGAGCAGATCACCCTCGCCGTGCGCGGTCCGCGCC GCAAGAAGTGGCCCCGGGGCCTCGAGCACGCCGGCGGCCCCGCCGTACGCCGCGCCCTGGTCGCGGACCGGTGCGTGGAG ATCCCCGAGGACCGCGACCTCGCGGTCAACGGCCTGGACTCCCGGCCCGTCCCGGCCCCCCTCATCTCGGCAGCCCGTCA GCTGCTCGCGCCCGCCCACCTGCCCGCCGACACCAGCGAAAGCGCCTGA
Upstream 100 bases:
>100_bases TGCACGAGGTCCAGGCCGCCAAGGCACAGCTGGCAAGCCTGACCCCGGCTGAGGTCCGCGCCGCGCTTGAGTTCCGCCGC GGCGGCATCGGGGAGGCTCA
Downstream 100 bases:
>100_bases CCCGCACCGGGTCAGCAACCCCAGAAAGGAAGTCCACCCATGGACGTCATGACCGCTCTCCTCCCGATGGCCGCCCAGGT CTGCCCGAAGGCGCCGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MSTQTSSRPVGVDELKRAWDAVNAGEFRTGVGAGKGPRGRSIAAADDWSPAAGEHTIAVIGCAGSVGASTIALAVGLAAA GPVRVIECCSVTASGLAAASTAELGLHPTDWRQGKRDHVLLERASEVLAGVDEIPLPIDAENETQLTILDVGWEAGQLLA TDCWLAEAVRTADQVVLVTTATVPGMRRVSVALELLANHWQPEQITLAVRGPRRKKWPRGLEHAGGPAVRRALVADRCVE IPEDRDLAVNGLDSRPVPAPLISAARQLLAPAHLPADTSESA
Sequences:
>Translated_282_residues MSTQTSSRPVGVDELKRAWDAVNAGEFRTGVGAGKGPRGRSIAAADDWSPAAGEHTIAVIGCAGSVGASTIALAVGLAAA GPVRVIECCSVTASGLAAASTAELGLHPTDWRQGKRDHVLLERASEVLAGVDEIPLPIDAENETQLTILDVGWEAGQLLA TDCWLAEAVRTADQVVLVTTATVPGMRRVSVALELLANHWQPEQITLAVRGPRRKKWPRGLEHAGGPAVRRALVADRCVE IPEDRDLAVNGLDSRPVPAPLISAARQLLAPAHLPADTSESA >Mature_281_residues STQTSSRPVGVDELKRAWDAVNAGEFRTGVGAGKGPRGRSIAAADDWSPAAGEHTIAVIGCAGSVGASTIALAVGLAAAG PVRVIECCSVTASGLAAASTAELGLHPTDWRQGKRDHVLLERASEVLAGVDEIPLPIDAENETQLTILDVGWEAGQLLAT DCWLAEAVRTADQVVLVTTATVPGMRRVSVALELLANHWQPEQITLAVRGPRRKKWPRGLEHAGGPAVRRALVADRCVEI PEDRDLAVNGLDSRPVPAPLISAARQLLAPAHLPADTSESA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29440; Mature: 29308
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTQTSSRPVGVDELKRAWDAVNAGEFRTGVGAGKGPRGRSIAAADDWSPAAGEHTIAVI CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEE GCAGSVGASTIALAVGLAAAGPVRVIECCSVTASGLAAASTAELGLHPTDWRQGKRDHVL ECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHCCCHHHHH LERASEVLAGVDEIPLPIDAENETQLTILDVGWEAGQLLATDCWLAEAVRTADQVVLVTT HHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEE ATVPGMRRVSVALELLANHWQPEQITLAVRGPRRKKWPRGLEHAGGPAVRRALVADRCVE CCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHC IPEDRDLAVNGLDSRPVPAPLISAARQLLAPAHLPADTSESA CCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure STQTSSRPVGVDELKRAWDAVNAGEFRTGVGAGKGPRGRSIAAADDWSPAAGEHTIAVI CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEE GCAGSVGASTIALAVGLAAAGPVRVIECCSVTASGLAAASTAELGLHPTDWRQGKRDHVL ECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHCCCHHHHH LERASEVLAGVDEIPLPIDAENETQLTILDVGWEAGQLLATDCWLAEAVRTADQVVLVTT HHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEE ATVPGMRRVSVALELLANHWQPEQITLAVRGPRRKKWPRGLEHAGGPAVRRALVADRCVE CCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHC IPEDRDLAVNGLDSRPVPAPLISAARQLLAPAHLPADTSESA CCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA