| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716134
Identifier: 119716134
GI number: 119716134
Start: 2031430
End: 2032293
Strand: Reverse
Name: 119716134
Synonym: Noca_1902
Alternate gene names: NA
Gene position: 2032293-2031430 (Counterclockwise)
Preceding gene: 119716138
Following gene: 119716133
Centisome position: 40.76
GC content: 73.61
Gene sequence:
>864_bases GTGGCTTTCAGGGAGGTCGCCGACCGGGTCTGGGTCGCGCGCTACGAGTGGTTCGACGTCAACGTGACCCTGGTGGGCGG TGACTCGGGCCTCCTGGTCGTGGACACCCACGCCTCCGCCACGGCCGCGCGGGCCGTGGTCGACGACATCCGCCGGCTCG GCGCCGGGACGGTGATCGCGGTCGTCAACACCCACGAGCACTTCGACCACACCTTCGGCAACGGCGAGCTGCGCTCGGCG TACGGCGCCGACCTGCCGATCCATGCGCACGAGGCCGCGGCCGAGCGCACGGTCCCGGCCGGCGAGCGGATCCAGGCGGC GTACGACGAGGAGCCCGACGACCCGCACCGCGAGGAGGTGCTGGCCACCACGATCGTCCCGGCCGACCGGACGTTCTCCT CGGCGCGGGTGCTCGACCTGGGCGACCGGATGGTCGAGCTGGTGCATCCCGGACGCGGACACACCGCGGGTGACCTCGTG GTCCGGGTCCCGGACGCCGACGTGCTACTGGCCGGTGACCTCGTCGAGGAGTCGGCACTGCGCGCCGGGGTGCCGGGATT CGGCGAGGACTGCTATCCCTTCGACTGGCCGCTCAGCCTCGACGTCGTCCTGACGCTGACCACGCCGGACTCGGTGGTCG TCCCCGGCCACGGCGCCCCCGTGGACCGGGACTTCGTCGAGGAGCAGCGCAACGCGATCGGCGTGGTCGCGGAGACGATC CGCGACCTGGCCGGCCGCGGGGTCCCGGTCGGCCAGGCGCTCGAGATGGGCGAGTGGCCCTACCCGCGCACCGAGCTCGC CGCCGCCGTGCGCCGCGGCTACGACCAGCTCCCCCGCAGCCAGAAGCGGTTGCCGCTCGTGTAG
Upstream 100 bases:
>100_bases GGCACTCGAAAGTCCTGAGTGCCAAGACTACTAGGCGCCCCGCCGAGGCACGTCGTGGCGCGCTGCATCCCGTCGCGCAG GCAGGTCCTAGGGTGGCCCG
Downstream 100 bases:
>100_bases GAGGGGTACGTCGTGGTCATGAGCACCCACGACGACGAGCCCGCGGCCGGCATCTCCGACGACAAGCTGCCCGAGGACCT GCGGCCGACCGAGGACAACC
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: Metallo-Beta-Lactamase; Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase-Like; Cyclase; Beta-Lactamase Class B; Beta Lactamase; Dehydrase; Polyketide Cyclase; Zn-Dependent Hydrolase Glyoxylase; SoxH Protein -Like Protein; Glyoxylase-Like Zinc-Dependent Hydrolase; Beta-Lactamase-Like Protein; Beta-Lactamase; Zn-Dependent Hydrolase Family Protein; Metallo-Beta-Lactamase Domain Protein; Hydrolase; Zn-Dependent Hydrolase Including Glyoxylase
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MAFREVADRVWVARYEWFDVNVTLVGGDSGLLVVDTHASATAARAVVDDIRRLGAGTVIAVVNTHEHFDHTFGNGELRSA YGADLPIHAHEAAAERTVPAGERIQAAYDEEPDDPHREEVLATTIVPADRTFSSARVLDLGDRMVELVHPGRGHTAGDLV VRVPDADVLLAGDLVEESALRAGVPGFGEDCYPFDWPLSLDVVLTLTTPDSVVVPGHGAPVDRDFVEEQRNAIGVVAETI RDLAGRGVPVGQALEMGEWPYPRTELAAAVRRGYDQLPRSQKRLPLV
Sequences:
>Translated_287_residues MAFREVADRVWVARYEWFDVNVTLVGGDSGLLVVDTHASATAARAVVDDIRRLGAGTVIAVVNTHEHFDHTFGNGELRSA YGADLPIHAHEAAAERTVPAGERIQAAYDEEPDDPHREEVLATTIVPADRTFSSARVLDLGDRMVELVHPGRGHTAGDLV VRVPDADVLLAGDLVEESALRAGVPGFGEDCYPFDWPLSLDVVLTLTTPDSVVVPGHGAPVDRDFVEEQRNAIGVVAETI RDLAGRGVPVGQALEMGEWPYPRTELAAAVRRGYDQLPRSQKRLPLV >Mature_286_residues AFREVADRVWVARYEWFDVNVTLVGGDSGLLVVDTHASATAARAVVDDIRRLGAGTVIAVVNTHEHFDHTFGNGELRSAY GADLPIHAHEAAAERTVPAGERIQAAYDEEPDDPHREEVLATTIVPADRTFSSARVLDLGDRMVELVHPGRGHTAGDLVV RVPDADVLLAGDLVEESALRAGVPGFGEDCYPFDWPLSLDVVLTLTTPDSVVVPGHGAPVDRDFVEEQRNAIGVVAETIR DLAGRGVPVGQALEMGEWPYPRTELAAAVRRGYDQLPRSQKRLPLV
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31073; Mature: 30942
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFREVADRVWVARYEWFDVNVTLVGGDSGLLVVDTHASATAARAVVDDIRRLGAGTVIA CCHHHHHHHHEEEEEEEEEEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEE VVNTHEHFDHTFGNGELRSAYGADLPIHAHEAAAERTVPAGERIQAAYDEEPDDPHREEV EEECCHHHHCCCCCCCCCHHCCCCCCCCHHHHHHHCCCCCCCHHHECCCCCCCCCHHHHE LATTIVPADRTFSSARVLDLGDRMVELVHPGRGHTAGDLVVRVPDADVLLAGDLVEESAL EHHEECCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEECHHHHHHHH RAGVPGFGEDCYPFDWPLSLDVVLTLTTPDSVVVPGHGAPVDRDFVEEQRNAIGVVAETI HCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHH RDLAGRGVPVGQALEMGEWPYPRTELAAAVRRGYDQLPRSQKRLPLV HHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure AFREVADRVWVARYEWFDVNVTLVGGDSGLLVVDTHASATAARAVVDDIRRLGAGTVIA CHHHHHHHHEEEEEEEEEEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEE VVNTHEHFDHTFGNGELRSAYGADLPIHAHEAAAERTVPAGERIQAAYDEEPDDPHREEV EEECCHHHHCCCCCCCCCHHCCCCCCCCHHHHHHHCCCCCCCHHHECCCCCCCCCHHHHE LATTIVPADRTFSSARVLDLGDRMVELVHPGRGHTAGDLVVRVPDADVLLAGDLVEESAL EHHEECCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEECHHHHHHHH RAGVPGFGEDCYPFDWPLSLDVVLTLTTPDSVVVPGHGAPVDRDFVEEQRNAIGVVAETI HCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHH RDLAGRGVPVGQALEMGEWPYPRTELAAAVRRGYDQLPRSQKRLPLV HHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA