| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716285
Identifier: 119716285
GI number: 119716285
Start: 2198566
End: 2199711
Strand: Direct
Name: 119716285
Synonym: Noca_2054
Alternate gene names: NA
Gene position: 2198566-2199711 (Clockwise)
Preceding gene: 119716284
Following gene: 119716286
Centisome position: 44.1
GC content: 77.49
Gene sequence:
>1146_bases GTGAGCTCGTTCGCCGAGCCGGTCGTCGCCTGGCACCGGCCCGACGACCCGCAGCGGCCCCTGGTCGTGCTGCTGCACGG CCGGGGCGCCGACGAGCAGGGCATCATCGGCCTGGCCGACCACCTGCCGGACGGCCCGTCCTACGCCGCGGTCCGCGCGC CGATCGCCGAGGGCGGCGGCTACGCCTGGTTCGCCAACCGCGGCATCGGACGCCCGGTCGCGGAGTCCCTGGCGCAGACC ATGGCCTGGTTCCGCCGCTGGCTCGACGAGGTCGCCCCCGCCGGCCGCCCGGTCGTGCTGGCGGGGTTCAGCGGCGGCGC CGCCTTCGCCGGCGGGCTGCTGCTCAGCGAGCCGGAGCGGTACGCCGGCGCGGCGATCCTCTACGGCACCCTGCCGTTCG ACGCGGGCGTCCCCGTGACTCCCGCGCGGCTGGCCGGCGTGCCGGTGTTCGTCGCCCAGGGGGACGCCGACACGGTGATC CCGCGCGAGCTGCTGGACCGCACCTGGTCCTACCTGACCGGCGAGTCCGGCGCCCCGCCGTACGCCCGGCGCGACCCCGG CGGCCACGGGCTCACCGCGGCCACCGTCGTCGAGCTCAGCGGCTGGATCGGCGAGCGCCTCGACCTGCTCGTCCGGCGCG GGCCGCTGGCCGACGGCCCGGCGACCTGGGCGACCCTGCCGGACGGGCGGCTGCCCGTCCGCATGGGCTCGCGGCCGCGG GTCTCGTGGAGCATCCCGCAGCAGCAGGAGTCCGAGAACAGCCCGGCCGAGCTCCAGGAGCAGCTGTTCGCCCGGGTCAG CGCGCTGCCGGGCGTCTCGAGCCGGCAGTCGGCGATCTCGGTCCCCGGCGCTCGCGGCTTCATGGTGCCGCCCGCGCCGG ACGCGCCAGTGGACGCCTACCTCGTGCCGCACGTCGGGGAGTTCGCGCACCTGCATCCCGAGTACGACGGGTCGCTGCAC CTGGCGCTGCCGCCGGCCCTCGCCCGCGACGCGGTGGCCCAGGGCTGGGCGGTCGCGCACCCGCTGGCCGGCATCCGCCT GGCCCGCGGCATGGTGATGGTCTACGGCCCCCGCGACGCCGCGGAGCTCGAGGTCGTCGCCGGCATCGTGGCTGCCAGCC ACGCCTACGCGACGATGGCCGGGTGA
Upstream 100 bases:
>100_bases AGAACTCCGCCCCGATCGAGCACCTCGACCTGGACGCCGAGCTGGCCCGCTGGGGCGGCGTCTCGTCGGCCGGCCGGATC GTCACCGAGGCGGTGGCCTC
Downstream 100 bases:
>100_bases ATCCCCGCCACGCCGCCGACCTGCTCCGCGCCGCGCGGGTCGAGCACCGCACGCTCTCGCCCTTCACCGACGAGCACCCC GAGCTCGACGAGGACTGGGG
Product: phospholipase/carboxylesterase
Products: NA
Alternate protein names: Esterase; COBF Protein
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MSSFAEPVVAWHRPDDPQRPLVVLLHGRGADEQGIIGLADHLPDGPSYAAVRAPIAEGGGYAWFANRGIGRPVAESLAQT MAWFRRWLDEVAPAGRPVVLAGFSGGAAFAGGLLLSEPERYAGAAILYGTLPFDAGVPVTPARLAGVPVFVAQGDADTVI PRELLDRTWSYLTGESGAPPYARRDPGGHGLTAATVVELSGWIGERLDLLVRRGPLADGPATWATLPDGRLPVRMGSRPR VSWSIPQQQESENSPAELQEQLFARVSALPGVSSRQSAISVPGARGFMVPPAPDAPVDAYLVPHVGEFAHLHPEYDGSLH LALPPALARDAVAQGWAVAHPLAGIRLARGMVMVYGPRDAAELEVVAGIVAASHAYATMAG
Sequences:
>Translated_381_residues MSSFAEPVVAWHRPDDPQRPLVVLLHGRGADEQGIIGLADHLPDGPSYAAVRAPIAEGGGYAWFANRGIGRPVAESLAQT MAWFRRWLDEVAPAGRPVVLAGFSGGAAFAGGLLLSEPERYAGAAILYGTLPFDAGVPVTPARLAGVPVFVAQGDADTVI PRELLDRTWSYLTGESGAPPYARRDPGGHGLTAATVVELSGWIGERLDLLVRRGPLADGPATWATLPDGRLPVRMGSRPR VSWSIPQQQESENSPAELQEQLFARVSALPGVSSRQSAISVPGARGFMVPPAPDAPVDAYLVPHVGEFAHLHPEYDGSLH LALPPALARDAVAQGWAVAHPLAGIRLARGMVMVYGPRDAAELEVVAGIVAASHAYATMAG >Mature_380_residues SSFAEPVVAWHRPDDPQRPLVVLLHGRGADEQGIIGLADHLPDGPSYAAVRAPIAEGGGYAWFANRGIGRPVAESLAQTM AWFRRWLDEVAPAGRPVVLAGFSGGAAFAGGLLLSEPERYAGAAILYGTLPFDAGVPVTPARLAGVPVFVAQGDADTVIP RELLDRTWSYLTGESGAPPYARRDPGGHGLTAATVVELSGWIGERLDLLVRRGPLADGPATWATLPDGRLPVRMGSRPRV SWSIPQQQESENSPAELQEQLFARVSALPGVSSRQSAISVPGARGFMVPPAPDAPVDAYLVPHVGEFAHLHPEYDGSLHL ALPPALARDAVAQGWAVAHPLAGIRLARGMVMVYGPRDAAELEVVAGIVAASHAYATMAG
Specific function: Unknown
COG id: COG0400
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40046; Mature: 39915
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSFAEPVVAWHRPDDPQRPLVVLLHGRGADEQGIIGLADHLPDGPSYAAVRAPIAEGGG CCCCCCCCEEECCCCCCCCCEEEEEECCCCCCCCEEEHHHCCCCCCCCEEEECCHHCCCC YAWFANRGIGRPVAESLAQTMAWFRRWLDEVAPAGRPVVLAGFSGGAAFAGGLLLSEPER EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHCCEEECCCHH YAGAAILYGTLPFDAGVPVTPARLAGVPVFVAQGDADTVIPRELLDRTWSYLTGESGAPP HCCEEEEEEECCCCCCCCCCHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCC YARRDPGGHGLTAATVVELSGWIGERLDLLVRRGPLADGPATWATLPDGRLPVRMGSRPR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEECCCCC VSWSIPQQQESENSPAELQEQLFARVSALPGVSSRQSAISVPGARGFMVPPAPDAPVDAY EEECCCCHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEECCCCCCCCCCEE LVPHVGEFAHLHPEYDGSLHLALPPALARDAVAQGWAVAHPLAGIRLARGMVMVYGPRDA ECCCCCCHHCCCCCCCCEEEEECCCHHHHHHHHCCCHHHCCHHHHHHHCCEEEEECCCCC AELEVVAGIVAASHAYATMAG HHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SSFAEPVVAWHRPDDPQRPLVVLLHGRGADEQGIIGLADHLPDGPSYAAVRAPIAEGGG CCCCCCCEEECCCCCCCCCEEEEEECCCCCCCCEEEHHHCCCCCCCCEEEECCHHCCCC YAWFANRGIGRPVAESLAQTMAWFRRWLDEVAPAGRPVVLAGFSGGAAFAGGLLLSEPER EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHCCEEECCCHH YAGAAILYGTLPFDAGVPVTPARLAGVPVFVAQGDADTVIPRELLDRTWSYLTGESGAPP HCCEEEEEEECCCCCCCCCCHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCC YARRDPGGHGLTAATVVELSGWIGERLDLLVRRGPLADGPATWATLPDGRLPVRMGSRPR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEECCCCC VSWSIPQQQESENSPAELQEQLFARVSALPGVSSRQSAISVPGARGFMVPPAPDAPVDAY EEECCCCHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEECCCCCCCCCCEE LVPHVGEFAHLHPEYDGSLHLALPPALARDAVAQGWAVAHPLAGIRLARGMVMVYGPRDA ECCCCCCHHCCCCCCCCEEEEECCCHHHHHHHHCCCHHHCCHHHHHHHCCEEEEECCCCC AELEVVAGIVAASHAYATMAG HHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA