Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

Click here to switch to the map view.

The map label for this gene is 119716392

Identifier: 119716392

GI number: 119716392

Start: 2311697

End: 2312212

Strand: Reverse

Name: 119716392

Synonym: Noca_2161

Alternate gene names: NA

Gene position: 2312212-2311697 (Counterclockwise)

Preceding gene: 119716393

Following gene: 119716389

Centisome position: 46.38

GC content: 65.7

Gene sequence:

>516_bases
ATGAAGGATGATCCAAAGCCGAGCCGCGCTGGCGTCCTCCATGCGGTGATCGAGGAGATCCTCGCCCGCAATGACGGGCA
GATTCCCACCGACATCGTCGGCATCGACACCCTCTTCGATGGCATCGAAGACCTCGCGAACGCTCTTCTGCTCCGATGGC
ACACACGCCTGGTGGCATCGCTGGAACGAGGGCTCGCCGACGAACCCGAGGACCGCGAGGACTCCGTCATCGAGGCATGG
CAGCACGCCAACTGGATCTACCGGGGCGTCCGGAAGGTCATCGACGACCTCGCGGACCACCCGCCCAACGCGGAAGTTGC
ACACGCCGTCCGCGCAACCGCACGCAACGACTGGGCCGCCATGGCCCTCGCGGCCGGGCTGGCCAGTGCTTTCGATGAAC
CAGCTGTCCGAGTCGGACACCGTCTCGAACTCGAAGCGCGGCGCCGCCTGAGGCTTGCAACACACCCGGAGGCCCGCAAA
CGACGATCCTGGAAGCCCGTTGCCTGGATGGGATAG

Upstream 100 bases:

>100_bases
GACTCAGCGGTGCGACTCCGCTCCGGGCCGATCCGCGGGTACTCCTCGCTGCCCCTGCGATAGGACACGCGCACACCGCA
TCCTCAGGAAGGGGACACCC

Downstream 100 bases:

>100_bases
TGCAGGCGGGTTCACCAGATGTAGCGACCTGCCGTGCGCTATCGAGGAGTCAAGCTTGTCGAGGGTCTCGACGTCCGCAC
GCCTCCCGCCCAGACCCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MKDDPKPSRAGVLHAVIEEILARNDGQIPTDIVGIDTLFDGIEDLANALLLRWHTRLVASLERGLADEPEDREDSVIEAW
QHANWIYRGVRKVIDDLADHPPNAEVAHAVRATARNDWAAMALAAGLASAFDEPAVRVGHRLELEARRRLRLATHPEARK
RRSWKPVAWMG

Sequences:

>Translated_171_residues
MKDDPKPSRAGVLHAVIEEILARNDGQIPTDIVGIDTLFDGIEDLANALLLRWHTRLVASLERGLADEPEDREDSVIEAW
QHANWIYRGVRKVIDDLADHPPNAEVAHAVRATARNDWAAMALAAGLASAFDEPAVRVGHRLELEARRRLRLATHPEARK
RRSWKPVAWMG
>Mature_171_residues
MKDDPKPSRAGVLHAVIEEILARNDGQIPTDIVGIDTLFDGIEDLANALLLRWHTRLVASLERGLADEPEDREDSVIEAW
QHANWIYRGVRKVIDDLADHPPNAEVAHAVRATARNDWAAMALAAGLASAFDEPAVRVGHRLELEARRRLRLATHPEARK
RRSWKPVAWMG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19166; Mature: 19166

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDDPKPSRAGVLHAVIEEILARNDGQIPTDIVGIDTLFDGIEDLANALLLRWHTRLVAS
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LERGLADEPEDREDSVIEAWQHANWIYRGVRKVIDDLADHPPNAEVAHAVRATARNDWAA
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHH
MALAAGLASAFDEPAVRVGHRLELEARRRLRLATHPEARKRRSWKPVAWMG
HHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHCCCCCHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKDDPKPSRAGVLHAVIEEILARNDGQIPTDIVGIDTLFDGIEDLANALLLRWHTRLVAS
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LERGLADEPEDREDSVIEAWQHANWIYRGVRKVIDDLADHPPNAEVAHAVRATARNDWAA
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHH
MALAAGLASAFDEPAVRVGHRLELEARRRLRLATHPEARKRRSWKPVAWMG
HHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHCCCCCHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA