| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is 119716460
Identifier: 119716460
GI number: 119716460
Start: 2378239
End: 2379138
Strand: Direct
Name: 119716460
Synonym: Noca_2232
Alternate gene names: NA
Gene position: 2378239-2379138 (Clockwise)
Preceding gene: 119716459
Following gene: 119716464
Centisome position: 47.7
GC content: 67.89
Gene sequence:
>900_bases ATGCTGAGGCGGCTCCTCGCTCTCGCGCTGACGGTCGCGGCGTCGCTGGTTGTCGTGTTGTTCACCGCGTCGAGCGCAAG TGCGGAGTGCGTCGAGGTCTACAACCCGGAGACAGGCCAGTTTGAGCTTGACTGTTCGGACGGCGGCGGCGATCCCGGAG GGAGCGGCGACAACGGCGGTGGAGGTTCGTCAACCTGCTCGTACGCGGGCAACGAGATCCCATGCACCGGACCGGACGGG TCGGTGTGGAGTAGTGCTCATGGGTGCTACGTGGGGGAGGCCTACCCGGCGGATGAGACCGAGCCACCGCCTGGTCAGAC CGAGGAGGACGGCGCCTGGCACGTCTGCTACTTCCCGCCGCCGGGGTCCTCGTGGGAGCTGATGTGGATCGAGAACGGCA CGGTGACGATCGACCCGGTGGTCCTTGCGAACCGAGCGATCGCCTCGATGGACCTGGACCCGATCACGATCGGGATCGTC CCCGAGTCGGGCCCCAACCGGGTCGGTCTCGTCGGTCTGCCGGTGTGGATGTGGGTGGACAGCCCGACTGGCGACACGTT CGGCCCGATCACCGCCTCAGCCAGCGAGGGCACGGTCTCGGTCAGCGCGACCGCCAGCGTCTCCAGCATCGTGTGGAATA TGGGTGACGGCAACAAGGTGACCTGCGCCGGGAAGGGGACGCCGTACGCCGATCACTACGGGAAGCAGGACTCCCCGACC TGCGGGCACCGCTACGCGAAGATGTCGACCGACCAGCCCGAGGGTGCGTACCAGGTCACCGCGACGAGCCACTGGGTGGT CGAGTGGACCGGTGGCGGCCAGTCCGGAACCATCGAGTTCGACCTGGCCACCGAGCCCCTCCCGATCCGCATCGGGGAGG CCCAGGTGCTGACCCAGTGA
Upstream 100 bases:
>100_bases ACGGGGATCCGCTGGGCAACCCCCTTCCTGTCGAGTACACCCTGGTCAAGGACAAGGGAGCGTGGAAGGTTTCCAAGTCC GACATCAAATGGGATCAGTC
Downstream 100 bases:
>100_bases CCCTGTACTAGCAGACCGACCACCGACACAGGTCCCCGTCCTCACAGCAGGAAGGGGACCTGTGTCGTTCGCTGCCCGAG CGCGCCCGGAGGCACCCGGC
Product: putative atp/GTP-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MLRRLLALALTVAASLVVVLFTASSASAECVEVYNPETGQFELDCSDGGGDPGGSGDNGGGGSSTCSYAGNEIPCTGPDG SVWSSAHGCYVGEAYPADETEPPPGQTEEDGAWHVCYFPPPGSSWELMWIENGTVTIDPVVLANRAIASMDLDPITIGIV PESGPNRVGLVGLPVWMWVDSPTGDTFGPITASASEGTVSVSATASVSSIVWNMGDGNKVTCAGKGTPYADHYGKQDSPT CGHRYAKMSTDQPEGAYQVTATSHWVVEWTGGGQSGTIEFDLATEPLPIRIGEAQVLTQ
Sequences:
>Translated_299_residues MLRRLLALALTVAASLVVVLFTASSASAECVEVYNPETGQFELDCSDGGGDPGGSGDNGGGGSSTCSYAGNEIPCTGPDG SVWSSAHGCYVGEAYPADETEPPPGQTEEDGAWHVCYFPPPGSSWELMWIENGTVTIDPVVLANRAIASMDLDPITIGIV PESGPNRVGLVGLPVWMWVDSPTGDTFGPITASASEGTVSVSATASVSSIVWNMGDGNKVTCAGKGTPYADHYGKQDSPT CGHRYAKMSTDQPEGAYQVTATSHWVVEWTGGGQSGTIEFDLATEPLPIRIGEAQVLTQ >Mature_299_residues MLRRLLALALTVAASLVVVLFTASSASAECVEVYNPETGQFELDCSDGGGDPGGSGDNGGGGSSTCSYAGNEIPCTGPDG SVWSSAHGCYVGEAYPADETEPPPGQTEEDGAWHVCYFPPPGSSWELMWIENGTVTIDPVVLANRAIASMDLDPITIGIV PESGPNRVGLVGLPVWMWVDSPTGDTFGPITASASEGTVSVSATASVSSIVWNMGDGNKVTCAGKGTPYADHYGKQDSPT CGHRYAKMSTDQPEGAYQVTATSHWVVEWTGGGQSGTIEFDLATEPLPIRIGEAQVLTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31012; Mature: 31012
Theoretical pI: Translated: 3.87; Mature: 3.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRRLLALALTVAASLVVVLFTASSASAECVEVYNPETGQFELDCSDGGGDPGGSGDNGG CHHHHHHHHHHHHHHHEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCC GGSSTCSYAGNEIPCTGPDGSVWSSAHGCYVGEAYPADETEPPPGQTEEDGAWHVCYFPP CCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEECC PGSSWELMWIENGTVTIDPVVLANRAIASMDLDPITIGIVPESGPNRVGLVGLPVWMWVD CCCCEEEEEEECCCEEECCEEECCCEEEECCCCEEEEEEEECCCCCEEEEEEEEEEEEEE SPTGDTFGPITASASEGTVSVSATASVSSIVWNMGDGNKVTCAGKGTPYADHYGKQDSPT CCCCCCCCCEEECCCCCEEEEEECCCEEEEEEECCCCCEEEECCCCCCCHHHCCCCCCCC CGHRYAKMSTDQPEGAYQVTATSHWVVEWTGGGQSGTIEFDLATEPLPIRIGEAQVLTQ CCCEEEECCCCCCCCCEEEEECCEEEEEEECCCCCCEEEEEECCCCCEEEECCEEEECC >Mature Secondary Structure MLRRLLALALTVAASLVVVLFTASSASAECVEVYNPETGQFELDCSDGGGDPGGSGDNGG CHHHHHHHHHHHHHHHEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCC GGSSTCSYAGNEIPCTGPDGSVWSSAHGCYVGEAYPADETEPPPGQTEEDGAWHVCYFPP CCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEECC PGSSWELMWIENGTVTIDPVVLANRAIASMDLDPITIGIVPESGPNRVGLVGLPVWMWVD CCCCEEEEEEECCCEEECCEEECCCEEEECCCCEEEEEEEECCCCCEEEEEEEEEEEEEE SPTGDTFGPITASASEGTVSVSATASVSSIVWNMGDGNKVTCAGKGTPYADHYGKQDSPT CCCCCCCCCEEECCCCCEEEEEECCCEEEEEEECCCCCEEEECCCCCCCHHHCCCCCCCC CGHRYAKMSTDQPEGAYQVTATSHWVVEWTGGGQSGTIEFDLATEPLPIRIGEAQVLTQ CCCEEEECCCCCCCCCEEEEECCEEEEEEECCCCCCEEEEEECCCCCEEEECCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA