| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is yflK [H]
Identifier: 119716125
GI number: 119716125
Start: 2020069
End: 2020725
Strand: Direct
Name: yflK [H]
Synonym: Noca_1893
Alternate gene names: 119716125
Gene position: 2020069-2020725 (Clockwise)
Preceding gene: 119716124
Following gene: 119716126
Centisome position: 40.52
GC content: 72.75
Gene sequence:
>657_bases ATGGCCGTCGTGGGCATCCTGCACTCCGTCAACGTGGGCCGCGACCGGGACGCGCCGTACGCGAACCTGGGGCACTCCGG CATGAACAAGCAGCCGGTCGCGGGCCGGGTGGCCGTGCGCGCCCTCGGACTCGACGGGGACCAGGTGGGCGACACCGTCC ACCACGGTGGCGTCGACCAGGCGGTGTACGTCTTCGCCCGCGAGGACCTGGACCGGTGGGCGGTCGAGCTCGGGCAGGAC ATCCGGGACGGGATGTTCGCGGAGAACCTCACCACCCGGGGCATCGACGTCAACGAGGCCGAGGTCGGGGAGCGGTGGCG GATCGGCACCGCGGAGCTCGAGGTCGCCAGCGTGCGGATCCCGTGCAACGACTTCAAGAGCTGGATGGGCGTGGGCGGCT ACGACAACCGGGCCTGGGTGAAGCGGTTCGCCGCCACCGGGCGGCCCGGGCCCTACCTGCGGGTGCTCGTGGAGGGCGAG GTCGGTGCCGGCGACGAGATCGCGGTGGTCCACCGGCCCGGGCACGGGGTCACGGTGTCGACGATGTTCCGGGCGCTGAC GACCGAGACCGACCTGCTGCCGGACCTCCTGCGCGTCGAGGGACTGGTCGAGCAGGCCCGGGTGACGGCCGAGAAGTACG TCGCGGCGCGCGGCTGA
Upstream 100 bases:
>100_bases ACCCGCCCGGGGTGCACCGGAGCACCCCGACCGGGGAGTACCTGACCCGGTGCGTGACCGTGGCGAAATCGGTGCAGGAT TGACTGCGGGTGCTGGGAGG
Downstream 100 bases:
>100_bases GGGGGTTTTGCTACCCGCGAGTTGCGTTGGTGATCTAGGTTACTGCGCAACCCCGTCCTTCTCGGCAGCACTGCAGGAGA GTCCATGACCGCCCAAGCCA
Product: MOSC domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MAVVGILHSVNVGRDRDAPYANLGHSGMNKQPVAGRVAVRALGLDGDQVGDTVHHGGVDQAVYVFAREDLDRWAVELGQD IRDGMFAENLTTRGIDVNEAEVGERWRIGTAELEVASVRIPCNDFKSWMGVGGYDNRAWVKRFAATGRPGPYLRVLVEGE VGAGDEIAVVHRPGHGVTVSTMFRALTTETDLLPDLLRVEGLVEQARVTAEKYVAARG
Sequences:
>Translated_218_residues MAVVGILHSVNVGRDRDAPYANLGHSGMNKQPVAGRVAVRALGLDGDQVGDTVHHGGVDQAVYVFAREDLDRWAVELGQD IRDGMFAENLTTRGIDVNEAEVGERWRIGTAELEVASVRIPCNDFKSWMGVGGYDNRAWVKRFAATGRPGPYLRVLVEGE VGAGDEIAVVHRPGHGVTVSTMFRALTTETDLLPDLLRVEGLVEQARVTAEKYVAARG >Mature_217_residues AVVGILHSVNVGRDRDAPYANLGHSGMNKQPVAGRVAVRALGLDGDQVGDTVHHGGVDQAVYVFAREDLDRWAVELGQDI RDGMFAENLTTRGIDVNEAEVGERWRIGTAELEVASVRIPCNDFKSWMGVGGYDNRAWVKRFAATGRPGPYLRVLVEGEV GAGDEIAVVHRPGHGVTVSTMFRALTTETDLLPDLLRVEGLVEQARVTAEKYVAARG
Specific function: Unknown
COG id: COG2258
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 MOSC domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005163 - InterPro: IPR005302 - InterPro: IPR015808 - InterPro: IPR011037 [H]
Pfam domain/function: PF03475 3-alpha; PF03473 MOSC [H]
EC number: NA
Molecular weight: Translated: 23617; Mature: 23486
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVVGILHSVNVGRDRDAPYANLGHSGMNKQPVAGRVAVRALGLDGDQVGDTVHHGGVDQ CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHCCHHHCCCCCC AVYVFAREDLDRWAVELGQDIRDGMFAENLTTRGIDVNEAEVGERWRIGTAELEVASVRI EEEEEEHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHCCCEEECCCCEEEEEEEEC PCNDFKSWMGVGGYDNRAWVKRFAATGRPGPYLRVLVEGEVGAGDEIAVVHRPGHGVTVS CHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEECCCCCEEHH TMFRALTTETDLLPDLLRVEGLVEQARVTAEKYVAARG HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AVVGILHSVNVGRDRDAPYANLGHSGMNKQPVAGRVAVRALGLDGDQVGDTVHHGGVDQ CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHCCHHHCCCCCC AVYVFAREDLDRWAVELGQDIRDGMFAENLTTRGIDVNEAEVGERWRIGTAELEVASVRI EEEEEEHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHCCCEEECCCCEEEEEEEEC PCNDFKSWMGVGGYDNRAWVKRFAATGRPGPYLRVLVEGEVGAGDEIAVVHRPGHGVTVS CHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEECCCCCEEHH TMFRALTTETDLLPDLLRVEGLVEQARVTAEKYVAARG HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9272861; 9384377 [H]