| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716025
Identifier: 119716025
GI number: 119716025
Start: 1903376
End: 1903918
Strand: Reverse
Name: 119716025
Synonym: Noca_1791
Alternate gene names: NA
Gene position: 1903918-1903376 (Counterclockwise)
Preceding gene: 119716027
Following gene: 119716022
Centisome position: 38.19
GC content: 71.27
Gene sequence:
>543_bases GTGCCGTTCACCCATGACACCGAGGCGTCCCTCCAGGCGGCGGCGATCCTGGCGAACTCGAGGCTGGAGCCGGACACGTT GACCAGGGTCGAGGACCTGGACGCGTTCTACGCCGAGTTCGAGTACACCGGCCGGCACGACCGCGACCGCGCCGAGCTGG ACGCGGTCCGAGCGATCCGGCCGGCGCTCTACGACCTGCTCACCGCCGATCGCGACCACGCGGTCGAGATGGTGAACGCG ATGCTCGCCGAGGCCGCCGCGGTGCCCCAGCTGGTGCGCCACGACGTCTGGGACTGGCACCTGCACGCGGTCGCACCCGA GCAGGACCTGCCGACCCGGATCCTGGTCGAGACCGCGATGGCGATGATCGACGTGATCCGCGCGGACGAGATGTCGCGCC TCGGGGTGTGCGCCGACGACTCCTGCGACGGCGTGGTCCTCGACCTCTCCCGCAACCGCTCGAAGCGCTTCTGCTCCACC GCCTGCGGCAACCGCAACGCCGTGGCCGCCTACCGCGCCCGCCGGTCGAGTCGGGAGTTCTGA
Upstream 100 bases:
>100_bases GGGAGCCGCCCGTGGCGGGCACCAGCCGATCGGATGCCTCGTCATGGGCCAACGTCGCCATGACACATGACGCTAGTGCC ACGTCGTGTAACCTGTCAAC
Downstream 100 bases:
>100_bases CGGTCGGTTCTGACGCATGAACCGACGGAAGTCCCGACTCGACGGGGTCAGGCCTGGGCGAGGAAGCGGCGCAGCACCTC GATGAAGACCTCCGGCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MPFTHDTEASLQAAAILANSRLEPDTLTRVEDLDAFYAEFEYTGRHDRDRAELDAVRAIRPALYDLLTADRDHAVEMVNA MLAEAAAVPQLVRHDVWDWHLHAVAPEQDLPTRILVETAMAMIDVIRADEMSRLGVCADDSCDGVVLDLSRNRSKRFCST ACGNRNAVAAYRARRSSREF
Sequences:
>Translated_180_residues MPFTHDTEASLQAAAILANSRLEPDTLTRVEDLDAFYAEFEYTGRHDRDRAELDAVRAIRPALYDLLTADRDHAVEMVNA MLAEAAAVPQLVRHDVWDWHLHAVAPEQDLPTRILVETAMAMIDVIRADEMSRLGVCADDSCDGVVLDLSRNRSKRFCST ACGNRNAVAAYRARRSSREF >Mature_179_residues PFTHDTEASLQAAAILANSRLEPDTLTRVEDLDAFYAEFEYTGRHDRDRAELDAVRAIRPALYDLLTADRDHAVEMVNAM LAEAAAVPQLVRHDVWDWHLHAVAPEQDLPTRILVETAMAMIDVIRADEMSRLGVCADDSCDGVVLDLSRNRSKRFCSTA CGNRNAVAAYRARRSSREF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20188; Mature: 20057
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFTHDTEASLQAAAILANSRLEPDTLTRVEDLDAFYAEFEYTGRHDRDRAELDAVRAIR CCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH PALYDLLTADRDHAVEMVNAMLAEAAAVPQLVRHDVWDWHLHAVAPEQDLPTRILVETAM HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCHHHHHHHHH AMIDVIRADEMSRLGVCADDSCDGVVLDLSRNRSKRFCSTACGNRNAVAAYRARRSSREF HHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure PFTHDTEASLQAAAILANSRLEPDTLTRVEDLDAFYAEFEYTGRHDRDRAELDAVRAIR CCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH PALYDLLTADRDHAVEMVNAMLAEAAAVPQLVRHDVWDWHLHAVAPEQDLPTRILVETAM HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCHHHHHHHHH AMIDVIRADEMSRLGVCADDSCDGVVLDLSRNRSKRFCSTACGNRNAVAAYRARRSSREF HHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA