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The map label for this gene is 119716128

Identifier: 119716128

GI number: 119716128

Start: 2023424

End: 2024986

Strand: Direct

Name: 119716128

Synonym: Noca_1896

Alternate gene names: NA

Gene position: 2023424-2024986 (Clockwise)

Preceding gene: 119716127

Following gene: 119716129

Centisome position: 40.58

GC content: 77.8

Gene sequence:

>1563_bases
GTGCCGCGGGTGATGGCGATCTGGTGCCCGGACTGGCCGGTGGTCGCCGCGCTGGCCGACGAGGGCCTGCCGACCCACCT
GCCGGCGGCGGTCTTCAGCGCGAACATCGTGCAGGCGTGCAACGCCGGCGCCCGGGCCTTCGGCGTACGCCGCGGCATGC
GCCGGCGCGACGCGCAGGGCCGGTGCCCGGAGCTGAAGGTGTACGCCGCGATCCCCGACCGCGACGCCCGGGCCTTCGAG
CCGGTGCTGGCCGCGGTCGAGGAGCTGCGGCCCGGGGTGGCGCCGCTGCGGCCGGGCCTGGTGGCGCTGCGCGCGCCGGG
CCGGTTCTACGGCGGCGAGCCGGCGGCCGCGGCGCTGGTCGCCGAGCGGCTGGTGGGGCTCGGGGTCTGGGACTGCCGGG
TCGGGGTCGCTGACGAGCTGTTCACCGCCGAGCAGGCCGCCCGGCGAGCCGCCCCGCAGGACTGCTTCGTGGTCGAGCCG
GGGGAGTCGGTGCCGTTCCTGCGGGGGCTGCCCGTCGAGGTGATCGAGGACCTTCCCGACGGCCGCGACGCCGTCAGCCT
GCTCAAGCGGCTCGGGCTGCGCACCCTCGGCCAGCTCGGTGACCTGGCGGCGGCCGACGTGCGCGACCGGTTCGGCCGGC
AGGTGGCGTGGGTGCACCGGGTGGTCGGCGGGGACGGCGCCGAGCTGCTCGCGACCCGCATCCCGCCGCCGGAGCTGGCC
TGCCACGTCGACTTCGAGCCGCCACTGGACTCCGCCGAGACGATCGGCTTCAGCGTGCGGCAGACCGCGGACCGGTTCGT
CGCCGGGCTGGCCCGCCAGCACCTGGTCTGCACCGAGGTGCGGATCGAGGCCCGCTGCGAGGGCGAGGCCGAGCCGTCCT
GCTCGCGGGTCTGGCTGCACCCGCGGTGGTTCGGCGCCGCCGACCTGGTCGACCGGCTGCACTGGCAGCTCCAGGGGGCC
CGGTCCGGGGTGCCCGGCCGGGGCGGACAGGTGCGGGCACCGGTCGACCGGGTGGTCTTCGAGCCGGTGACCGTGGTCCC
GGACGCCGTGCACGCCGACGGACTGTGGGGCGGGACCGAGGAGCGGGTGGAGCGCGGCATCGCCCGGGTGCAGGGGCTGC
TCGGCCACGAGGCCGTGGTGCGGCCGGTGCTCCAGGGCGGCCGGTGCCCGGGCGACCGGCAGGCGTTCGTGCCGTGGGGG
GAGCGGCCCACCGGGCTGCGACCGACCGGTCCGCCGTGGCCGGGCAGCATCCCGCCGCCCGCGCCGTCACGTGTGCTGGC
GACGCCGTGGTCCGCCGAGGTCGTCGGTGCCACCGGCCGTCCCGTCGCCGTCGACGAGCGCGGGTCGGTCACCTGTGCGC
CGGAGCGGTTCCGGGTCGACCGCTCCGGCGGGTGGCAGCCGGTCGCCGCCTGGGCCGGCCCGTGGCCCATCGACGAGCTC
TGGTGGGAGGCGCCCCCGCGGCGCCGCAAGGTCGCGCGCTTCCAGGTGGTCGGCGTCGACGGCAGGGCCTGGTTGCTCAC
CTGCGAGGAGGGCGTGTGGTGGACCGAGGCGGCCTATGACTGA

Upstream 100 bases:

>100_bases
CGCCGCGCCGCGGTGCGCTGTGGTTCCCCGCCGAGGACCAGACCTACCGCCGCGCCGAGCCGCTCGTCGCCGCCACGCAG
TTGGTGGAGGAGGCCAGCTA

Downstream 100 bases:

>100_bases
CGAGGGAGTCGACTGATGGGCTGGTCCAACCCCCCGATCTCCTGGGGTGAGCTGGAGAAGCGGCTCTCCGGGCGGCTCAG
CACGCCCCAGGACCCCGAGG

Product: putative DNA-directed DNA polymerase

Products: NA

Alternate protein names: DNA-Directed DNA Polymerase; DNA-Repair Protein; DNA Polymerase; DNA Repair Polymerase; UMUC Domain Protein DNA-Repair Protein; DNA Repair Nucleotidyltransferase/DNA Polymerase; UMUC Domain-Containing Protein DNA-Repair Protein

Number of amino acids: Translated: 520; Mature: 519

Protein sequence:

>520_residues
MPRVMAIWCPDWPVVAALADEGLPTHLPAAVFSANIVQACNAGARAFGVRRGMRRRDAQGRCPELKVYAAIPDRDARAFE
PVLAAVEELRPGVAPLRPGLVALRAPGRFYGGEPAAAALVAERLVGLGVWDCRVGVADELFTAEQAARRAAPQDCFVVEP
GESVPFLRGLPVEVIEDLPDGRDAVSLLKRLGLRTLGQLGDLAAADVRDRFGRQVAWVHRVVGGDGAELLATRIPPPELA
CHVDFEPPLDSAETIGFSVRQTADRFVAGLARQHLVCTEVRIEARCEGEAEPSCSRVWLHPRWFGAADLVDRLHWQLQGA
RSGVPGRGGQVRAPVDRVVFEPVTVVPDAVHADGLWGGTEERVERGIARVQGLLGHEAVVRPVLQGGRCPGDRQAFVPWG
ERPTGLRPTGPPWPGSIPPPAPSRVLATPWSAEVVGATGRPVAVDERGSVTCAPERFRVDRSGGWQPVAAWAGPWPIDEL
WWEAPPRRRKVARFQVVGVDGRAWLLTCEEGVWWTEAAYD

Sequences:

>Translated_520_residues
MPRVMAIWCPDWPVVAALADEGLPTHLPAAVFSANIVQACNAGARAFGVRRGMRRRDAQGRCPELKVYAAIPDRDARAFE
PVLAAVEELRPGVAPLRPGLVALRAPGRFYGGEPAAAALVAERLVGLGVWDCRVGVADELFTAEQAARRAAPQDCFVVEP
GESVPFLRGLPVEVIEDLPDGRDAVSLLKRLGLRTLGQLGDLAAADVRDRFGRQVAWVHRVVGGDGAELLATRIPPPELA
CHVDFEPPLDSAETIGFSVRQTADRFVAGLARQHLVCTEVRIEARCEGEAEPSCSRVWLHPRWFGAADLVDRLHWQLQGA
RSGVPGRGGQVRAPVDRVVFEPVTVVPDAVHADGLWGGTEERVERGIARVQGLLGHEAVVRPVLQGGRCPGDRQAFVPWG
ERPTGLRPTGPPWPGSIPPPAPSRVLATPWSAEVVGATGRPVAVDERGSVTCAPERFRVDRSGGWQPVAAWAGPWPIDEL
WWEAPPRRRKVARFQVVGVDGRAWLLTCEEGVWWTEAAYD
>Mature_519_residues
PRVMAIWCPDWPVVAALADEGLPTHLPAAVFSANIVQACNAGARAFGVRRGMRRRDAQGRCPELKVYAAIPDRDARAFEP
VLAAVEELRPGVAPLRPGLVALRAPGRFYGGEPAAAALVAERLVGLGVWDCRVGVADELFTAEQAARRAAPQDCFVVEPG
ESVPFLRGLPVEVIEDLPDGRDAVSLLKRLGLRTLGQLGDLAAADVRDRFGRQVAWVHRVVGGDGAELLATRIPPPELAC
HVDFEPPLDSAETIGFSVRQTADRFVAGLARQHLVCTEVRIEARCEGEAEPSCSRVWLHPRWFGAADLVDRLHWQLQGAR
SGVPGRGGQVRAPVDRVVFEPVTVVPDAVHADGLWGGTEERVERGIARVQGLLGHEAVVRPVLQGGRCPGDRQAFVPWGE
RPTGLRPTGPPWPGSIPPPAPSRVLATPWSAEVVGATGRPVAVDERGSVTCAPERFRVDRSGGWQPVAAWAGPWPIDELW
WEAPPRRRKVARFQVVGVDGRAWLLTCEEGVWWTEAAYD

Specific function: Unknown

COG id: COG0389

COG function: function code L; Nucleotidyltransferase/DNA polymerase involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56361; Mature: 56230

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50173 UMUC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRVMAIWCPDWPVVAALADEGLPTHLPAAVFSANIVQACNAGARAFGVRRGMRRRDAQG
CCCEEEEECCCCCEEHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
RCPELKVYAAIPDRDARAFEPVLAAVEELRPGVAPLRPGLVALRAPGRFYGGEPAAAALV
CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHH
AERLVGLGVWDCRVGVADELFTAEQAARRAAPQDCFVVEPGESVPFLRGLPVEVIEDLPD
HHHHHHCCEEEECCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHCCCCHHHHHCCCC
GRDAVSLLKRLGLRTLGQLGDLAAADVRDRFGRQVAWVHRVVGGDGAELLATRIPPPELA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHEECCCCCCEE
CHVDFEPPLDSAETIGFSVRQTADRFVAGLARQHLVCTEVRIEARCEGEAEPSCSRVWLH
EEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCEEEEEEEEEEEECCCCCCCCCEEEEC
PRWFGAADLVDRLHWQLQGARSGVPGRGGQVRAPVDRVVFEPVTVVPDAVHADGLWGGTE
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHCCHHCCCCCCCCCCCCCCCH
ERVERGIARVQGLLGHEAVVRPVLQGGRCPGDRQAFVPWGERPTGLRPTGPPWPGSIPPP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCC
APSRVLATPWSAEVVGATGRPVAVDERGSVTCAPERFRVDRSGGWQPVAAWAGPWPIDEL
CCCCEEECCCCCEEECCCCCEEEECCCCCEEECHHHEEECCCCCCCEEECCCCCCCHHHH
WWEAPPRRRKVARFQVVGVDGRAWLLTCEEGVWWTEAAYD
HCCCCHHHCCEEEEEEEEECCCEEEEEECCCCEEECCCCC
>Mature Secondary Structure 
PRVMAIWCPDWPVVAALADEGLPTHLPAAVFSANIVQACNAGARAFGVRRGMRRRDAQG
CCEEEEECCCCCEEHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
RCPELKVYAAIPDRDARAFEPVLAAVEELRPGVAPLRPGLVALRAPGRFYGGEPAAAALV
CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHH
AERLVGLGVWDCRVGVADELFTAEQAARRAAPQDCFVVEPGESVPFLRGLPVEVIEDLPD
HHHHHHCCEEEECCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHCCCCHHHHHCCCC
GRDAVSLLKRLGLRTLGQLGDLAAADVRDRFGRQVAWVHRVVGGDGAELLATRIPPPELA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHEECCCCCCEE
CHVDFEPPLDSAETIGFSVRQTADRFVAGLARQHLVCTEVRIEARCEGEAEPSCSRVWLH
EEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCEEEEEEEEEEEECCCCCCCCCEEEEC
PRWFGAADLVDRLHWQLQGARSGVPGRGGQVRAPVDRVVFEPVTVVPDAVHADGLWGGTE
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHCCHHCCCCCCCCCCCCCCCH
ERVERGIARVQGLLGHEAVVRPVLQGGRCPGDRQAFVPWGERPTGLRPTGPPWPGSIPPP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCC
APSRVLATPWSAEVVGATGRPVAVDERGSVTCAPERFRVDRSGGWQPVAAWAGPWPIDEL
CCCCEEECCCCCEEECCCCCEEEECCCCCEEECHHHEEECCCCCCCEEECCCCCCCHHHH
WWEAPPRRRKVARFQVVGVDGRAWLLTCEEGVWWTEAAYD
HCCCCHHHCCEEEEEEEEECCCEEEEEECCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA