| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716180
Identifier: 119716180
GI number: 119716180
Start: 2080520
End: 2081041
Strand: Direct
Name: 119716180
Synonym: Noca_1948
Alternate gene names: NA
Gene position: 2080520-2081041 (Clockwise)
Preceding gene: 119716179
Following gene: 119716181
Centisome position: 41.73
GC content: 75.86
Gene sequence:
>522_bases GTGAGCCCCTGGCGTCGCCAGCGCCCGCCGATCCGGGTCGAGCGCGGCGAGCGGCTCCTCGCCGACGCCGTCGCGGCCGA GGGCCACCTCGGCGGCACCCGCGACGCCCTCTACCTGGTGCGCTCCCGCGGCGGCACCGCCTTCGAGCTGAGCGAGACCG TCCGGATCCCGTGGGAGGACGTCGAGGCCGCCGACTGGGACCAGGAGACCGAGGTGCTGCGGGTCACCGAGGTCGGCAGC TGGGGACAGGTGCGTCCGGAGCACCGCTTCACCCTCGACGAGCCGGGCCGGCTCCTCGAGCTGGTCCGCGAGCGCGTCAC CGCCAGCATCGTGCTGCAGCGGCACGTGCCGGTCGACGAGCGCCGCGGCCTGCGGGTGATCGCTCGTCGAGCGCCGTCCG GGAACCGGCCGGTGCAGTGGGTCTACGAGTACGACGAGGGCGTCGACCCGGACGATCCCGAGGTGCGCAGGCTGGCCCGG GAGGCGCTCGCGGCCGCCCAGCAGGACGTCGGCCCGGTCTGA
Upstream 100 bases:
>100_bases CGGTCGAGCATGCGGAGGAGTTCAACAAGATGTTCGGAGAGCTCGCCGCGCTGGAGGCGCACCGCCGGGCGCTGCGCGAC CGGCTCGCGGGGAGTGCCAC
Downstream 100 bases:
>100_bases CCACCTCGATTTCTGTTGGTCCGCCCGGATTGCTAACCTGTGCGGGCTGCACCGATCCCCTGTAGCTCAACTGGCAGAGC ATTCGGCTGTTAACCGGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MSPWRRQRPPIRVERGERLLADAVAAEGHLGGTRDALYLVRSRGGTAFELSETVRIPWEDVEAADWDQETEVLRVTEVGS WGQVRPEHRFTLDEPGRLLELVRERVTASIVLQRHVPVDERRGLRVIARRAPSGNRPVQWVYEYDEGVDPDDPEVRRLAR EALAAAQQDVGPV
Sequences:
>Translated_173_residues MSPWRRQRPPIRVERGERLLADAVAAEGHLGGTRDALYLVRSRGGTAFELSETVRIPWEDVEAADWDQETEVLRVTEVGS WGQVRPEHRFTLDEPGRLLELVRERVTASIVLQRHVPVDERRGLRVIARRAPSGNRPVQWVYEYDEGVDPDDPEVRRLAR EALAAAQQDVGPV >Mature_172_residues SPWRRQRPPIRVERGERLLADAVAAEGHLGGTRDALYLVRSRGGTAFELSETVRIPWEDVEAADWDQETEVLRVTEVGSW GQVRPEHRFTLDEPGRLLELVRERVTASIVLQRHVPVDERRGLRVIARRAPSGNRPVQWVYEYDEGVDPDDPEVRRLARE ALAAAQQDVGPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19688; Mature: 19557
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPWRRQRPPIRVERGERLLADAVAAEGHLGGTRDALYLVRSRGGTAFELSETVRIPWED CCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCHHHEEEEECCCCCEEEECCEEECCCCC VEAADWDQETEVLRVTEVGSWGQVRPEHRFTLDEPGRLLELVRERVTASIVLQRHVPVDE CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC RRGLRVIARRAPSGNRPVQWVYEYDEGVDPDDPEVRRLAREALAAAQQDVGPV CCCCEEEEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SPWRRQRPPIRVERGERLLADAVAAEGHLGGTRDALYLVRSRGGTAFELSETVRIPWED CCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCHHHEEEEECCCCCEEEECCEEECCCCC VEAADWDQETEVLRVTEVGSWGQVRPEHRFTLDEPGRLLELVRERVTASIVLQRHVPVDE CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC RRGLRVIARRAPSGNRPVQWVYEYDEGVDPDDPEVRRLAREALAAAQQDVGPV CCCCEEEEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA