| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is merA [H]
Identifier: 119716304
GI number: 119716304
Start: 2218202
End: 2219578
Strand: Reverse
Name: merA [H]
Synonym: Noca_2073
Alternate gene names: 119716304
Gene position: 2219578-2218202 (Counterclockwise)
Preceding gene: 119716305
Following gene: 119716289
Centisome position: 44.52
GC content: 73.35
Gene sequence:
>1377_bases GTGACCGGGCCGACGACCCGGGCCGACATCGTGGTGGTCGGCATGGGTGTCGGTGGCGAGGCCGTCGCCGGCTCCCTCGC CGAGGCCGGTCTCGACGTGGTCGGCATCGAGGCCGAGCTTGTCGGCGGCGAGTGCCCCTACTGGGGTTGCATCCCCAGCA AGATGATGATCCGCGCGGCCAACCTGATCGCCGAGGCGAGCCGGATCCCCGGCATGTCCGGCACCGTCGACGTACGACCC GACTGGACGCCGGTCGCCGACCGGATCCGCCACGAGGCCACCGACGACTGGAACGACCAGGTCGCCGTCGACCGATTCAC CGGCAAGGGGGGCCGCTTCGTGCGCGGCGCGGCGACCGTCCTGGGGCCCCGCAGCGTGTCCGTCGAGGGCGTCGGCGTGA TCGAGGCGCGGCGTGGGATCGTGCTCGCCACCGGCACCAGCTCGGTCGCGCCGCCCATCGACGGGCTGGCGGACACGCCG TTCTGGACGAACCGCGAGGCGGTCAGCGCCAAGGACCTGCCCGCCTCCCTCGTCGTCCTCGGCGGCGGCGCGATCGGCGT GGAGATCGGCCAGGCCTTCGCCCGGTTCGAGGTGGAGGTCACGGTCGTCGAGGCAGCCGAACGCATCCTGCCGGCCGAGG AGCCGGAGGTGTCCGCGCTGCTGGCAGACACCTTCCGATCCGAGGGGATCACCGTCCTTGCCGGCCGAGCTGCCACCCAG GTCGGCTACGCCGGCGGTACGTTCGCGATCCGGCTCGACAACGGTGACGATGTCACCGCGGAAGGGCTGCTGGTCGCCAC CGGCCGGCGGCCGCAGGTCGCACCCGAGATGCTCCGGGCCCTCGAGCTCGAACCGGGCCTGCGGGCCCTGCCGGTCGATG AGCGGATGCGGGTCGCGGACGGGGTCTGGGCGGTCGGCGACGTCACCGGCAAGGGTGCCTTCACCCATGTCGCGACCTAT CAGGCCGACCTCGTCGTCGCCGACGTCCTCGGCCGTCCGACGCCCGAGGCGGAGTACCGCGCGCTGCCTCGGGTGACGTT CACCGACCCCGAGGTCGGGTCGGTCGGCCTGAGCGAGGCACAGGCCCGCGAGCAGGGCCTGGCGGTCGCGGTCGGCACCG CGAACCTGCAGCACACCGCCCGGGGCTGGCTGCACAAGGCCGGCAGCCACGGCCTGATCAAGCTGGTCATGGACACCGAC ACCGGGCTGTTGGTCGGCGCCACGTCCGCGGGTCCGGTCGGCGGCGAGGTGCTCGGCGCCCTGGCGGTCGCCATCCACGG CCGGGTGCCGGTCGAGCAGCTGCGCCACATGATCTGGGCCTACCCGACCTTCCACCGCGGGATCCAGGACGCCCTGCGCG ACCTGCCGATCGGGTGA
Upstream 100 bases:
>100_bases GGTACTACCCCTCGCCGTCGCCGGCAGCTGAGGAGATCGGCGGGCGCGTCGCCTTCTGGCAGGGCGTCCGGGTCGTCGAG GCGCCGGCCGAGGCAGCACG
Downstream 100 bases:
>100_bases GGGCACCAGCCGGCGCCGGCTCAGGATCAACCCGGCGACTCGGCCACGGCTCGCACCTCGGAGAACGGCGTAGGCGACCG CCCGGCCCGAGTCGAGCAGC
Product: pyridine nucleotide-disulfide oxidoreductase dimerisation region
Products: NA
Alternate protein names: Hg(II) reductase [H]
Number of amino acids: Translated: 458; Mature: 457
Protein sequence:
>458_residues MTGPTTRADIVVVGMGVGGEAVAGSLAEAGLDVVGIEAELVGGECPYWGCIPSKMMIRAANLIAEASRIPGMSGTVDVRP DWTPVADRIRHEATDDWNDQVAVDRFTGKGGRFVRGAATVLGPRSVSVEGVGVIEARRGIVLATGTSSVAPPIDGLADTP FWTNREAVSAKDLPASLVVLGGGAIGVEIGQAFARFEVEVTVVEAAERILPAEEPEVSALLADTFRSEGITVLAGRAATQ VGYAGGTFAIRLDNGDDVTAEGLLVATGRRPQVAPEMLRALELEPGLRALPVDERMRVADGVWAVGDVTGKGAFTHVATY QADLVVADVLGRPTPEAEYRALPRVTFTDPEVGSVGLSEAQAREQGLAVAVGTANLQHTARGWLHKAGSHGLIKLVMDTD TGLLVGATSAGPVGGEVLGALAVAIHGRVPVEQLRHMIWAYPTFHRGIQDALRDLPIG
Sequences:
>Translated_458_residues MTGPTTRADIVVVGMGVGGEAVAGSLAEAGLDVVGIEAELVGGECPYWGCIPSKMMIRAANLIAEASRIPGMSGTVDVRP DWTPVADRIRHEATDDWNDQVAVDRFTGKGGRFVRGAATVLGPRSVSVEGVGVIEARRGIVLATGTSSVAPPIDGLADTP FWTNREAVSAKDLPASLVVLGGGAIGVEIGQAFARFEVEVTVVEAAERILPAEEPEVSALLADTFRSEGITVLAGRAATQ VGYAGGTFAIRLDNGDDVTAEGLLVATGRRPQVAPEMLRALELEPGLRALPVDERMRVADGVWAVGDVTGKGAFTHVATY QADLVVADVLGRPTPEAEYRALPRVTFTDPEVGSVGLSEAQAREQGLAVAVGTANLQHTARGWLHKAGSHGLIKLVMDTD TGLLVGATSAGPVGGEVLGALAVAIHGRVPVEQLRHMIWAYPTFHRGIQDALRDLPIG >Mature_457_residues TGPTTRADIVVVGMGVGGEAVAGSLAEAGLDVVGIEAELVGGECPYWGCIPSKMMIRAANLIAEASRIPGMSGTVDVRPD WTPVADRIRHEATDDWNDQVAVDRFTGKGGRFVRGAATVLGPRSVSVEGVGVIEARRGIVLATGTSSVAPPIDGLADTPF WTNREAVSAKDLPASLVVLGGGAIGVEIGQAFARFEVEVTVVEAAERILPAEEPEVSALLADTFRSEGITVLAGRAATQV GYAGGTFAIRLDNGDDVTAEGLLVATGRRPQVAPEMLRALELEPGLRALPVDERMRVADGVWAVGDVTGKGAFTHVATYQ ADLVVADVLGRPTPEAEYRALPRVTFTDPEVGSVGLSEAQAREQGLAVAVGTANLQHTARGWLHKAGSHGLIKLVMDTDT GLLVGATSAGPVGGEVLGALAVAIHGRVPVEQLRHMIWAYPTFHRGIQDALRDLPIG
Specific function: Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0) [H]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HMA domain [H]
Homologues:
Organism=Homo sapiens, GI91199540, Length=465, Percent_Identity=27.3118279569892, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI22035672, Length=441, Percent_Identity=25.8503401360544, Blast_Score=76, Evalue=7e-14, Organism=Homo sapiens, GI50301238, Length=441, Percent_Identity=22.9024943310658, Blast_Score=69, Evalue=9e-12, Organism=Escherichia coli, GI87081717, Length=448, Percent_Identity=27.9017857142857, Blast_Score=147, Evalue=1e-36, Organism=Escherichia coli, GI1786307, Length=483, Percent_Identity=26.2939958592132, Blast_Score=144, Evalue=8e-36, Organism=Escherichia coli, GI87082354, Length=450, Percent_Identity=25.5555555555556, Blast_Score=114, Evalue=1e-26, Organism=Escherichia coli, GI1789915, Length=345, Percent_Identity=26.3768115942029, Blast_Score=85, Evalue=8e-18, Organism=Caenorhabditis elegans, GI32565766, Length=464, Percent_Identity=26.5086206896552, Blast_Score=136, Evalue=3e-32, Organism=Caenorhabditis elegans, GI71983419, Length=357, Percent_Identity=28.5714285714286, Blast_Score=71, Evalue=9e-13, Organism=Caenorhabditis elegans, GI71983429, Length=357, Percent_Identity=28.5714285714286, Blast_Score=71, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6321091, Length=470, Percent_Identity=24.6808510638298, Blast_Score=110, Evalue=5e-25, Organism=Saccharomyces cerevisiae, GI6325240, Length=392, Percent_Identity=23.9795918367347, Blast_Score=74, Evalue=5e-14, Organism=Drosophila melanogaster, GI21358499, Length=468, Percent_Identity=26.2820512820513, Blast_Score=129, Evalue=3e-30, Organism=Drosophila melanogaster, GI24640549, Length=465, Percent_Identity=26.6666666666667, Blast_Score=79, Evalue=7e-15, Organism=Drosophila melanogaster, GI24640553, Length=465, Percent_Identity=26.6666666666667, Blast_Score=79, Evalue=8e-15, Organism=Drosophila melanogaster, GI24640551, Length=465, Percent_Identity=26.6666666666667, Blast_Score=79, Evalue=8e-15, Organism=Drosophila melanogaster, GI17737741, Length=471, Percent_Identity=26.1146496815287, Blast_Score=77, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR017969 - InterPro: IPR006121 - InterPro: IPR000815 - InterPro: IPR021179 - InterPro: IPR004099 - InterPro: IPR012999 - InterPro: IPR001327 [H]
Pfam domain/function: PF00403 HMA; PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.16.1.1 [H]
Molecular weight: Translated: 47650; Mature: 47519
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGPTTRADIVVVGMGVGGEAVAGSLAEAGLDVVGIEAELVGGECPYWGCIPSKMMIRAA CCCCCCCCCEEEEEECCCCHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHH NLIAEASRIPGMSGTVDVRPDWTPVADRIRHEATDDWNDQVAVDRFTGKGGRFVRGAATV HHHHHHHHCCCCCCEEECCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEECCEEE LGPRSVSVEGVGVIEARRGIVLATGTSSVAPPIDGLADTPFWTNREAVSAKDLPASLVVL ECCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE GGGAIGVEIGQAFARFEVEVTVVEAAERILPAEEPEVSALLADTFRSEGITVLAGRAATQ ECCEEEHHHHHHEEEEEEEEEEEHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEECCCHHC VGYAGGTFAIRLDNGDDVTAEGLLVATGRRPQVAPEMLRALELEPGLRALPVDERMRVAD CCCCCCEEEEEECCCCCCEECCEEEECCCCCCHHHHHHHHHCCCCCCEECCCCHHHHHHC GVWAVGDVTGKGAFTHVATYQADLVVADVLGRPTPEAEYRALPRVTFTDPEVGSVGLSEA CEEEEECCCCCCCEEEEEEEHHHEEEEHHHCCCCCCHHHHCCCEEEECCCCCCCCCCHHH QAREQGLAVAVGTANLQHTARGWLHKAGSHGLIKLVMDTDTGLLVGATSAGPVGGEVLGA HHHHCCCEEEEECCCHHHHHHHHHHCCCCCCEEEEEEECCCCEEEECCCCCCCCHHHHHH LAVAIHGRVPVEQLRHMIWAYPTFHRGIQDALRDLPIG HHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure TGPTTRADIVVVGMGVGGEAVAGSLAEAGLDVVGIEAELVGGECPYWGCIPSKMMIRAA CCCCCCCCEEEEEECCCCHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHH NLIAEASRIPGMSGTVDVRPDWTPVADRIRHEATDDWNDQVAVDRFTGKGGRFVRGAATV HHHHHHHHCCCCCCEEECCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEECCEEE LGPRSVSVEGVGVIEARRGIVLATGTSSVAPPIDGLADTPFWTNREAVSAKDLPASLVVL ECCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE GGGAIGVEIGQAFARFEVEVTVVEAAERILPAEEPEVSALLADTFRSEGITVLAGRAATQ ECCEEEHHHHHHEEEEEEEEEEEHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEECCCHHC VGYAGGTFAIRLDNGDDVTAEGLLVATGRRPQVAPEMLRALELEPGLRALPVDERMRVAD CCCCCCEEEEEECCCCCCEECCEEEECCCCCCHHHHHHHHHCCCCCCEECCCCHHHHHHC GVWAVGDVTGKGAFTHVATYQADLVVADVLGRPTPEAEYRALPRVTFTDPEVGSVGLSEA CEEEEECCCCCCCEEEEEEEHHHEEEEHHHCCCCCCHHHHCCCEEEECCCCCCCCCCHHH QAREQGLAVAVGTANLQHTARGWLHKAGSHGLIKLVMDTDTGLLVGATSAGPVGGEVLGA HHHHCCCEEEEECCCHHHHHHHHHHCCCCCCEEEEEEECCCCEEEECCCCCCCCHHHHHH LAVAIHGRVPVEQLRHMIWAYPTFHRGIQDALRDLPIG HHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2691338; 2265748 [H]