Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119716317

Identifier: 119716317

GI number: 119716317

Start: 2228897

End: 2230105

Strand: Reverse

Name: 119716317

Synonym: Noca_2086

Alternate gene names: NA

Gene position: 2230105-2228897 (Counterclockwise)

Preceding gene: 119716319

Following gene: 119716314

Centisome position: 44.73

GC content: 70.8

Gene sequence:

>1209_bases
ATGACCCGCGCCGGAAGGCTGACTGCCGCCGTGGCCTTGGCCATGGTGCTCACGGCCTGTGCGAGCACGTCCGGCGAGAA
GACCGACCCCGCGGAGAGCCCCTCGCCTGCGGTCACGACCGATCCGGCCGTCCAGCCGCAGGGCACCGCGATCCGCCGCG
GACCGTCCGCGCTGGACGATCCCGCCGATCCGGACCTCCCCACCCCCCTGATCGACGTCGAGGATCTGATGTCGGGCGGG
CCGCCACCCGACGGCATCCCTGCCATCGACCACCCCGTCTTCGAGCCCGTGGCCGACGTCGACTGGCTCAAGCCCGACGA
GCCGGTCATGTCCCTCACGGTGTCCGGGGTGACCAAGGCGTACCCGATTCGGATCATGACCTGGCACGAGATCGTCAACG
ACCGCCTGGGCGGCGTCCCGGTCGCGGTGACCTATTGCCCGCTGTGCAACTCCGGTGTCGCGTTCGAGCGGACCGTCCGC
GGGCACGTCACCACCTTCGGCACCTCAGGGCTGTTGTACGCCGACAACCTCGTCATGTACGACCGGCTCACCGAGTCGTT
GTGGCCCCAGCTCACCGGCCAGGCATCGGTCGGCACCCTGACCGGCACCCAGCTCATGAGCATCCCGATGGGCACGGTGG
GCTGGGCACAGTTCCGCGCCGAGCATCCAGACGCCGTCGTCCTCAGCCGGACGACAGGGTACGAGCGGCCCTACGGCAGC
AACCCCTACTTCAGGTACGACGACCCGGGCTCCGATCCGTTGTTCGAGGTGCCCGGCGGGACCGACGCCCGGCTGCCCGC
GAAGACCAGGGTGGTCGGTGTCGGCGATGGGGAGCAGGCGGTGGCGATACGTCGCGACCTCCTGGCGCAGACGGGGGTCC
AGCACGTGACGCTCGGGTCGGAGCGGGTGGTGCTGTGGCACGTCGCCGGACAGCGTTCGGCGCTGGACACCGCCGCGATC
CCCGAGGGCCAGGAGATCGGCACGGTCGCGGCCTTCGAGGCCAGTGCGGCGGGACGCCCGCTCGACTTCGTCGACGCCGA
GGACGGCACCTTCCGGGACGAGCAGACCGGCTCGAGCTGGAACGTCTTCGGTCGCGCCGCCGACGGCCCCCTCCGGGGAC
AACAGCTTCGCGCCATCGCCTACCAGGACACCTTCTGGTTCGCCTGGGTGGCGTTCCAGCCCGAGACGGCCCTGATCACC
GGGCCCTGA

Upstream 100 bases:

>100_bases
GACCTGCCCGAGGCTCCCCGCGCCGCTATGTGACCGCGCTCACCGAAGGCTGGGACCAAGCGGACCTACGCTGCGGCATG
CGAACGCTGGCACGGAGCGC

Downstream 100 bases:

>100_bases
TCACCGAAGCGCGCCGGCCGTCAACAGCATCGCGCCGAGGACCGACCCGACCGTCGGGTAGGCGGCGGTCATCGACGTCG
CCCGAGCTGGTGCGCAGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MTRAGRLTAAVALAMVLTACASTSGEKTDPAESPSPAVTTDPAVQPQGTAIRRGPSALDDPADPDLPTPLIDVEDLMSGG
PPPDGIPAIDHPVFEPVADVDWLKPDEPVMSLTVSGVTKAYPIRIMTWHEIVNDRLGGVPVAVTYCPLCNSGVAFERTVR
GHVTTFGTSGLLYADNLVMYDRLTESLWPQLTGQASVGTLTGTQLMSIPMGTVGWAQFRAEHPDAVVLSRTTGYERPYGS
NPYFRYDDPGSDPLFEVPGGTDARLPAKTRVVGVGDGEQAVAIRRDLLAQTGVQHVTLGSERVVLWHVAGQRSALDTAAI
PEGQEIGTVAAFEASAAGRPLDFVDAEDGTFRDEQTGSSWNVFGRAADGPLRGQQLRAIAYQDTFWFAWVAFQPETALIT
GP

Sequences:

>Translated_402_residues
MTRAGRLTAAVALAMVLTACASTSGEKTDPAESPSPAVTTDPAVQPQGTAIRRGPSALDDPADPDLPTPLIDVEDLMSGG
PPPDGIPAIDHPVFEPVADVDWLKPDEPVMSLTVSGVTKAYPIRIMTWHEIVNDRLGGVPVAVTYCPLCNSGVAFERTVR
GHVTTFGTSGLLYADNLVMYDRLTESLWPQLTGQASVGTLTGTQLMSIPMGTVGWAQFRAEHPDAVVLSRTTGYERPYGS
NPYFRYDDPGSDPLFEVPGGTDARLPAKTRVVGVGDGEQAVAIRRDLLAQTGVQHVTLGSERVVLWHVAGQRSALDTAAI
PEGQEIGTVAAFEASAAGRPLDFVDAEDGTFRDEQTGSSWNVFGRAADGPLRGQQLRAIAYQDTFWFAWVAFQPETALIT
GP
>Mature_401_residues
TRAGRLTAAVALAMVLTACASTSGEKTDPAESPSPAVTTDPAVQPQGTAIRRGPSALDDPADPDLPTPLIDVEDLMSGGP
PPDGIPAIDHPVFEPVADVDWLKPDEPVMSLTVSGVTKAYPIRIMTWHEIVNDRLGGVPVAVTYCPLCNSGVAFERTVRG
HVTTFGTSGLLYADNLVMYDRLTESLWPQLTGQASVGTLTGTQLMSIPMGTVGWAQFRAEHPDAVVLSRTTGYERPYGSN
PYFRYDDPGSDPLFEVPGGTDARLPAKTRVVGVGDGEQAVAIRRDLLAQTGVQHVTLGSERVVLWHVAGQRSALDTAAIP
EGQEIGTVAAFEASAAGRPLDFVDAEDGTFRDEQTGSSWNVFGRAADGPLRGQQLRAIAYQDTFWFAWVAFQPETALITG
P

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42797; Mature: 42666

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRAGRLTAAVALAMVLTACASTSGEKTDPAESPSPAVTTDPAVQPQGTAIRRGPSALDD
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC
PADPDLPTPLIDVEDLMSGGPPPDGIPAIDHPVFEPVADVDWLKPDEPVMSLTVSGVTKA
CCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCEEEEEECCCCCC
YPIRIMTWHEIVNDRLGGVPVAVTYCPLCNSGVAFERTVRGHVTTFGTSGLLYADNLVMY
CCEEEEEHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCEEEEECCCCEEEECCCHHH
DRLTESLWPQLTGQASVGTLTGTQLMSIPMGTVGWAQFRAEHPDAVVLSRTTGYERPYGS
HHHHHHHHHHHCCCCCCCEECCCEEEECCCCCCCHHHHHCCCCCEEEEEECCCCCCCCCC
NPYFRYDDPGSDPLFEVPGGTDARLPAKTRVVGVGDGEQAVAIRRDLLAQTGVQHVTLGS
CCCEECCCCCCCCCEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEECC
ERVVLWHVAGQRSALDTAAIPEGQEIGTVAAFEASAAGRPLDFVDAEDGTFRDEQTGSSW
CEEEEEEECCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCC
NVFGRAADGPLRGQQLRAIAYQDTFWFAWVAFQPETALITGP
EEEEECCCCCCCCCEEEEEEEECCEEEEEEEECCCEEEEECC
>Mature Secondary Structure 
TRAGRLTAAVALAMVLTACASTSGEKTDPAESPSPAVTTDPAVQPQGTAIRRGPSALDD
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC
PADPDLPTPLIDVEDLMSGGPPPDGIPAIDHPVFEPVADVDWLKPDEPVMSLTVSGVTKA
CCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCEEEEEECCCCCC
YPIRIMTWHEIVNDRLGGVPVAVTYCPLCNSGVAFERTVRGHVTTFGTSGLLYADNLVMY
CCEEEEEHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCEEEEECCCCEEEECCCHHH
DRLTESLWPQLTGQASVGTLTGTQLMSIPMGTVGWAQFRAEHPDAVVLSRTTGYERPYGS
HHHHHHHHHHHCCCCCCCEECCCEEEECCCCCCCHHHHHCCCCCEEEEEECCCCCCCCCC
NPYFRYDDPGSDPLFEVPGGTDARLPAKTRVVGVGDGEQAVAIRRDLLAQTGVQHVTLGS
CCCEECCCCCCCCCEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEECC
ERVVLWHVAGQRSALDTAAIPEGQEIGTVAAFEASAAGRPLDFVDAEDGTFRDEQTGSSW
CEEEEEEECCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCC
NVFGRAADGPLRGQQLRAIAYQDTFWFAWVAFQPETALITGP
EEEEECCCCCCCCCEEEEEEEECCEEEEEEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA