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The map label for this gene is 119716060

Identifier: 119716060

GI number: 119716060

Start: 1947061

End: 1947762

Strand: Reverse

Name: 119716060

Synonym: Noca_1826

Alternate gene names: NA

Gene position: 1947762-1947061 (Counterclockwise)

Preceding gene: 119716061

Following gene: 119716059

Centisome position: 39.07

GC content: 68.09

Gene sequence:

>702_bases
GTGTCCAGGGCCGGTGCGGATCTGGCGTTGCTGCAGAAGCTGATGGCGAACGCAGGCCGGGACATGTTCGCGGGGATGTT
CGACGAGCCGATGCCGGAGGTGCGGGTGGCGCCGGAGCGTTCGCGGGGCTTCCGGGTGCGGGTCGATCTGATGTACGCCA
AGCCGCCGATCTGGCGTCGTCTCGACCTGCCCGGCGATCTGATGCTCGACGAGCTGCATGTCGTGCTGCAGGTCGCGATG
GGCTGGGAGGACGGCCACCTGCACAAGTTCGGAGTCGGGGTGGACCGGCGTACCCGCGCCTACTTCGTCGCCGGGTTCGA
CCTCAGCGAAGGCGACGAAGGCGTCGCCGAAGACGAGGTACGGCTCGACCAGGTGGTGTCTGCCAAGGGCGACCGGCTCT
TTTATGACTACGACTTCGGCGACGGATGGGAGCACGTGCTGGTGGTCGAAGAGGTTCTCGACGACCTGCCACCGGCTCCG
GTCTGCCTGAAGGGCAAGATGGCCTGCCCGCCGGAGGACTGCGGCGGCCCGGGCGGCTACGAGGAGCTCGCCGATTGGGT
TCGTGGCGGCTACGACCCGCGGGCGACGCCCATGGGGCTCGGTGCCGAGGAGATGCGGGACTGGTTGCCCCAGGACTGGC
ATCCAGACCGGTTCTCAGTGGACGAGACCAACGACGCTCTGGCCGCTCTGGCTGCGGGTTGA

Upstream 100 bases:

>100_bases
GTGTAGGGACTGGGGTCTGAACCCGCTGGTCTGGGGCAGCGATCGAACGGTCTGGTTGGCTGGGGGCGTGCCGAAGAAGA
AGCGGAAGAGAAAGAGCGGC

Downstream 100 bases:

>100_bases
GGGCGCTTCACCGCTGAGGGTGTAGGAGTTGGGGTCTGAACCCCCTGGTCGGTGGCCGTGACCTGGATGCCGCCGGGCTC
CGGGCCTGCCGAGATGACGA

Product: plasmid pRiA4b ORF-3 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MSRAGADLALLQKLMANAGRDMFAGMFDEPMPEVRVAPERSRGFRVRVDLMYAKPPIWRRLDLPGDLMLDELHVVLQVAM
GWEDGHLHKFGVGVDRRTRAYFVAGFDLSEGDEGVAEDEVRLDQVVSAKGDRLFYDYDFGDGWEHVLVVEEVLDDLPPAP
VCLKGKMACPPEDCGGPGGYEELADWVRGGYDPRATPMGLGAEEMRDWLPQDWHPDRFSVDETNDALAALAAG

Sequences:

>Translated_233_residues
MSRAGADLALLQKLMANAGRDMFAGMFDEPMPEVRVAPERSRGFRVRVDLMYAKPPIWRRLDLPGDLMLDELHVVLQVAM
GWEDGHLHKFGVGVDRRTRAYFVAGFDLSEGDEGVAEDEVRLDQVVSAKGDRLFYDYDFGDGWEHVLVVEEVLDDLPPAP
VCLKGKMACPPEDCGGPGGYEELADWVRGGYDPRATPMGLGAEEMRDWLPQDWHPDRFSVDETNDALAALAAG
>Mature_232_residues
SRAGADLALLQKLMANAGRDMFAGMFDEPMPEVRVAPERSRGFRVRVDLMYAKPPIWRRLDLPGDLMLDELHVVLQVAMG
WEDGHLHKFGVGVDRRTRAYFVAGFDLSEGDEGVAEDEVRLDQVVSAKGDRLFYDYDFGDGWEHVLVVEEVLDDLPPAPV
CLKGKMACPPEDCGGPGGYEELADWVRGGYDPRATPMGLGAEEMRDWLPQDWHPDRFSVDETNDALAALAAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.rhizogenes plasmid pRia4B ORF-3 in virA region [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012912 [H]

Pfam domain/function: PF07929 PRiA4_ORF3 [H]

EC number: NA

Molecular weight: Translated: 25895; Mature: 25763

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRAGADLALLQKLMANAGRDMFAGMFDEPMPEVRVAPERSRGFRVRVDLMYAKPPIWRR
CCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEECCCCCCCEEEEEEEEECCCCCCEE
LDLPGDLMLDELHVVLQVAMGWEDGHLHKFGVGVDRRTRAYFVAGFDLSEGDEGVAEDEV
CCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCCHHHH
RLDQVVSAKGDRLFYDYDFGDGWEHVLVVEEVLDDLPPAPVCLKGKMACPPEDCGGPGGY
HHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCH
EELADWVRGGYDPRATPMGLGAEEMRDWLPQDWHPDRFSVDETNDALAALAAG
HHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCC
>Mature Secondary Structure 
SRAGADLALLQKLMANAGRDMFAGMFDEPMPEVRVAPERSRGFRVRVDLMYAKPPIWRR
CCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEECCCCCCCEEEEEEEEECCCCCCEE
LDLPGDLMLDELHVVLQVAMGWEDGHLHKFGVGVDRRTRAYFVAGFDLSEGDEGVAEDEV
CCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCCHHHH
RLDQVVSAKGDRLFYDYDFGDGWEHVLVVEEVLDDLPPAPVCLKGKMACPPEDCGGPGGY
HHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCH
EELADWVRGGYDPRATPMGLGAEEMRDWLPQDWHPDRFSVDETNDALAALAAG
HHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]