Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

Click here to switch to the map view.

The map label for this gene is 119716285

Identifier: 119716285

GI number: 119716285

Start: 2198566

End: 2199711

Strand: Direct

Name: 119716285

Synonym: Noca_2054

Alternate gene names: NA

Gene position: 2198566-2199711 (Clockwise)

Preceding gene: 119716284

Following gene: 119716286

Centisome position: 44.1

GC content: 77.49

Gene sequence:

>1146_bases
GTGAGCTCGTTCGCCGAGCCGGTCGTCGCCTGGCACCGGCCCGACGACCCGCAGCGGCCCCTGGTCGTGCTGCTGCACGG
CCGGGGCGCCGACGAGCAGGGCATCATCGGCCTGGCCGACCACCTGCCGGACGGCCCGTCCTACGCCGCGGTCCGCGCGC
CGATCGCCGAGGGCGGCGGCTACGCCTGGTTCGCCAACCGCGGCATCGGACGCCCGGTCGCGGAGTCCCTGGCGCAGACC
ATGGCCTGGTTCCGCCGCTGGCTCGACGAGGTCGCCCCCGCCGGCCGCCCGGTCGTGCTGGCGGGGTTCAGCGGCGGCGC
CGCCTTCGCCGGCGGGCTGCTGCTCAGCGAGCCGGAGCGGTACGCCGGCGCGGCGATCCTCTACGGCACCCTGCCGTTCG
ACGCGGGCGTCCCCGTGACTCCCGCGCGGCTGGCCGGCGTGCCGGTGTTCGTCGCCCAGGGGGACGCCGACACGGTGATC
CCGCGCGAGCTGCTGGACCGCACCTGGTCCTACCTGACCGGCGAGTCCGGCGCCCCGCCGTACGCCCGGCGCGACCCCGG
CGGCCACGGGCTCACCGCGGCCACCGTCGTCGAGCTCAGCGGCTGGATCGGCGAGCGCCTCGACCTGCTCGTCCGGCGCG
GGCCGCTGGCCGACGGCCCGGCGACCTGGGCGACCCTGCCGGACGGGCGGCTGCCCGTCCGCATGGGCTCGCGGCCGCGG
GTCTCGTGGAGCATCCCGCAGCAGCAGGAGTCCGAGAACAGCCCGGCCGAGCTCCAGGAGCAGCTGTTCGCCCGGGTCAG
CGCGCTGCCGGGCGTCTCGAGCCGGCAGTCGGCGATCTCGGTCCCCGGCGCTCGCGGCTTCATGGTGCCGCCCGCGCCGG
ACGCGCCAGTGGACGCCTACCTCGTGCCGCACGTCGGGGAGTTCGCGCACCTGCATCCCGAGTACGACGGGTCGCTGCAC
CTGGCGCTGCCGCCGGCCCTCGCCCGCGACGCGGTGGCCCAGGGCTGGGCGGTCGCGCACCCGCTGGCCGGCATCCGCCT
GGCCCGCGGCATGGTGATGGTCTACGGCCCCCGCGACGCCGCGGAGCTCGAGGTCGTCGCCGGCATCGTGGCTGCCAGCC
ACGCCTACGCGACGATGGCCGGGTGA

Upstream 100 bases:

>100_bases
AGAACTCCGCCCCGATCGAGCACCTCGACCTGGACGCCGAGCTGGCCCGCTGGGGCGGCGTCTCGTCGGCCGGCCGGATC
GTCACCGAGGCGGTGGCCTC

Downstream 100 bases:

>100_bases
ATCCCCGCCACGCCGCCGACCTGCTCCGCGCCGCGCGGGTCGAGCACCGCACGCTCTCGCCCTTCACCGACGAGCACCCC
GAGCTCGACGAGGACTGGGG

Product: phospholipase/carboxylesterase

Products: NA

Alternate protein names: Esterase; COBF Protein

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MSSFAEPVVAWHRPDDPQRPLVVLLHGRGADEQGIIGLADHLPDGPSYAAVRAPIAEGGGYAWFANRGIGRPVAESLAQT
MAWFRRWLDEVAPAGRPVVLAGFSGGAAFAGGLLLSEPERYAGAAILYGTLPFDAGVPVTPARLAGVPVFVAQGDADTVI
PRELLDRTWSYLTGESGAPPYARRDPGGHGLTAATVVELSGWIGERLDLLVRRGPLADGPATWATLPDGRLPVRMGSRPR
VSWSIPQQQESENSPAELQEQLFARVSALPGVSSRQSAISVPGARGFMVPPAPDAPVDAYLVPHVGEFAHLHPEYDGSLH
LALPPALARDAVAQGWAVAHPLAGIRLARGMVMVYGPRDAAELEVVAGIVAASHAYATMAG

Sequences:

>Translated_381_residues
MSSFAEPVVAWHRPDDPQRPLVVLLHGRGADEQGIIGLADHLPDGPSYAAVRAPIAEGGGYAWFANRGIGRPVAESLAQT
MAWFRRWLDEVAPAGRPVVLAGFSGGAAFAGGLLLSEPERYAGAAILYGTLPFDAGVPVTPARLAGVPVFVAQGDADTVI
PRELLDRTWSYLTGESGAPPYARRDPGGHGLTAATVVELSGWIGERLDLLVRRGPLADGPATWATLPDGRLPVRMGSRPR
VSWSIPQQQESENSPAELQEQLFARVSALPGVSSRQSAISVPGARGFMVPPAPDAPVDAYLVPHVGEFAHLHPEYDGSLH
LALPPALARDAVAQGWAVAHPLAGIRLARGMVMVYGPRDAAELEVVAGIVAASHAYATMAG
>Mature_380_residues
SSFAEPVVAWHRPDDPQRPLVVLLHGRGADEQGIIGLADHLPDGPSYAAVRAPIAEGGGYAWFANRGIGRPVAESLAQTM
AWFRRWLDEVAPAGRPVVLAGFSGGAAFAGGLLLSEPERYAGAAILYGTLPFDAGVPVTPARLAGVPVFVAQGDADTVIP
RELLDRTWSYLTGESGAPPYARRDPGGHGLTAATVVELSGWIGERLDLLVRRGPLADGPATWATLPDGRLPVRMGSRPRV
SWSIPQQQESENSPAELQEQLFARVSALPGVSSRQSAISVPGARGFMVPPAPDAPVDAYLVPHVGEFAHLHPEYDGSLHL
ALPPALARDAVAQGWAVAHPLAGIRLARGMVMVYGPRDAAELEVVAGIVAASHAYATMAG

Specific function: Unknown

COG id: COG0400

COG function: function code R; Predicted esterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40046; Mature: 39915

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSFAEPVVAWHRPDDPQRPLVVLLHGRGADEQGIIGLADHLPDGPSYAAVRAPIAEGGG
CCCCCCCCEEECCCCCCCCCEEEEEECCCCCCCCEEEHHHCCCCCCCCEEEECCHHCCCC
YAWFANRGIGRPVAESLAQTMAWFRRWLDEVAPAGRPVVLAGFSGGAAFAGGLLLSEPER
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHCCEEECCCHH
YAGAAILYGTLPFDAGVPVTPARLAGVPVFVAQGDADTVIPRELLDRTWSYLTGESGAPP
HCCEEEEEEECCCCCCCCCCHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCC
YARRDPGGHGLTAATVVELSGWIGERLDLLVRRGPLADGPATWATLPDGRLPVRMGSRPR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEECCCCC
VSWSIPQQQESENSPAELQEQLFARVSALPGVSSRQSAISVPGARGFMVPPAPDAPVDAY
EEECCCCHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEECCCCCCCCCCEE
LVPHVGEFAHLHPEYDGSLHLALPPALARDAVAQGWAVAHPLAGIRLARGMVMVYGPRDA
ECCCCCCHHCCCCCCCCEEEEECCCHHHHHHHHCCCHHHCCHHHHHHHCCEEEEECCCCC
AELEVVAGIVAASHAYATMAG
HHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SSFAEPVVAWHRPDDPQRPLVVLLHGRGADEQGIIGLADHLPDGPSYAAVRAPIAEGGG
CCCCCCCEEECCCCCCCCCEEEEEECCCCCCCCEEEHHHCCCCCCCCEEEECCHHCCCC
YAWFANRGIGRPVAESLAQTMAWFRRWLDEVAPAGRPVVLAGFSGGAAFAGGLLLSEPER
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHCCEEECCCHH
YAGAAILYGTLPFDAGVPVTPARLAGVPVFVAQGDADTVIPRELLDRTWSYLTGESGAPP
HCCEEEEEEECCCCCCCCCCHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCC
YARRDPGGHGLTAATVVELSGWIGERLDLLVRRGPLADGPATWATLPDGRLPVRMGSRPR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEECCCCC
VSWSIPQQQESENSPAELQEQLFARVSALPGVSSRQSAISVPGARGFMVPPAPDAPVDAY
EEECCCCHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEECCCCCCCCCCEE
LVPHVGEFAHLHPEYDGSLHLALPPALARDAVAQGWAVAHPLAGIRLARGMVMVYGPRDA
ECCCCCCHHCCCCCCCCEEEEECCCHHHHHHHHCCCHHHCCHHHHHHHCCEEEEECCCCC
AELEVVAGIVAASHAYATMAG
HHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA