| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716114
Identifier: 119716114
GI number: 119716114
Start: 2003855
End: 2005318
Strand: Reverse
Name: 119716114
Synonym: Noca_1882
Alternate gene names: NA
Gene position: 2005318-2003855 (Counterclockwise)
Preceding gene: 119716121
Following gene: 119716113
Centisome position: 40.22
GC content: 72.27
Gene sequence:
>1464_bases ATGCACGTGGTCGTGATCGGCGCCGGGTTCGGTGGGCTGGGAATGGCTCATGCCCTCAGGCAGGCAGGAGTCACGGACGT GACGGTCCTGGAGCGGGCCGACGAGATCGGCGGCGTGTGGCGGGACAACACCTATCCCGGCGCCGCGTGCGACGTCCCCT CGCCGCTCTACTCCTGGTCCTGGGCGACCAACCCGGAGTGGGGACGGCGGTACTCACCGCAGCCGGAGATCCTCGACTAC ATCCGGCGCACCGCCGCCGCGGACGGCCTGCTGGAGCTGGTGCGCACGGGCGTCGAGGTCTCCGCGGTCGAGTACGACGA CGCCACGTCGACCTGGCGGGTCACCACCAGCACCGGGACGGTGACGGCCGACCTGGTGGTCTCGGCAGTGGGACAGCTGT CGAACCCGGTGGTGCCGGCGATCCCGGGGGCGTCGACGTTCGCCGGCCCGGCCTTCCACTCGGCACACTGGCGCCACGAC GTGGACCTGACCGGGAAGCGGGTCGCCGTGGTCGGCACCGGCGCCAGCGCGATCCAGTTCGTGCCCGGGATCGTGGACCG GGTCGGCGCGATCACGATCTTCCAGCGGTCCGCGCCGTACGTCGTCCCCAAGCCGGACCAGGCCTACCGACCGCGCCACC ACCGGCTGTTCCGCCGGTGGCCGGGGATCCCGGCTGCCGAGCGCCGCGCGGTGTACTGGCTCACCGAGCGACTCAACGGC GCGCTGGCCGGTGAGTCGCCGATCTCACGGCCGATGATCGCCGCGCTGCGGGCCGCGTGGCGGCTCCAGCTCCGGCGCCA GGTCCGGGACCCCGAGCTGCGTCACAGGCTGGTGCCCGACTACCCGATCGGCTGCAAGCGCCTGCTGTTCTCCAACGACT GGTACCCCGCGCTGGACCGTGATCACGTCGAGGTCGTGACCGACCGGATCACCGGCATCGAGCCGGCCGGCGTGCGCACC GCCGACGGTGCCCTGCACGAGGCGGACGTGCTGATCTGGGGCACCGGCTTCGCCGCGACCGAGTTCCTGGCCGGCATCGA CGTGCGCGGCGCGGGCGGGGTCTCGCTCAAGGAGTTGTGGGCGGACGGCGCCCGCGCCCACCTGGGGCTGACCGTGCCGG GCTTCCCCAACCTGTTCTGCGTCTACGGACCCAACACCAACCTCGGCGGCAGCTCGATCATCGCGATGATGGAGGCCCAG GCCGGCTGGATCGCCCAGGTCGCCCGCCGGATCGCCGACGGCCGCGCGCACCGGGTCGCCGTGCGCCGCGACGTCTGGGA GGTCTACGACCGGGAGATGCAGGGGCGGCTCGGCGAGAGCGTGTGGGCAGGATGCGACAGCTGGTACGTCGACGGCGACC GGATCACCACCAACTGGCCGGGCCTGGTCACCGAGTACAAGCAGCGCACCGCGACCGTCGACTGGAGCGAGCTGCAGGAG GTCGACCTGCAGCGGGCGAAATAG
Upstream 100 bases:
>100_bases CATGGACCGGAACCTAGGGACCGCAGGTGCCGTCTCGGCGGGAGGAACGTGACCCGCACGTGAACGACGGCCGACGACCC GGACCGCTACGGTCTGCACC
Downstream 100 bases:
>100_bases CCAGACGCGCCGTTCTGGTAGCCCGTTCGGGTCATGTGGGTCCCCGGGATCTGGCCTTTGCTGGGGCTGACCATCCCCTC CAGACCTCAAGAACGGCGGC
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 487; Mature: 487
Protein sequence:
>487_residues MHVVVIGAGFGGLGMAHALRQAGVTDVTVLERADEIGGVWRDNTYPGAACDVPSPLYSWSWATNPEWGRRYSPQPEILDY IRRTAAADGLLELVRTGVEVSAVEYDDATSTWRVTTSTGTVTADLVVSAVGQLSNPVVPAIPGASTFAGPAFHSAHWRHD VDLTGKRVAVVGTGASAIQFVPGIVDRVGAITIFQRSAPYVVPKPDQAYRPRHHRLFRRWPGIPAAERRAVYWLTERLNG ALAGESPISRPMIAALRAAWRLQLRRQVRDPELRHRLVPDYPIGCKRLLFSNDWYPALDRDHVEVVTDRITGIEPAGVRT ADGALHEADVLIWGTGFAATEFLAGIDVRGAGGVSLKELWADGARAHLGLTVPGFPNLFCVYGPNTNLGGSSIIAMMEAQ AGWIAQVARRIADGRAHRVAVRRDVWEVYDREMQGRLGESVWAGCDSWYVDGDRITTNWPGLVTEYKQRTATVDWSELQE VDLQRAK
Sequences:
>Translated_487_residues MHVVVIGAGFGGLGMAHALRQAGVTDVTVLERADEIGGVWRDNTYPGAACDVPSPLYSWSWATNPEWGRRYSPQPEILDY IRRTAAADGLLELVRTGVEVSAVEYDDATSTWRVTTSTGTVTADLVVSAVGQLSNPVVPAIPGASTFAGPAFHSAHWRHD VDLTGKRVAVVGTGASAIQFVPGIVDRVGAITIFQRSAPYVVPKPDQAYRPRHHRLFRRWPGIPAAERRAVYWLTERLNG ALAGESPISRPMIAALRAAWRLQLRRQVRDPELRHRLVPDYPIGCKRLLFSNDWYPALDRDHVEVVTDRITGIEPAGVRT ADGALHEADVLIWGTGFAATEFLAGIDVRGAGGVSLKELWADGARAHLGLTVPGFPNLFCVYGPNTNLGGSSIIAMMEAQ AGWIAQVARRIADGRAHRVAVRRDVWEVYDREMQGRLGESVWAGCDSWYVDGDRITTNWPGLVTEYKQRTATVDWSELQE VDLQRAK >Mature_487_residues MHVVVIGAGFGGLGMAHALRQAGVTDVTVLERADEIGGVWRDNTYPGAACDVPSPLYSWSWATNPEWGRRYSPQPEILDY IRRTAAADGLLELVRTGVEVSAVEYDDATSTWRVTTSTGTVTADLVVSAVGQLSNPVVPAIPGASTFAGPAFHSAHWRHD VDLTGKRVAVVGTGASAIQFVPGIVDRVGAITIFQRSAPYVVPKPDQAYRPRHHRLFRRWPGIPAAERRAVYWLTERLNG ALAGESPISRPMIAALRAAWRLQLRRQVRDPELRHRLVPDYPIGCKRLLFSNDWYPALDRDHVEVVTDRITGIEPAGVRT ADGALHEADVLIWGTGFAATEFLAGIDVRGAGGVSLKELWADGARAHLGLTVPGFPNLFCVYGPNTNLGGSSIIAMMEAQ AGWIAQVARRIADGRAHRVAVRRDVWEVYDREMQGRLGESVWAGCDSWYVDGDRITTNWPGLVTEYKQRTATVDWSELQE VDLQRAK
Specific function: Unknown
COG id: COG2072
COG function: function code P; Predicted flavoprotein involved in K+ transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FAD-binding monooxygenase family [H]
Homologues:
Organism=Homo sapiens, GI4503755, Length=311, Percent_Identity=26.3665594855305, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI4503757, Length=477, Percent_Identity=23.2704402515723, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI221316678, Length=185, Percent_Identity=28.6486486486486, Blast_Score=67, Evalue=4e-11, Organism=Homo sapiens, GI221316674, Length=185, Percent_Identity=28.6486486486486, Blast_Score=66, Evalue=6e-11, Organism=Homo sapiens, GI221316672, Length=185, Percent_Identity=28.6486486486486, Blast_Score=66, Evalue=7e-11, Organism=Caenorhabditis elegans, GI25145785, Length=269, Percent_Identity=23.0483271375465, Blast_Score=72, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020946 [H]
Pfam domain/function: PF00743 FMO-like [H]
EC number: NA
Molecular weight: Translated: 53423; Mature: 53423
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHVVVIGAGFGGLGMAHALRQAGVTDVTVLERADEIGGVWRDNTYPGAACDVPSPLYSWS CEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCC WATNPEWGRRYSPQPEILDYIRRTAAADGLLELVRTGVEVSAVEYDDATSTWRVTTSTGT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEECCCC VTADLVVSAVGQLSNPVVPAIPGASTFAGPAFHSAHWRHDVDLTGKRVAVVGTGASAIQF CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHH VPGIVDRVGAITIFQRSAPYVVPKPDQAYRPRHHRLFRRWPGIPAAERRAVYWLTERLNG HHHHHHHHCEEEEEECCCCEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHHEEEHHHHCC ALAGESPISRPMIAALRAAWRLQLRRQVRDPELRHRLVPDYPIGCKRLLFSNDWYPALDR CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHCCCCCCCCCCC DHVEVVTDRITGIEPAGVRTADGALHEADVLIWGTGFAATEFLAGIDVRGAGGVSLKELW CHHHHHHHHHCCCCCCCCCCCCCCCEECCEEEEECCHHHHHHHHCCCCCCCCCCCHHHHH ADGARAHLGLTVPGFPNLFCVYGPNTNLGGSSIIAMMEAQAGWIAQVARRIADGRAHRVA CCCCCEEEEEECCCCCCEEEEECCCCCCCCHHEEEEHHHCCCHHHHHHHHHHCCCHHHHH VRRDVWEVYDREMQGRLGESVWAGCDSWYVDGDRITTNWPGLVTEYKQRTATVDWSELQE HHHHHHHHHHHHHHHHHCHHHHCCCCCEEECCCEEECCCCCHHHHHHHHHCCCCHHHHHH VDLQRAK HHHHCCC >Mature Secondary Structure MHVVVIGAGFGGLGMAHALRQAGVTDVTVLERADEIGGVWRDNTYPGAACDVPSPLYSWS CEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCC WATNPEWGRRYSPQPEILDYIRRTAAADGLLELVRTGVEVSAVEYDDATSTWRVTTSTGT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEECCCC VTADLVVSAVGQLSNPVVPAIPGASTFAGPAFHSAHWRHDVDLTGKRVAVVGTGASAIQF CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHH VPGIVDRVGAITIFQRSAPYVVPKPDQAYRPRHHRLFRRWPGIPAAERRAVYWLTERLNG HHHHHHHHCEEEEEECCCCEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHHEEEHHHHCC ALAGESPISRPMIAALRAAWRLQLRRQVRDPELRHRLVPDYPIGCKRLLFSNDWYPALDR CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHCCCCCCCCCCC DHVEVVTDRITGIEPAGVRTADGALHEADVLIWGTGFAATEFLAGIDVRGAGGVSLKELW CHHHHHHHHHCCCCCCCCCCCCCCCEECCEEEEECCHHHHHHHHCCCCCCCCCCCHHHHH ADGARAHLGLTVPGFPNLFCVYGPNTNLGGSSIIAMMEAQAGWIAQVARRIADGRAHRVA CCCCCEEEEEECCCCCCEEEEECCCCCCCCHHEEEEHHHCCCHHHHHHHHHHCCCHHHHH VRRDVWEVYDREMQGRLGESVWAGCDSWYVDGDRITTNWPGLVTEYKQRTATVDWSELQE HHHHHHHHHHHHHHHHHCHHHHCCCCCEEECCCEEECCCCCHHHHHHHHHCCCCHHHHHH VDLQRAK HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]