| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716175
Identifier: 119716175
GI number: 119716175
Start: 2073666
End: 2074535
Strand: Direct
Name: 119716175
Synonym: Noca_1943
Alternate gene names: NA
Gene position: 2073666-2074535 (Clockwise)
Preceding gene: 119716174
Following gene: 119716177
Centisome position: 41.59
GC content: 72.76
Gene sequence:
>870_bases GTGGCAGAGCATCGCCACAAGCGGGCCGATGCCCGACGCAAGCCCCGAGCCGCCTTCATCGCCGCACCCCTCGCCGTCCT GGCAACCGCATCCGCGGTGTCGCTCGGTGTGGTCGCGACCAACCCGGAGGCGCGCGACCTGGTCGCTCAGGAGACCGCCG GTACGACCGCCGACCTCGGGGCCGCCGCGGACCGGCCGGCGCCCCTGTCCCGGGCCGGCTCGCGCGTCGGCGCAGCGGAC AAGCGGGCCGAGAAGCTCGAGCAGCGGCGGGCGGCGACCGAGCGCGCCGTGCGGCGGGCCGACACGAAGCTGTGGACCAC CACGGTGCTCAACCTGTGGTCCAACCCCGGCGAGGACGCCGTGCAGGTCGGCGAGCTCGAGGCCGGCAAGCGGATCCTGG TGACCGGTCGCTCCACCGATGAGCGGGTCGAGGTCGTGTGGCAGGGCAAGTCGCGGTGGGTGACCGCGGGCTACCTGTCC GAGGACAAGCCGCTCACCGCGGCCGCCGGGCTGTCCATGGCGCCCTGCCCGGACCCGAGCGTGGAGCACGGCCTGACCTC CGACGCGGTCTACGTCTACCGCTCCGTGTGCCACGCCTTCCCGCAGATCACCTCGTACGGCGGCTGGGACGACCACGGTG AGCACGCGTCCGGCCGGGCGCTGGACATCATGACCAGCGACGTCGCGCTCGGCAACGCGATCGCGGAGTTCCTGCAGCAG CATGCTGCCGAGCTCAACCTCTACGACATCCTCTGGCGCCAGCAGATCTGGACCCCGGAGCGCGCCAGCGAGGGTTGGCG CTCGATGTCCTCCCGTGGGTCGGCGACCGCGGACCACTACGACCACGTGCACGTCGCCACGAACGGCTGA
Upstream 100 bases:
>100_bases GGCGTGTGGTTGACTCGGGCGGTCGTTGCCGATTCGTGACCTTTCTCGGGTGTCCACGGCAGGGGCAGACCCCCGACAGC AACAGCAAAGGATCAGCGCT
Downstream 100 bases:
>100_bases CCCTCGGGGAATTCCGGCGGCCCGCGGGGCTCACAGCAGTCGGGTGAGCCGCGCCTTCTGCAGGTTCTCCCGCACGATCC ACGCGATGTCGGCGTCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MAEHRHKRADARRKPRAAFIAAPLAVLATASAVSLGVVATNPEARDLVAQETAGTTADLGAAADRPAPLSRAGSRVGAAD KRAEKLEQRRAATERAVRRADTKLWTTTVLNLWSNPGEDAVQVGELEAGKRILVTGRSTDERVEVVWQGKSRWVTAGYLS EDKPLTAAAGLSMAPCPDPSVEHGLTSDAVYVYRSVCHAFPQITSYGGWDDHGEHASGRALDIMTSDVALGNAIAEFLQQ HAAELNLYDILWRQQIWTPERASEGWRSMSSRGSATADHYDHVHVATNG
Sequences:
>Translated_289_residues MAEHRHKRADARRKPRAAFIAAPLAVLATASAVSLGVVATNPEARDLVAQETAGTTADLGAAADRPAPLSRAGSRVGAAD KRAEKLEQRRAATERAVRRADTKLWTTTVLNLWSNPGEDAVQVGELEAGKRILVTGRSTDERVEVVWQGKSRWVTAGYLS EDKPLTAAAGLSMAPCPDPSVEHGLTSDAVYVYRSVCHAFPQITSYGGWDDHGEHASGRALDIMTSDVALGNAIAEFLQQ HAAELNLYDILWRQQIWTPERASEGWRSMSSRGSATADHYDHVHVATNG >Mature_288_residues AEHRHKRADARRKPRAAFIAAPLAVLATASAVSLGVVATNPEARDLVAQETAGTTADLGAAADRPAPLSRAGSRVGAADK RAEKLEQRRAATERAVRRADTKLWTTTVLNLWSNPGEDAVQVGELEAGKRILVTGRSTDERVEVVWQGKSRWVTAGYLSE DKPLTAAAGLSMAPCPDPSVEHGLTSDAVYVYRSVCHAFPQITSYGGWDDHGEHASGRALDIMTSDVALGNAIAEFLQQH AAELNLYDILWRQQIWTPERASEGWRSMSSRGSATADHYDHVHVATNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31196; Mature: 31065
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEHRHKRADARRKPRAAFIAAPLAVLATASAVSLGVVATNPEARDLVAQETAGTTADLG CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHCCCCCHHCC AAADRPAPLSRAGSRVGAADKRAEKLEQRRAATERAVRRADTKLWTTTVLNLWSNPGEDA CCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH VQVGELEAGKRILVTGRSTDERVEVVWQGKSRWVTAGYLSEDKPLTAAAGLSMAPCPDPS HHHCCCCCCCEEEEECCCCCCEEEEEEECCCCEEEEECCCCCCCCHHHCCCCCCCCCCCC VEHGLTSDAVYVYRSVCHAFPQITSYGGWDDHGEHASGRALDIMTSDVALGNAIAEFLQQ HHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHH HAAELNLYDILWRQQIWTPERASEGWRSMSSRGSATADHYDHVHVATNG HHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECC >Mature Secondary Structure AEHRHKRADARRKPRAAFIAAPLAVLATASAVSLGVVATNPEARDLVAQETAGTTADLG CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHCCCCCHHCC AAADRPAPLSRAGSRVGAADKRAEKLEQRRAATERAVRRADTKLWTTTVLNLWSNPGEDA CCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH VQVGELEAGKRILVTGRSTDERVEVVWQGKSRWVTAGYLSEDKPLTAAAGLSMAPCPDPS HHHCCCCCCCEEEEECCCCCCEEEEEEECCCCEEEEECCCCCCCCHHHCCCCCCCCCCCC VEHGLTSDAVYVYRSVCHAFPQITSYGGWDDHGEHASGRALDIMTSDVALGNAIAEFLQQ HHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHH HAAELNLYDILWRQQIWTPERASEGWRSMSSRGSATADHYDHVHVATNG HHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA