| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is livK [C]
Identifier: 119716379
GI number: 119716379
Start: 2297087
End: 2298259
Strand: Reverse
Name: livK [C]
Synonym: Noca_2148
Alternate gene names: 119716379
Gene position: 2298259-2297087 (Counterclockwise)
Preceding gene: 119716380
Following gene: 119716378
Centisome position: 46.1
GC content: 64.28
Gene sequence:
>1173_bases ATGACCCACAAGAAGAGGGCCTTGGCGCTAGTTGTCGCCGCTCTCACCGTGATGACGAGCGCCGCATGCGGCAGCAGCGA AAACTCCGGAGACAGCGCCTCTGATGCCATCAAGATCGGTGCCGTCTTCAACCTGACTGGCGACGGGTCCGTGCTCGGCG CCGACGAGATCCGAGGCGCCGAGGCGTTCGTCAAGCAGATCAACGCCGACGGCGGTCTCCTCGGTCGCGACGTCGAGCTC ATCACCATCGACGCTGCATCTGACCCGCAGAAGGCCGCAGACGCAGTGGCTCGACTCGCGGAGCAGGAGCAGGTCTCGGT CATCATCGGCCCTGACGGTACGCCGACCACGATCGCAGCCATTCCCGCAGCGACTCGCGCGCAGACTCCACTTGTCTCCA CGGGCGGATCCTGGTCGTACGGCATGTCTGGCGACGACCTGGAGTGGGCCTTCACGGCAACCCCCCCGACGACCGCGGGA CTGGACGCCTACGAGGAGTACTGGGCCAGCATCGGAGTGGAGAAGGTTGCAATCATCGGGGCCGACACGCCCTTCCTCGA CGTGCCGAAGGGCTACTTCGAGAACAAGACCGATGGCGTCGAGTTGACCACCCTTCAGAGTTTCTCGCCGGGCGCCACTG ACATTACGGCGCAGATGACCACGGTTCTCGACTCCGACCCGGACTTCGTTCTCAGTTGGTCGACTGGCCCCGACGGTGTC ACTGCGCTTAAGGCCCTCGACTCGCTAGCCCCTGACATGCCGCGGGGACTCAACGGCGGCACAACAACCACGGCCTTCGA AGAGATCGCCGGAGACCTTCTGGAGGGGACGACTGCTTGGAGCTACCGCTCCCAGGTCGTCGACACGCTGCCCGCCGGCC CTGGCAAGGATGCCGTTCAGGCGTACCTCGACGGGATGGAGGCGGCCGGTGAGGACACCGTCGGTGGAGCTAGCAACGCA ATCATGGCGTGGGACGCCATGATCAGTGCTACCGACGCAATTGAGGCTGCCGATTCCACGGACCCGAGTGAGGTCCGTGA CGCCCTGGAGATCCAAAGCTTTGAAGGTGCGATCACACCGTGGAAGCGCACTCCTGACGATCACGCCGGCGCACTGGGCG GGTACGTCCTGGTGAAGTACGACGATGGTCAGTGGCACCCCATCGACGAATAG
Upstream 100 bases:
>100_bases TGGAGCCGTTGTGGCCACACGTGAGGACTGTCACTGTAATGCGCCAGTGACCGACCTCACAGTCACGTCCGCTCTCGGAA CACGCCTAGGGAGAACACGA
Downstream 100 bases:
>100_bases TAAAAACCCGAGTCCGATCCAGATTGAGGTTGAGAGTTGCATACCTTTTGGGTCCTGCTAGTCGCAGGCATCACAAGTGG CGCGGTATATGGCCTACTCG
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: None
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MTHKKRALALVVAALTVMTSAACGSSENSGDSASDAIKIGAVFNLTGDGSVLGADEIRGAEAFVKQINADGGLLGRDVEL ITIDAASDPQKAADAVARLAEQEQVSVIIGPDGTPTTIAAIPAATRAQTPLVSTGGSWSYGMSGDDLEWAFTATPPTTAG LDAYEEYWASIGVEKVAIIGADTPFLDVPKGYFENKTDGVELTTLQSFSPGATDITAQMTTVLDSDPDFVLSWSTGPDGV TALKALDSLAPDMPRGLNGGTTTTAFEEIAGDLLEGTTAWSYRSQVVDTLPAGPGKDAVQAYLDGMEAAGEDTVGGASNA IMAWDAMISATDAIEAADSTDPSEVRDALEIQSFEGAITPWKRTPDDHAGALGGYVLVKYDDGQWHPIDE
Sequences:
>Translated_390_residues MTHKKRALALVVAALTVMTSAACGSSENSGDSASDAIKIGAVFNLTGDGSVLGADEIRGAEAFVKQINADGGLLGRDVEL ITIDAASDPQKAADAVARLAEQEQVSVIIGPDGTPTTIAAIPAATRAQTPLVSTGGSWSYGMSGDDLEWAFTATPPTTAG LDAYEEYWASIGVEKVAIIGADTPFLDVPKGYFENKTDGVELTTLQSFSPGATDITAQMTTVLDSDPDFVLSWSTGPDGV TALKALDSLAPDMPRGLNGGTTTTAFEEIAGDLLEGTTAWSYRSQVVDTLPAGPGKDAVQAYLDGMEAAGEDTVGGASNA IMAWDAMISATDAIEAADSTDPSEVRDALEIQSFEGAITPWKRTPDDHAGALGGYVLVKYDDGQWHPIDE >Mature_389_residues THKKRALALVVAALTVMTSAACGSSENSGDSASDAIKIGAVFNLTGDGSVLGADEIRGAEAFVKQINADGGLLGRDVELI TIDAASDPQKAADAVARLAEQEQVSVIIGPDGTPTTIAAIPAATRAQTPLVSTGGSWSYGMSGDDLEWAFTATPPTTAGL DAYEEYWASIGVEKVAIIGADTPFLDVPKGYFENKTDGVELTTLQSFSPGATDITAQMTTVLDSDPDFVLSWSTGPDGVT ALKALDSLAPDMPRGLNGGTTTTAFEEIAGDLLEGTTAWSYRSQVVDTLPAGPGKDAVQAYLDGMEAAGEDTVGGASNAI MAWDAMISATDAIEAADSTDPSEVRDALEIQSFEGAITPWKRTPDDHAGALGGYVLVKYDDGQWHPIDE
Specific function: This Protein Is A Component Of The Leucine-Specific Transport System, Which Is One Of The Two Periplasmic Binding Protein-Dependent Transport Systems Of The High-Affinity Transport Of The Branched-Chain Amino Acids In E.Coli. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40345; Mature: 40214
Theoretical pI: Translated: 3.81; Mature: 3.81
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHKKRALALVVAALTVMTSAACGSSENSGDSASDAIKIGAVFNLTGDGSVLGADEIRGA CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCCEECHHHHHHH EAFVKQINADGGLLGRDVELITIDAASDPQKAADAVARLAEQEQVSVIIGPDGTPTTIAA HHHHHHHCCCCCEECCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEE IPAATRAQTPLVSTGGSWSYGMSGDDLEWAFTATPPTTAGLDAYEEYWASIGVEKVAIIG CCCCCCCCCCEEECCCCEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEE ADTPFLDVPKGYFENKTDGVELTTLQSFSPGATDITAQMTTVLDSDPDFVLSWSTGPDGV CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCHH TALKALDSLAPDMPRGLNGGTTTTAFEEIAGDLLEGTTAWSYRSQVVDTLPAGPGKDAVQ HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHH AYLDGMEAAGEDTVGGASNAIMAWDAMISATDAIEAADSTDPSEVRDALEIQSFEGAITP HHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC WKRTPDDHAGALGGYVLVKYDDGQWHPIDE CCCCCCHHCCCCCCEEEEEEECCCCCCCCC >Mature Secondary Structure THKKRALALVVAALTVMTSAACGSSENSGDSASDAIKIGAVFNLTGDGSVLGADEIRGA CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCCEECHHHHHHH EAFVKQINADGGLLGRDVELITIDAASDPQKAADAVARLAEQEQVSVIIGPDGTPTTIAA HHHHHHHCCCCCEECCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEE IPAATRAQTPLVSTGGSWSYGMSGDDLEWAFTATPPTTAGLDAYEEYWASIGVEKVAIIG CCCCCCCCCCEEECCCCEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEE ADTPFLDVPKGYFENKTDGVELTTLQSFSPGATDITAQMTTVLDSDPDFVLSWSTGPDGV CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCHH TALKALDSLAPDMPRGLNGGTTTTAFEEIAGDLLEGTTAWSYRSQVVDTLPAGPGKDAVQ HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHH AYLDGMEAAGEDTVGGASNAIMAWDAMISATDAIEAADSTDPSEVRDALEIQSFEGAITP HHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC WKRTPDDHAGALGGYVLVKYDDGQWHPIDE CCCCCCHHCCCCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA