| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716127
Identifier: 119716127
GI number: 119716127
Start: 2022738
End: 2023424
Strand: Direct
Name: 119716127
Synonym: Noca_1895
Alternate gene names: NA
Gene position: 2022738-2023424 (Clockwise)
Preceding gene: 119716126
Following gene: 119716128
Centisome position: 40.57
GC content: 77.87
Gene sequence:
>687_bases GTGGGCACCTCGACCGGCACCGCGAGCACCGCGGACACCATCGCGCAGCTGCGCAACCGGATGGCGCGCATGCACGACGG GGTCCCGCGGCTGCCGCTGGAGACCCACCCGGTGCTCGCCGGGCTGGTCCAGCTGCGGGCCGGGGGCAGCTACGCCGTCG ACAGCGCGAGCCTGGCGCTTGCGCTGATGGCCGGCCCGTCGCGGGCCGGTGGCTGGTGCGCGGTCGTGGGCGTGGGCGAC TTCGGCGCGGAGGCGGCGTACGCGCTCGGTGTCGACCTGGGCCGCACCGTGCTGGTCCCCGACCCCGGAGACCAGTGGCT GGAGGTCACCGCCGCGCTCGTGGACGTCGCCACGGTCGTGGTGATCAGCCCGCCAGGCCGGGTCACCGAGCCGGTCGCCG ACCGGCTGGCGGCCCGGCTCCGCAAGCGTTCGGCCGCCCTGGTCGCCCGGGAGCGGACACCGGGGGACTGGCCGCGCTGC GAGGTGCGGCTGACCACCCGCGAGCCCGCCTGGTCCGGCGCCGGCGCCGGGCACGGGCACCTGCGGTCTCGGAGGCTGGT CGTCGAGGCGCAGCGCGGCACGGCGCCGCCGCGCCGCGGTGCGCTGTGGTTCCCCGCCGAGGACCAGACCTACCGCCGCG CCGAGCCGCTCGTCGCCGCCACGCAGTTGGTGGAGGAGGCCAGCTAG
Upstream 100 bases:
>100_bases TGTACCAGGGCTGACACGCCCCGCGGGCTCAGTTCAGTTGGTTGCAGCCGAAACCTCGCCCCCCGATTGACTCGATCGAA CACATGTTCGATGATGGGGT
Downstream 100 bases:
>100_bases TGCCGCGGGTGATGGCGATCTGGTGCCCGGACTGGCCGGTGGTCGCCGCGCTGGCCGACGAGGGCCTGCCGACCCACCTG CCGGCGGCGGTCTTCAGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MGTSTGTASTADTIAQLRNRMARMHDGVPRLPLETHPVLAGLVQLRAGGSYAVDSASLALALMAGPSRAGGWCAVVGVGD FGAEAAYALGVDLGRTVLVPDPGDQWLEVTAALVDVATVVVISPPGRVTEPVADRLAARLRKRSAALVARERTPGDWPRC EVRLTTREPAWSGAGAGHGHLRSRRLVVEAQRGTAPPRRGALWFPAEDQTYRRAEPLVAATQLVEEAS
Sequences:
>Translated_228_residues MGTSTGTASTADTIAQLRNRMARMHDGVPRLPLETHPVLAGLVQLRAGGSYAVDSASLALALMAGPSRAGGWCAVVGVGD FGAEAAYALGVDLGRTVLVPDPGDQWLEVTAALVDVATVVVISPPGRVTEPVADRLAARLRKRSAALVARERTPGDWPRC EVRLTTREPAWSGAGAGHGHLRSRRLVVEAQRGTAPPRRGALWFPAEDQTYRRAEPLVAATQLVEEAS >Mature_227_residues GTSTGTASTADTIAQLRNRMARMHDGVPRLPLETHPVLAGLVQLRAGGSYAVDSASLALALMAGPSRAGGWCAVVGVGDF GAEAAYALGVDLGRTVLVPDPGDQWLEVTAALVDVATVVVISPPGRVTEPVADRLAARLRKRSAALVARERTPGDWPRCE VRLTTREPAWSGAGAGHGHLRSRRLVVEAQRGTAPPRRGALWFPAEDQTYRRAEPLVAATQLVEEAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24024; Mature: 23892
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTSTGTASTADTIAQLRNRMARMHDGVPRLPLETHPVLAGLVQLRAGGSYAVDSASLAL CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEECHHHEEE ALMAGPSRAGGWCAVVGVGDFGAEAAYALGVDLGRTVLVPDPGDQWLEVTAALVDVATVV EEEECCCCCCCEEEEEECCCCCCHHHEEEECCCCCEEEECCCCHHHHHHHHHHHHHEEEE VISPPGRVTEPVADRLAARLRKRSAALVARERTPGDWPRCEVRLTTREPAWSGAGAGHGH EECCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCC LRSRRLVVEAQRGTAPPRRGALWFPAEDQTYRRAEPLVAATQLVEEAS CCCCEEEEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GTSTGTASTADTIAQLRNRMARMHDGVPRLPLETHPVLAGLVQLRAGGSYAVDSASLAL CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEECHHHEEE ALMAGPSRAGGWCAVVGVGDFGAEAAYALGVDLGRTVLVPDPGDQWLEVTAALVDVATVV EEEECCCCCCCEEEEEECCCCCCHHHEEEECCCCCEEEECCCCHHHHHHHHHHHHHEEEE VISPPGRVTEPVADRLAARLRKRSAALVARERTPGDWPRCEVRLTTREPAWSGAGAGHGH EECCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCC LRSRRLVVEAQRGTAPPRRGALWFPAEDQTYRRAEPLVAATQLVEEAS CCCCEEEEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA