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The map label for this gene is slyA [C]

Identifier: 119716374

GI number: 119716374

Start: 2291785

End: 2292429

Strand: Direct

Name: slyA [C]

Synonym: Noca_2143

Alternate gene names: 119716374

Gene position: 2291785-2292429 (Clockwise)

Preceding gene: 119716363

Following gene: 119716384

Centisome position: 45.97

GC content: 62.79

Gene sequence:

>645_bases
GTGTCTTCGGAGCGAAGGAGCAGTCCCATCAGTCGCTCGCCAGATGCCCCGGCGTCCACCAGCCCGAAGGAAGGGGCACG
TCCTCGACGAACCGTCGAAAGCCTCGCACGTCAGATAGACCTCGTGCGCACTGAATACGGTCACGACTTCGACGTGCTGC
CCCTGAAGACCCTCCTACTCCTGCACCGCATCATCGCCACCGTGAGCCGCGCAGAAGGCATCGAACTGGGCCCGTCCAAA
CTGAACGGCACCTACTTCAACATCCTCACCGTTCTGCATCGCTGCCCTGGACCGATTTCAATGAAGGAACTGGCCGAAGC
CCTCTCAGTGCAGCCCCCGAACCTCACTGGCGCAGTGCGAGACCTCATCGATCGAGGCCTGCTGGCTCGCAACGAGAACC
CCGAGGACCGACGCTCCTACACCGTGGGCATCGCGCCAAGAGGCGAAAACCTGTTGAGCGCGCTACTGCCAGGTCACTGG
TCGATGCTCTCAGTCATCTTCTCAAGTCTCTCGCACGACGAACTCGACGTCCTCTCCGGGCTGCTCGAGCGCGTGCTCGC
AGACATCGCGGATCCGCTCGGCCCCAAGGGCCTAAAGCCCACCCTTCACGACGCCGCGAACCACACCGCTAGCGACACCA
CCTGA

Upstream 100 bases:

>100_bases
GAGTGCTCGGACCCGTGCGTCGACCTGGGCGCTGGTATACCTTGTGGCCTTGTCGCGACCGGTCGCCCGTCGCCGCGCGA
CCCCCGCAGTTGAAGGTCAA

Downstream 100 bases:

>100_bases
GCTGCGAGTCGTCGCCCCGGTTGGTCACAGACCGCAAGGTGGCGCGACGGAGTTGAGCTGTCCGTCGGCCGAGGAGTCAA
CGCCGCCAGCGTCGAATCCC

Product: regulatory protein MarR

Products: NA

Alternate protein names: Regulatory Protein MarR; Transcriptional Regulator MarR Family

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MSSERRSSPISRSPDAPASTSPKEGARPRRTVESLARQIDLVRTEYGHDFDVLPLKTLLLLHRIIATVSRAEGIELGPSK
LNGTYFNILTVLHRCPGPISMKELAEALSVQPPNLTGAVRDLIDRGLLARNENPEDRRSYTVGIAPRGENLLSALLPGHW
SMLSVIFSSLSHDELDVLSGLLERVLADIADPLGPKGLKPTLHDAANHTASDTT

Sequences:

>Translated_214_residues
MSSERRSSPISRSPDAPASTSPKEGARPRRTVESLARQIDLVRTEYGHDFDVLPLKTLLLLHRIIATVSRAEGIELGPSK
LNGTYFNILTVLHRCPGPISMKELAEALSVQPPNLTGAVRDLIDRGLLARNENPEDRRSYTVGIAPRGENLLSALLPGHW
SMLSVIFSSLSHDELDVLSGLLERVLADIADPLGPKGLKPTLHDAANHTASDTT
>Mature_213_residues
SSERRSSPISRSPDAPASTSPKEGARPRRTVESLARQIDLVRTEYGHDFDVLPLKTLLLLHRIIATVSRAEGIELGPSKL
NGTYFNILTVLHRCPGPISMKELAEALSVQPPNLTGAVRDLIDRGLLARNENPEDRRSYTVGIAPRGENLLSALLPGHWS
MLSVIFSSLSHDELDVLSGLLERVLADIADPLGPKGLKPTLHDAANHTASDTT

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23247; Mature: 23116

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSERRSSPISRSPDAPASTSPKEGARPRRTVESLARQIDLVRTEYGHDFDVLPLKTLLL
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LHRIIATVSRAEGIELGPSKLNGTYFNILTVLHRCPGPISMKELAEALSVQPPNLTGAVR
HHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHH
DLIDRGLLARNENPEDRRSYTVGIAPRGENLLSALLPGHWSMLSVIFSSLSHDELDVLSG
HHHHHHHHHCCCCCHHHHCEEEECCCCCHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHH
LLERVLADIADPLGPKGLKPTLHDAANHTASDTT
HHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCC
>Mature Secondary Structure 
SSERRSSPISRSPDAPASTSPKEGARPRRTVESLARQIDLVRTEYGHDFDVLPLKTLLL
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LHRIIATVSRAEGIELGPSKLNGTYFNILTVLHRCPGPISMKELAEALSVQPPNLTGAVR
HHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHH
DLIDRGLLARNENPEDRRSYTVGIAPRGENLLSALLPGHWSMLSVIFSSLSHDELDVLSG
HHHHHHHHHCCCCCHHHHCEEEECCCCCHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHH
LLERVLADIADPLGPKGLKPTLHDAANHTASDTT
HHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA