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The map label for this gene is 119716423

Identifier: 119716423

GI number: 119716423

Start: 2343927

End: 2344583

Strand: Direct

Name: 119716423

Synonym: Noca_2194

Alternate gene names: NA

Gene position: 2343927-2344583 (Clockwise)

Preceding gene: 119716418

Following gene: 119716425

Centisome position: 47.01

GC content: 66.36

Gene sequence:

>657_bases
ATGCACGTCGACGCTGAGAGGTGTCTGCGCGTCGATGCGGAGCGGAACCGCGAGCGCGTCATCCACGCGGCACGCGAGGT
CTTTGCCGAGCAGGGGCTTGAGGCCTCGACCAACGAGATCGCCCGTCATGCCGGGGTCGGTGTTGCCACACTCTTCCGTC
GTTTCCCGACCCGAGACGAGCTGGTCGCGGCGGCGTTCGCCGACAAGATGAACGCCTACGTCAGCGCCGTCGACGACGCG
CTCGCCGACCCTGATCCATGGCATGGCTTCTGCGCCTACATCGAACGCGTCTGCCGCATGCAGGCCGACGACCGCGGCTT
CGCCGACGTCCTCACCATGACCTTCCCTACCGCCAAGGCATTCGAAGAGGAACGCAGAAGGTCCGCCGAGGCGCTGACCG
AGCTGCTCGAACGCGCGAAAGCCACCGGCCGGCTCCGCGAGGACTTCGCCCACCAGGACGTGCCCCTGATCCTGATGGCC
AACGCTGGCGTCGTCACCGCCACCAAGGACGCCGCCCCTGAGGCATGGCGTCGCTTCGTCGGCTACCTCATCCAGTCCTT
TGCCGCCGAGGCCGCTCAGCCCCTCCCGGACCCGCCCACGCATCGTCAGATGTACCGAGCGCTCATGCGACTGACGAAGA
CATCAAGAAAAAGTTGA

Upstream 100 bases:

>100_bases
ACGGTCGCTCCACTTGCATGGCAATCTATCAGACAAGTGAAGTTGCTGTTCCACTTGCGCGTAGAGTAGGGCCATGTCGC
GTGAGTCGGGTCCCGGACAG

Downstream 100 bases:

>100_bases
CAGCTCAGTTGGGTCGCCGACCATCGCTGCCGGGGGACTCGTAGTTCCGTGGTTTGCCGAACACCGGTCGCACCCGCACG
CTCAGTGGGCACTTCGACCC

Product: regulatory protein TetR

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; TetR-Family Transcriptional Regulator; TetR Family Transcriptional Regulatory Protein; TetR-Type Regulator; Transcription Regulator Protein; HTH-Type Transcriptional Regulator; LOW QUALITY PROTEIN TetR Family Transcriptional Regulator; Transcriptional Regulatory Protein; Transcription Regulator Protein Tetr Family; TetR Family Regulator; Transcriptional Regulator Protein; Transcription Regulator; Tetr Family Transcriptional Regulator

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MHVDAERCLRVDAERNRERVIHAAREVFAEQGLEASTNEIARHAGVGVATLFRRFPTRDELVAAAFADKMNAYVSAVDDA
LADPDPWHGFCAYIERVCRMQADDRGFADVLTMTFPTAKAFEEERRRSAEALTELLERAKATGRLREDFAHQDVPLILMA
NAGVVTATKDAAPEAWRRFVGYLIQSFAAEAAQPLPDPPTHRQMYRALMRLTKTSRKS

Sequences:

>Translated_218_residues
MHVDAERCLRVDAERNRERVIHAAREVFAEQGLEASTNEIARHAGVGVATLFRRFPTRDELVAAAFADKMNAYVSAVDDA
LADPDPWHGFCAYIERVCRMQADDRGFADVLTMTFPTAKAFEEERRRSAEALTELLERAKATGRLREDFAHQDVPLILMA
NAGVVTATKDAAPEAWRRFVGYLIQSFAAEAAQPLPDPPTHRQMYRALMRLTKTSRKS
>Mature_218_residues
MHVDAERCLRVDAERNRERVIHAAREVFAEQGLEASTNEIARHAGVGVATLFRRFPTRDELVAAAFADKMNAYVSAVDDA
LADPDPWHGFCAYIERVCRMQADDRGFADVLTMTFPTAKAFEEERRRSAEALTELLERAKATGRLREDFAHQDVPLILMA
NAGVVTATKDAAPEAWRRFVGYLIQSFAAEAAQPLPDPPTHRQMYRALMRLTKTSRKS

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24491; Mature: 24491

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVDAERCLRVDAERNRERVIHAAREVFAEQGLEASTNEIARHAGVGVATLFRRFPTRDE
CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHCCCHHH
LVAAAFADKMNAYVSAVDDALADPDPWHGFCAYIERVCRMQADDRGFADVLTMTFPTAKA
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHH
FEEERRRSAEALTELLERAKATGRLREDFAHQDVPLILMANAGVVTATKDAAPEAWRRFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEECCCCCCHHHHHHHH
GYLIQSFAAEAAQPLPDPPTHRQMYRALMRLTKTSRKS
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHVDAERCLRVDAERNRERVIHAAREVFAEQGLEASTNEIARHAGVGVATLFRRFPTRDE
CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHCCCHHH
LVAAAFADKMNAYVSAVDDALADPDPWHGFCAYIERVCRMQADDRGFADVLTMTFPTAKA
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHH
FEEERRRSAEALTELLERAKATGRLREDFAHQDVPLILMANAGVVTATKDAAPEAWRRFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEECCCCCCHHHHHHHH
GYLIQSFAAEAAQPLPDPPTHRQMYRALMRLTKTSRKS
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA