Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is braE [H]

Identifier: 119716072

GI number: 119716072

Start: 1963098

End: 1964150

Strand: Direct

Name: braE [H]

Synonym: Noca_1839

Alternate gene names: 119716072

Gene position: 1963098-1964150 (Clockwise)

Preceding gene: 119716071

Following gene: 119716073

Centisome position: 39.37

GC content: 67.24

Gene sequence:

>1053_bases
ATGTTGGGCTTCCTTCCTCGCCCGGTGATCCGGGCAGCGTTCGTCGGGCTCGTGGTGCTGGCCTTCCTGCTCCCGAACCT
GACCCAGCCGTACACCATCCGCGTTGCCGCGACGATCCTGGTGTTCACCGTCTTCGCGACCGGGCTCAACCTGATCCTCG
GGTTCGCCGGGCTGCTCAGCTTCGGACACGCCGCGATGTTCGGTGCCGGCGCCTACATCTCGGCGCGACTGCTCCTGGAC
ACCGGAATGCCGCTGCTGGCGGTCATGGTGATCTCGGTCCTCGGCAGCGCCGTGTTCGGTCTGCTGGTCGGACTGACCTC
GTGGCGGGTCGGCGGCGACTACCTCGCCCTGATCACCCTCGGGGTGGGGCAGATCTTCTACCTCTACCTCAACAACGCCA
AGGAGGTGACCGGCGGCGCGACCGGCCTCCCCGGCATCCCGGCCGGCAACTTCTTCGGCTGGGACCTGGCGTTGATCGAG
AACATCTACCTCTTCATCCTGGTGGTCACGATCGTGACCACCGCGTTCGCGTGGCTCATCGGCCGCTCCTTCCTCGGCCG
TGCGTTCCTCGCGATCCGCGAGGACGAGGTGATTGCCCGGGCCCACGGCATCAACGTCCCGCTCACCAAGGTGATCGGGT
TCGGCATCGGGAGCGGGATCGCCGGCCTGGCCGGCGTGCTGCAGGTGCTGCTGCTCGGCTTCGTCGGTCCGGCGACCTTC
AACGTCGACCAGTCCATCCTCATCGTCGAGGTCGTCCTGATCGGCGGGATGGCGACGACGGCCGGCCCGCTGCTCGGTTC
GCTCCTGGTGATCGGGTCGACCGAGTACCTGCGGGCGCTCGCCGACTACCGCTCGATGATCTTCGGTGCCCTGATCCTGA
TCGTGCTGCTCTGGAAGCCCGGCGGCCTGGTGCAGATCCTCGGGATCGGTGACACCAGATCGTCGAGCTACAAGTTCCCG
TTCTCCCTGTTCGGCCGGCGTCGCACGGCCGGTGAGACGACGCCCAACACCCACGCTCGGGTCGAACCGATCGCCGAGGA
GGTGCGGCCATGA

Upstream 100 bases:

>100_bases
CCGGGTCCTACCGCGACGCGATCGCCTTCTTCCTGCTGATCGTCATTCTGCTCGTCCGCCCCGCCGGCCTGCTCGGCGCC
CGTGTCCAGGAGCGTGTGTG

Downstream 100 bases:

>100_bases
CCGCCGCCACGCTGGACGCTCCGATCTTCAAGGCCACCGATGTCGGCTGCCGCTTCGGCGGCGTCGTGGCCCTGGACAAG
GTCGACTTCGAGGTCGGGCA

Product: inner-membrane translocator

Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MLGFLPRPVIRAAFVGLVVLAFLLPNLTQPYTIRVAATILVFTVFATGLNLILGFAGLLSFGHAAMFGAGAYISARLLLD
TGMPLLAVMVISVLGSAVFGLLVGLTSWRVGGDYLALITLGVGQIFYLYLNNAKEVTGGATGLPGIPAGNFFGWDLALIE
NIYLFILVVTIVTTAFAWLIGRSFLGRAFLAIREDEVIARAHGINVPLTKVIGFGIGSGIAGLAGVLQVLLLGFVGPATF
NVDQSILIVEVVLIGGMATTAGPLLGSLLVIGSTEYLRALADYRSMIFGALILIVLLWKPGGLVQILGIGDTRSSSYKFP
FSLFGRRRTAGETTPNTHARVEPIAEEVRP

Sequences:

>Translated_350_residues
MLGFLPRPVIRAAFVGLVVLAFLLPNLTQPYTIRVAATILVFTVFATGLNLILGFAGLLSFGHAAMFGAGAYISARLLLD
TGMPLLAVMVISVLGSAVFGLLVGLTSWRVGGDYLALITLGVGQIFYLYLNNAKEVTGGATGLPGIPAGNFFGWDLALIE
NIYLFILVVTIVTTAFAWLIGRSFLGRAFLAIREDEVIARAHGINVPLTKVIGFGIGSGIAGLAGVLQVLLLGFVGPATF
NVDQSILIVEVVLIGGMATTAGPLLGSLLVIGSTEYLRALADYRSMIFGALILIVLLWKPGGLVQILGIGDTRSSSYKFP
FSLFGRRRTAGETTPNTHARVEPIAEEVRP
>Mature_350_residues
MLGFLPRPVIRAAFVGLVVLAFLLPNLTQPYTIRVAATILVFTVFATGLNLILGFAGLLSFGHAAMFGAGAYISARLLLD
TGMPLLAVMVISVLGSAVFGLLVGLTSWRVGGDYLALITLGVGQIFYLYLNNAKEVTGGATGLPGIPAGNFFGWDLALIE
NIYLFILVVTIVTTAFAWLIGRSFLGRAFLAIREDEVIARAHGINVPLTKVIGFGIGSGIAGLAGVLQVLLLGFVGPATF
NVDQSILIVEVVLIGGMATTAGPLLGSLLVIGSTEYLRALADYRSMIFGALILIVLLWKPGGLVQILGIGDTRSSSYKFP
FSLFGRRRTAGETTPNTHARVEPIAEEVRP

Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]

COG id: COG4177

COG function: function code E; ABC-type branched-chain amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789865, Length=303, Percent_Identity=30.3630363036304, Blast_Score=139, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR021807 [H]

Pfam domain/function: PF02653 BPD_transp_2; PF11862 DUF3382 [H]

EC number: NA

Molecular weight: Translated: 36966; Mature: 36966

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGFLPRPVIRAAFVGLVVLAFLLPNLTQPYTIRVAATILVFTVFATGLNLILGFAGLLS
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGHAAMFGAGAYISARLLLDTGMPLLAVMVISVLGSAVFGLLVGLTSWRVGGDYLALITL
HHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
GVGQIFYLYLNNAKEVTGGATGLPGIPAGNFFGWDLALIENIYLFILVVTIVTTAFAWLI
HHHHEEEEEECCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRSFLGRAFLAIREDEVIARAHGINVPLTKVIGFGIGSGIAGLAGVLQVLLLGFVGPATF
HHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC
NVDQSILIVEVVLIGGMATTAGPLLGSLLVIGSTEYLRALADYRSMIFGALILIVLLWKP
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
GGLVQILGIGDTRSSSYKFPFSLFGRRRTAGETTPNTHARVEPIAEEVRP
CCEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MLGFLPRPVIRAAFVGLVVLAFLLPNLTQPYTIRVAATILVFTVFATGLNLILGFAGLLS
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGHAAMFGAGAYISARLLLDTGMPLLAVMVISVLGSAVFGLLVGLTSWRVGGDYLALITL
HHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
GVGQIFYLYLNNAKEVTGGATGLPGIPAGNFFGWDLALIENIYLFILVVTIVTTAFAWLI
HHHHEEEEEECCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRSFLGRAFLAIREDEVIARAHGINVPLTKVIGFGIGSGIAGLAGVLQVLLLGFVGPATF
HHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC
NVDQSILIVEVVLIGGMATTAGPLLGSLLVIGSTEYLRALADYRSMIFGALILIVLLWKP
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
GGLVQILGIGDTRSSSYKFPFSLFGRRRTAGETTPNTHARVEPIAEEVRP
CCEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]

Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2120183; 10984043 [H]