| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716346
Identifier: 119716346
GI number: 119716346
Start: 2260606
End: 2261691
Strand: Reverse
Name: 119716346
Synonym: Noca_2115
Alternate gene names: NA
Gene position: 2261691-2260606 (Counterclockwise)
Preceding gene: 119716355
Following gene: 119716345
Centisome position: 45.36
GC content: 73.66
Gene sequence:
>1086_bases ATGTCTCAAGCCTGGACAGCGCTCGCAGCCCTCGTGCTGAGCGTCGTGATCCCATCGAGCGCGGCCGCTCAGGCGACCGA CCGGCAGGAACCCGCGGAACGGGGGAACCATCGCGAGACGGTCCGCCCGGGTGACACCCGGCGGGCCGAGGCGGTCAAGG TCGGGTGGTGGTGGGTGGCCAACGAGCCACCGCCCGACACCGGCCTGCTCGCGGCTCCGCAGCCTCCGTCGCCGAATGTG CCCAAGGGGGCGATCCCGGTCGGTGCCGTGGCCGGCGATCCGGAGAAGGTCGCGGCCGTCGAGGTGCGGTTGGCGGCCGA CCCCGGGTCGAGCGTGCGTGCCTTCGAGATGGTGCTGCGCGAGAGCGCCGTGCCGGGAGCGAACGCCAACGCCGAGGCGG CGCAGATCCTGGCCTGCCCGGTGACCGAGCTGTTCTGGGCCGACGGGGCCGCCGCAGCATGGAAGGACCAGCCGAGCTAC GACTGCGACCTCGCGTCGGCGAAGGGCAAGCGGACCGAGAAAGGCCTGTGGCACTTCGACCTCTCAGAGGTCGCATCGGG CTGGCTGGCCGAAGGCAGCACCGCCTCGCAGTCGGTGGTCCTCGTCGAGGACGTGGCCGCGCCGGAGTCCTTCCAGGTGA CGTTCGACGGCATCAAGGACAAGGGAGTGGGCCTGGCGCTGAAGGCAGGCGAGCCGCCGGCCTTGCCGGAGGGCACGCCG CCGGCTCCCGGATCGGAGAGCCTCGGAGGTGGTGAGGGCAGTCCCTCGTTCGTCGACGGTGGGCCGTCGCTGGACGGCGG CGGTGTCGACGTCGCTCCCCTGGCCGCGGATGCCCCTCCGGTGGCGGACCAGCAGCCGGCTGCTGGGGACGAGACGACGC CGTCGGCGGTCAGCCCGGTGGCCTCCGTGGCCGCCGTGCCCGCGTGGTACTCCGGGATGCCTCGAGCCGCGTTCCTACTG GTGCCCCTCGCCCTTGCGCTGGCCTACCTCGTCATGCTGTCCCTCGGGCCGGCCGGGCGGCCGGCGCCCGCCACCGGACG CCACGGCGTGAGCCGGGCGCTCGACCGGTTGGCGGCCCGCCGATGA
Upstream 100 bases:
>100_bases CACTCCTGGCCGACGCGCGTAACGCGCTGAGTGGCGGATCGTTAGGCGCGCCAAGGAGGTTCGGCCTTCATCCAGGGGGT TCGGCCTTCCAGGAGAACCC
Downstream 100 bases:
>100_bases GCGCGCGGGGACGACGCGTCGTCGCGGTCGCGTTCTGCGCGGCCCTCGCCGTCACCACCGGCTGCGGGCAGAAGGCCGGC GTCGACCAGATGTACGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MSQAWTALAALVLSVVIPSSAAAQATDRQEPAERGNHRETVRPGDTRRAEAVKVGWWWVANEPPPDTGLLAAPQPPSPNV PKGAIPVGAVAGDPEKVAAVEVRLAADPGSSVRAFEMVLRESAVPGANANAEAAQILACPVTELFWADGAAAAWKDQPSY DCDLASAKGKRTEKGLWHFDLSEVASGWLAEGSTASQSVVLVEDVAAPESFQVTFDGIKDKGVGLALKAGEPPALPEGTP PAPGSESLGGGEGSPSFVDGGPSLDGGGVDVAPLAADAPPVADQQPAAGDETTPSAVSPVASVAAVPAWYSGMPRAAFLL VPLALALAYLVMLSLGPAGRPAPATGRHGVSRALDRLAARR
Sequences:
>Translated_361_residues MSQAWTALAALVLSVVIPSSAAAQATDRQEPAERGNHRETVRPGDTRRAEAVKVGWWWVANEPPPDTGLLAAPQPPSPNV PKGAIPVGAVAGDPEKVAAVEVRLAADPGSSVRAFEMVLRESAVPGANANAEAAQILACPVTELFWADGAAAAWKDQPSY DCDLASAKGKRTEKGLWHFDLSEVASGWLAEGSTASQSVVLVEDVAAPESFQVTFDGIKDKGVGLALKAGEPPALPEGTP PAPGSESLGGGEGSPSFVDGGPSLDGGGVDVAPLAADAPPVADQQPAAGDETTPSAVSPVASVAAVPAWYSGMPRAAFLL VPLALALAYLVMLSLGPAGRPAPATGRHGVSRALDRLAARR >Mature_360_residues SQAWTALAALVLSVVIPSSAAAQATDRQEPAERGNHRETVRPGDTRRAEAVKVGWWWVANEPPPDTGLLAAPQPPSPNVP KGAIPVGAVAGDPEKVAAVEVRLAADPGSSVRAFEMVLRESAVPGANANAEAAQILACPVTELFWADGAAAAWKDQPSYD CDLASAKGKRTEKGLWHFDLSEVASGWLAEGSTASQSVVLVEDVAAPESFQVTFDGIKDKGVGLALKAGEPPALPEGTPP APGSESLGGGEGSPSFVDGGPSLDGGGVDVAPLAADAPPVADQQPAAGDETTPSAVSPVASVAAVPAWYSGMPRAAFLLV PLALALAYLVMLSLGPAGRPAPATGRHGVSRALDRLAARR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36661; Mature: 36530
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQAWTALAALVLSVVIPSSAAAQATDRQEPAERGNHRETVRPGDTRRAEAVKVGWWWVA CCHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCEEEEEEEEEC NEPPPDTGLLAAPQPPSPNVPKGAIPVGAVAGDPEKVAAVEVRLAADPGSSVRAFEMVLR CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHH ESAVPGANANAEAAQILACPVTELFWADGAAAAWKDQPSYDCDLASAKGKRTEKGLWHFD HHCCCCCCCCCCHHHEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC LSEVASGWLAEGSTASQSVVLVEDVAAPESFQVTFDGIKDKGVGLALKAGEPPALPEGTP HHHHHCCHHCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCC PAPGSESLGGGEGSPSFVDGGPSLDGGGVDVAPLAADAPPVADQQPAAGDETTPSAVSPV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHH ASVAAVPAWYSGMPRAAFLLVPLALALAYLVMLSLGPAGRPAPATGRHGVSRALDRLAAR HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC R C >Mature Secondary Structure SQAWTALAALVLSVVIPSSAAAQATDRQEPAERGNHRETVRPGDTRRAEAVKVGWWWVA CHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCEEEEEEEEEC NEPPPDTGLLAAPQPPSPNVPKGAIPVGAVAGDPEKVAAVEVRLAADPGSSVRAFEMVLR CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHH ESAVPGANANAEAAQILACPVTELFWADGAAAAWKDQPSYDCDLASAKGKRTEKGLWHFD HHCCCCCCCCCCHHHEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC LSEVASGWLAEGSTASQSVVLVEDVAAPESFQVTFDGIKDKGVGLALKAGEPPALPEGTP HHHHHCCHHCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCC PAPGSESLGGGEGSPSFVDGGPSLDGGGVDVAPLAADAPPVADQQPAAGDETTPSAVSPV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHH ASVAAVPAWYSGMPRAAFLLVPLALALAYLVMLSLGPAGRPAPATGRHGVSRALDRLAAR HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA