| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716113
Identifier: 119716113
GI number: 119716113
Start: 2003395
End: 2003709
Strand: Reverse
Name: 119716113
Synonym: Noca_1881
Alternate gene names: NA
Gene position: 2003709-2003395 (Counterclockwise)
Preceding gene: 119716114
Following gene: 119716110
Centisome position: 40.19
GC content: 68.25
Gene sequence:
>315_bases ATGTTCGGCACCGGCGACCTGGGGATCGTGCGCGCCTACGCGTGGAACAGCTCCCCGAGCGCCAGCGCGAACCTGACCAA CAACGGCTACACCTGCAACCGGTCCGGCGGCACCGTGAACGTCGTGCACAACAGCACCGGCAGCTACGCGATCACCTTCG CCGGGCTGAACCTCAACGGCGGCAACGTCGTCGTCTCCGGCTACGGCGGCACCCCGACCTGGTGCACGATCGGCTCCTGG GGGAACAGCAGCGTGAGCGTGTACTGCTTCGACGCCGCGGGGCCCCGGTCGACAGCTACTGGACGATCGCGGTGA
Upstream 100 bases:
>100_bases GGGATCTGGCCTTTGCTGGGGCTGACCATCCCCTCCAGACCTCAAGAACGGCGGCGTCACCGGGACCGACCTCGCCGACG GCGCAGTCGACAGGTCGAGC
Downstream 100 bases:
>100_bases GCGACTAGGCGACCGACCCCATGACCGGTGCCGGCGGGACGGGGGCCCGCCGGCACCAGCGGTCACCAACCATCAGCTCC TGTTGGCGGCCTCGAGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 104
Protein sequence:
>104_residues MFGTGDLGIVRAYAWNSSPSASANLTNNGYTCNRSGGTVNVVHNSTGSYAITFAGLNLNGGNVVVSGYGGTPTWCTIGSW GNSSVSVYCFDAAGPRSTATGRSR
Sequences:
>Translated_104_residues MFGTGDLGIVRAYAWNSSPSASANLTNNGYTCNRSGGTVNVVHNSTGSYAITFAGLNLNGGNVVVSGYGGTPTWCTIGSW GNSSVSVYCFDAAGPRSTATGRSR >Mature_104_residues MFGTGDLGIVRAYAWNSSPSASANLTNNGYTCNRSGGTVNVVHNSTGSYAITFAGLNLNGGNVVVSGYGGTPTWCTIGSW GNSSVSVYCFDAAGPRSTATGRSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10595; Mature: 10595
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGTGDLGIVRAYAWNSSPSASANLTNNGYTCNRSGGTVNVVHNSTGSYAITFAGLNLNG CCCCCCEEEEEEEEECCCCCCCEEECCCCEEEECCCCEEEEEECCCCCEEEEEEEEEECC GNVVVSGYGGTPTWCTIGSWGNSSVSVYCFDAAGPRSTATGRSR CEEEEECCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCC >Mature Secondary Structure MFGTGDLGIVRAYAWNSSPSASANLTNNGYTCNRSGGTVNVVHNSTGSYAITFAGLNLNG CCCCCCEEEEEEEEECCCCCCCEEECCCCEEEECCCCEEEEEECCCCCEEEEEEEEEECC GNVVVSGYGGTPTWCTIGSWGNSSVSVYCFDAAGPRSTATGRSR CEEEEECCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA