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The map label for this gene is ybeX [C]

Identifier: 119716146

GI number: 119716146

Start: 2041435

End: 2042727

Strand: Direct

Name: ybeX [C]

Synonym: Noca_1914

Alternate gene names: 119716146

Gene position: 2041435-2042727 (Clockwise)

Preceding gene: 119716145

Following gene: 119716147

Centisome position: 40.94

GC content: 70.61

Gene sequence:

>1293_bases
GTGAGCGTCTGGCTGCTGCTGGCCGCGGCCGTCCTGGTCGGGCTGGCCGGGCTGTTCTCGGCGACGGACGCCGCGGTGTC
GTCGTTCTCCCGGGCCCGCGCCGAGGAGCTGCTCGCGGAGGGCCGCCCGGGATCGAAGCGGCTGGTCGCGCTGCTCGACG
ACCTGCCGCGCTACCTCAACACCGCGCTCCTGCTGCGCCTGCTGTGCGAGGTCTCCGCGATCGTGCTGGTCACCCTCGAG
GCCAGCAGTGCGTACGACGGCCGCGCGTGGCCGACCGCGCTGACGGTGATCGGCGTGATGCTGGTGGTCTCGTTCGTCGC
GATCGGCGTCGCACCGCGCACCCTCGGCCGCCAGCACTCCGAGCGGTTCGCGCTGCTCTCGGCCGCGCCGCTGGCCACGG
TGACGGCCGTGCTGGGGCCGCTGCCCCGGTTGCTGATCCTGGTCGGCAACGCGCTCACCCCCGGCAAGGGCTTCCGCGAG
GGGCCGTTCTCGACCGAGACCGAGCTGCGCGAGCTGGTCGACCTCGCCGAGGCCTCCGCGGTCATCGAGTCCGGCGAGCG
CAAGATGATCCACTCGGTCTTCGAGCTCGGCGACACCATCGCCCGCGAGGTGATGGTGCCGCGCACCGATGTCGTCTACA
TCGAGCGGCACAAGAACCTGCGCCAGACGCTGTCGCTGTTCCTGCGCAGCGGCTTCTCCCGGGTGCCGGTGATCGGCGAG
AACCTCGACGACGTCGTCGGCATCGCCTACCTCAAGGACATCGTGCGCCGCGACTTCGAGGCGCCCGACGTCGAGTTCAC
CGAGCGCATCGACGAGGTGATGCGCCCCGCGCACTTCGTGCCGGAGTCCAAGCCGGTCGACGGGCTGCTCTCGGAGATGC
AGGCCATGCGCCAGCACATCGCGGTCGTCGTCGACGAGTACGGCGGCACCGCCGGACTGGTGACGATCGAGGACGTGCTC
GAGGAGATCGTCGGCGAGATCACCGACGAGTACGACGAGGCCACCGTCGAGGTGGAGAGCCTCGACGACGACGCCGTGCG
GGTCTCCTCGCGCTACCCGATCGACGACCTCGACGAGCTGTTCGGCTTCGCGGTCGAGGAGGAGGACATCGACAGCGTCG
GCGGTCTGATGGCCAAGCACCTGGGCCGGGTCCCGATCCCGGGCTCGGTGGTCGAGGCGCACGGCCTGCGGTTCGAGGCC
GAGGGTGCCTCGGGTCGGCGCAACAAGATCGGCACCGTGCTGATCAGCCGGGTGGGGCCGGTCGACGACGAGAACGAGGA
GAGCGATGACTGA

Upstream 100 bases:

>100_bases
GAGCCGGAGGAGCACCGGGAGATGTTCGGCCTCCAGGACGAGCTCCTGGCCGCCTGGCGCGCCCGGTGACGGGGCCGGTG
AACGGTCCAGTGAGACCTCG

Downstream 100 bases:

>100_bases
CGGCGCCGGGCTGACCGCCGAGGACGCGAAGCTGGTGACGCTCGCGCGGGCCACCCGCGCTCGGACCGGCGCGGCGGAGG
GCGCCGCCGTCCGCGACGCC

Product: CBS domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 429

Protein sequence:

>430_residues
MSVWLLLAAAVLVGLAGLFSATDAAVSSFSRARAEELLAEGRPGSKRLVALLDDLPRYLNTALLLRLLCEVSAIVLVTLE
ASSAYDGRAWPTALTVIGVMLVVSFVAIGVAPRTLGRQHSERFALLSAAPLATVTAVLGPLPRLLILVGNALTPGKGFRE
GPFSTETELRELVDLAEASAVIESGERKMIHSVFELGDTIAREVMVPRTDVVYIERHKNLRQTLSLFLRSGFSRVPVIGE
NLDDVVGIAYLKDIVRRDFEAPDVEFTERIDEVMRPAHFVPESKPVDGLLSEMQAMRQHIAVVVDEYGGTAGLVTIEDVL
EEIVGEITDEYDEATVEVESLDDDAVRVSSRYPIDDLDELFGFAVEEEDIDSVGGLMAKHLGRVPIPGSVVEAHGLRFEA
EGASGRRNKIGTVLISRVGPVDDENEESDD

Sequences:

>Translated_430_residues
MSVWLLLAAAVLVGLAGLFSATDAAVSSFSRARAEELLAEGRPGSKRLVALLDDLPRYLNTALLLRLLCEVSAIVLVTLE
ASSAYDGRAWPTALTVIGVMLVVSFVAIGVAPRTLGRQHSERFALLSAAPLATVTAVLGPLPRLLILVGNALTPGKGFRE
GPFSTETELRELVDLAEASAVIESGERKMIHSVFELGDTIAREVMVPRTDVVYIERHKNLRQTLSLFLRSGFSRVPVIGE
NLDDVVGIAYLKDIVRRDFEAPDVEFTERIDEVMRPAHFVPESKPVDGLLSEMQAMRQHIAVVVDEYGGTAGLVTIEDVL
EEIVGEITDEYDEATVEVESLDDDAVRVSSRYPIDDLDELFGFAVEEEDIDSVGGLMAKHLGRVPIPGSVVEAHGLRFEA
EGASGRRNKIGTVLISRVGPVDDENEESDD
>Mature_429_residues
SVWLLLAAAVLVGLAGLFSATDAAVSSFSRARAEELLAEGRPGSKRLVALLDDLPRYLNTALLLRLLCEVSAIVLVTLEA
SSAYDGRAWPTALTVIGVMLVVSFVAIGVAPRTLGRQHSERFALLSAAPLATVTAVLGPLPRLLILVGNALTPGKGFREG
PFSTETELRELVDLAEASAVIESGERKMIHSVFELGDTIAREVMVPRTDVVYIERHKNLRQTLSLFLRSGFSRVPVIGEN
LDDVVGIAYLKDIVRRDFEAPDVEFTERIDEVMRPAHFVPESKPVDGLLSEMQAMRQHIAVVVDEYGGTAGLVTIEDVLE
EIVGEITDEYDEATVEVESLDDDAVRVSSRYPIDDLDELFGFAVEEEDIDSVGGLMAKHLGRVPIPGSVVEAHGLRFEAE
GASGRRNKIGTVLISRVGPVDDENEESDD

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=398, Percent_Identity=27.8894472361809, Blast_Score=149, Evalue=6e-36,
Organism=Homo sapiens, GI94681046, Length=180, Percent_Identity=30.5555555555556, Blast_Score=70, Evalue=4e-12,
Organism=Escherichia coli, GI1786879, Length=252, Percent_Identity=35.3174603174603, Blast_Score=142, Evalue=3e-35,
Organism=Escherichia coli, GI145693175, Length=382, Percent_Identity=27.2251308900524, Blast_Score=127, Evalue=2e-30,
Organism=Escherichia coli, GI87082033, Length=218, Percent_Identity=25.6880733944954, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1790664, Length=436, Percent_Identity=19.954128440367, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1788119, Length=243, Percent_Identity=27.9835390946502, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 46640; Mature: 46509

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVWLLLAAAVLVGLAGLFSATDAAVSSFSRARAEELLAEGRPGSKRLVALLDDLPRYLN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
TALLLRLLCEVSAIVLVTLEASSAYDGRAWPTALTVIGVMLVVSFVAIGVAPRTLGRQHS
HHHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
ERFALLSAAPLATVTAVLGPLPRLLILVGNALTPGKGFREGPFSTETELRELVDLAEASA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
VIESGERKMIHSVFELGDTIAREVMVPRTDVVYIERHKNLRQTLSLFLRSGFSRVPVIGE
HHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCC
NLDDVVGIAYLKDIVRRDFEAPDVEFTERIDEVMRPAHFVPESKPVDGLLSEMQAMRQHI
CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
AVVVDEYGGTAGLVTIEDVLEEIVGEITDEYDEATVEVESLDDDAVRVSSRYPIDDLDEL
HHHHHCCCCCCCEEEHHHHHHHHHHHHHHCHHHHEEEEECCCCCHHEECCCCCCCHHHHH
FGFAVEEEDIDSVGGLMAKHLGRVPIPGSVVEAHGLRFEAEGASGRRNKIGTVLISRVGP
HCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCEEEECCCCCCCHHHHHHHHHHCCC
VDDENEESDD
CCCCCCCCCC
>Mature Secondary Structure 
SVWLLLAAAVLVGLAGLFSATDAAVSSFSRARAEELLAEGRPGSKRLVALLDDLPRYLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
TALLLRLLCEVSAIVLVTLEASSAYDGRAWPTALTVIGVMLVVSFVAIGVAPRTLGRQHS
HHHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
ERFALLSAAPLATVTAVLGPLPRLLILVGNALTPGKGFREGPFSTETELRELVDLAEASA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
VIESGERKMIHSVFELGDTIAREVMVPRTDVVYIERHKNLRQTLSLFLRSGFSRVPVIGE
HHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCC
NLDDVVGIAYLKDIVRRDFEAPDVEFTERIDEVMRPAHFVPESKPVDGLLSEMQAMRQHI
CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
AVVVDEYGGTAGLVTIEDVLEEIVGEITDEYDEATVEVESLDDDAVRVSSRYPIDDLDEL
HHHHHCCCCCCCEEEHHHHHHHHHHHHHHCHHHHEEEEECCCCCHHEECCCCCCCHHHHH
FGFAVEEEDIDSVGGLMAKHLGRVPIPGSVVEAHGLRFEAEGASGRRNKIGTVLISRVGP
HCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCEEEECCCCCCCHHHHHHHHHHCCC
VDDENEESDD
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]