| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716176
Identifier: 119716176
GI number: 119716176
Start: 2074566
End: 2075252
Strand: Reverse
Name: 119716176
Synonym: Noca_1944
Alternate gene names: NA
Gene position: 2075252-2074566 (Counterclockwise)
Preceding gene: 119716182
Following gene: 119716169
Centisome position: 41.62
GC content: 74.38
Gene sequence:
>687_bases ATGACGCGGATCGACGAGTACCGTTCCGACCTCGGTCGGCTGGACCGCGCCGCGTGGCCGGGCTACCTCGACCGGCACTC CCACCTCCCGGGCCCGCGTGGGAACATCGAGCTCGCGATGGCGTTCGCCGAGCTCGCCGACCTGGCGCTGGACGACGAGC TGATCGCGAGCGGCGACGAGTACCGCACCTTCTGCGGGGTCCTCGGCCTGGGCGCCACCGCGGCGGATCCGGAGGTGCAG GCGCGCCTGCGCGAGCTCGCCACCGACGAGCGCTGGCGGATCCGCGAGGCGGTCGCGATGGCGCTCCAGCACTTCGGCGA CCTCAACCTTCCGGCCCTGGAGATGGTCGTCCTCGACTGGGCGAACGACCCGCGTCCGCTGGTGCAGCGCGCCGCGGCTG CCGGCATCTGCGAGCCACGGCTGCTCGTCGGGCCCGCCGCCGCCGCGGTCGCGATCGAGGTCTGCCGGCGTACGACGCGC GCGCTGGCCGACCTGCCGGCCGAGCGCCGCGGCGACAGCGAGGTGCGGACCCTGCGGCAGGGACTGGGCTACTGCTGGAG TGTCGCGGTCGCCGCCGACCCGGCCCAAGGCCTGCCGGCGTTCTGGGCGCTCGACGACGCCGACGCCGACATCGCGTGGA TCGTGCGGGAGAACCTGCAGAAGGCGCGGCTCACCCGACTGCTGTGA
Upstream 100 bases:
>100_bases CAGGTGTTCCATCGCTGCAGACCCTAGTGCGACCGACTGACCTTCGACTTGGGACCTCGGGCCCTACCGTGACCCGCGCC ACATTGAAGATCGTTGAGGC
Downstream 100 bases:
>100_bases GCCCCGCGGGCCGCCGGAATTCCCCGAGGGTCAGCCGTTCGTGGCGACGTGCACGTGGTCGTAGTGGTCCGCGGTCGCCG ACCCACGGGAGGACATCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MTRIDEYRSDLGRLDRAAWPGYLDRHSHLPGPRGNIELAMAFAELADLALDDELIASGDEYRTFCGVLGLGATAADPEVQ ARLRELATDERWRIREAVAMALQHFGDLNLPALEMVVLDWANDPRPLVQRAAAAGICEPRLLVGPAAAAVAIEVCRRTTR ALADLPAERRGDSEVRTLRQGLGYCWSVAVAADPAQGLPAFWALDDADADIAWIVRENLQKARLTRLL
Sequences:
>Translated_228_residues MTRIDEYRSDLGRLDRAAWPGYLDRHSHLPGPRGNIELAMAFAELADLALDDELIASGDEYRTFCGVLGLGATAADPEVQ ARLRELATDERWRIREAVAMALQHFGDLNLPALEMVVLDWANDPRPLVQRAAAAGICEPRLLVGPAAAAVAIEVCRRTTR ALADLPAERRGDSEVRTLRQGLGYCWSVAVAADPAQGLPAFWALDDADADIAWIVRENLQKARLTRLL >Mature_227_residues TRIDEYRSDLGRLDRAAWPGYLDRHSHLPGPRGNIELAMAFAELADLALDDELIASGDEYRTFCGVLGLGATAADPEVQA RLRELATDERWRIREAVAMALQHFGDLNLPALEMVVLDWANDPRPLVQRAAAAGICEPRLLVGPAAAAVAIEVCRRTTRA LADLPAERRGDSEVRTLRQGLGYCWSVAVAADPAQGLPAFWALDDADADIAWIVRENLQKARLTRLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25033; Mature: 24902
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRIDEYRSDLGRLDRAAWPGYLDRHSHLPGPRGNIELAMAFAELADLALDDELIASGDE CCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHCCCH YRTFCGVLGLGATAADPEVQARLRELATDERWRIREAVAMALQHFGDLNLPALEMVVLDW HHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHEECC ANDPRPLVQRAAAAGICEPRLLVGPAAAAVAIEVCRRTTRALADLPAERRGDSEVRTLRQ CCCCHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHH GLGYCWSVAVAADPAQGLPAFWALDDADADIAWIVRENLQKARLTRLL HHHHHHHHHEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TRIDEYRSDLGRLDRAAWPGYLDRHSHLPGPRGNIELAMAFAELADLALDDELIASGDE CCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHCCCH YRTFCGVLGLGATAADPEVQARLRELATDERWRIREAVAMALQHFGDLNLPALEMVVLDW HHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHEECC ANDPRPLVQRAAAAGICEPRLLVGPAAAAVAIEVCRRTTRALADLPAERRGDSEVRTLRQ CCCCHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHH GLGYCWSVAVAADPAQGLPAFWALDDADADIAWIVRENLQKARLTRLL HHHHHHHHHEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA