| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is apr [H]
Identifier: 119716022
GI number: 119716022
Start: 1899776
End: 1901683
Strand: Reverse
Name: apr [H]
Synonym: Noca_1788
Alternate gene names: 119716022
Gene position: 1901683-1899776 (Counterclockwise)
Preceding gene: 119716025
Following gene: 119716017
Centisome position: 38.14
GC content: 74.58
Gene sequence:
>1908_bases ATGCCATCCTCGCGCACCCGGCTGCTCGCGCTCACCAGCGCCCTCGCGGCCGTCCTCTCCCTCACCGGCGTCGCCTCCGC GGCGGCGCCGGCGGCACCTGCGGCCGCCACGGTCGGCTCCGACCTCCAGGGCGCGCACCGCGGCCTGGACCGCCTGCTCG CCGACGGTACGCCGAACCACCGGGCGATCGTCACGTTCGCCGCCGTGCCGACCAGCACCCAGATCGGCGCGCTGCAGGCC CTCGGCCTCGTCGTGCAGCCGATGTCCCACCTGCCGCTCGCCCTCGTCGAGGGCCCGGTGCCCGCGATGGTGCAGGCGGT CACGGCCGGCATCGGCCTCGACGTCTACCCCGACGAGCGGCTCCAGCTCCTCGACACCCCGTCGACCAACGCGATGTCGT CGAGCCCGGCGGCGGCCCAGGCCCTGCGCACCCGCGGCTTCACCGGCAAGGGCGTGACCGTCGGCGTCGTCGACTCCGGC TGCGACGCGACGCACTCCGACCTCGCCGACCACGTCGTGCACAACGTGAGCCTGCTCAGCCCCGAGTACGCCAACGCCGG CACCGACCCGGCGATCGTCGTACCCGTCGACCAGGGCCCGGTGAGCAACACCGACCTCGGCAGCGGCCACGGGACGCACG TCGCGGGCATCATCGCCGCCGACTCCTCCTCGGCCGAGGACGGCAGTCGGTACGGCGTCGCCCCGGACGCCGACCTCGCC TGCTTCGCGATCGGCGCAGTGCTGTTCACGACCGCGGTCGTCACCGCCTACGACTACATGCTCGACCAGCCGGACCTGCT CGGCATCGACGTCGTCAACAACTCCTGGGGCAACAGCTACCGCCAGTTCGACCCCGCCGACCCGGTCGCCGTCGCCACCA AGGCCGTGGCCGACCGTGGCGTGACCGTGGTGTTCGCCGCCGGCAACTCCGGCAGCGGCGACGTCCCGATGAGCCTGAAC CCGTTCTCCCAGTCGCCCTGGGTGATCTCCGTGGCGGCCGGCACCCTGGACCGGCACCGCGGCGACTTCTCCTCCAACGG CCTGGTCCACGACAACTCGCAACCCACGGCCATCGGCACCGAGGGACACACCACCTACACCGGCGACCGGATCGGGCTGG TGCACCCGGACCTCACCGCCCCCGGCGTCGACATCGGCTCGACCTGCGACAGCGCCGGCACCCTGATCGGGCCGTGCGGA CCGGACGAGAACGCCTCGGCCTCGGGCACCTCGATGGCCTCGCCGCACATCGCCGGCGCGGCCGCGGTGCTGCTGCAGGC CCAGCCCCGGCTCAGCCCGGAGCAGGTGCGGCTCGCCCTGCAGGCGACGGCGACGCCGGTCCAGGCGACGGGCGGCCCGG CCGCGCTGCCGTTCTGGGAGGTCGGGTACGGCTACGCCAACCTCGACCGCGCGGTCCAGCTGGTGCGCTCCGACGGCTGG CAGGGGCGGCTGCGTGCCGCCGCCCACCGGGCGGACCGCCGGGTGCTCGCCGCGGACGGCACCGCGGTCGTCCGATCCGA CTTCTTCGTCCACGAGGCGCCCCCGGCGACCGCGGGCGGCAGTGACAGCGCGTCGTACGACGTGCCCGTGTCCGCGCGCA CCCGCGGGCTCGCCGTGAGCCTGGCGTTCCCGTCCGGCGGCAGCGTCGGCGCCAGCCTGTTCAGCTACACCGTGCAGGTC CTCGACCCCAGCGGGAAGGTGATCGCGACGACCACTTCGGACCCGGTCGCGGGCTCGGGCACCGCGCTGGCGACGGTCCG GCTGCCCCAGGGCGCGGAGGCCGGGACGTACACGTTCGAGGTCACCGGCGACTACGCCGCCTCCGACCCGGACACCGTCG ACAGCGACTCGCTGCTGGGCCGGTTCGTCACCCTGCACGTGGCCCAGCTGCGGAGCAGCCGGCGCTAG
Upstream 100 bases:
>100_bases AGCAGGTCGACCAGAAGCAGCGCGACCAGAAGCCGGGCGACGACGTAACCCGCCGCGCGGTTGCGGCGTTGTCCGGGCAC CTCACGAGATCGGATCATCC
Downstream 100 bases:
>100_bases GAGAGGGCCCCTCGAGACGGCAGGGCCCTCAAGTGCCGCGTCCCACAAGTTCTTGGGCGCTTCGCGCCCACATGGCACGC GCCTCGCTGCGTTGCCGACG
Product: peptidase S8/S53 subtilisin kexin sedolisin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 635; Mature: 634
Protein sequence:
>635_residues MPSSRTRLLALTSALAAVLSLTGVASAAAPAAPAAATVGSDLQGAHRGLDRLLADGTPNHRAIVTFAAVPTSTQIGALQA LGLVVQPMSHLPLALVEGPVPAMVQAVTAGIGLDVYPDERLQLLDTPSTNAMSSSPAAAQALRTRGFTGKGVTVGVVDSG CDATHSDLADHVVHNVSLLSPEYANAGTDPAIVVPVDQGPVSNTDLGSGHGTHVAGIIAADSSSAEDGSRYGVAPDADLA CFAIGAVLFTTAVVTAYDYMLDQPDLLGIDVVNNSWGNSYRQFDPADPVAVATKAVADRGVTVVFAAGNSGSGDVPMSLN PFSQSPWVISVAAGTLDRHRGDFSSNGLVHDNSQPTAIGTEGHTTYTGDRIGLVHPDLTAPGVDIGSTCDSAGTLIGPCG PDENASASGTSMASPHIAGAAAVLLQAQPRLSPEQVRLALQATATPVQATGGPAALPFWEVGYGYANLDRAVQLVRSDGW QGRLRAAAHRADRRVLAADGTAVVRSDFFVHEAPPATAGGSDSASYDVPVSARTRGLAVSLAFPSGGSVGASLFSYTVQV LDPSGKVIATTTSDPVAGSGTALATVRLPQGAEAGTYTFEVTGDYAASDPDTVDSDSLLGRFVTLHVAQLRSSRR
Sequences:
>Translated_635_residues MPSSRTRLLALTSALAAVLSLTGVASAAAPAAPAAATVGSDLQGAHRGLDRLLADGTPNHRAIVTFAAVPTSTQIGALQA LGLVVQPMSHLPLALVEGPVPAMVQAVTAGIGLDVYPDERLQLLDTPSTNAMSSSPAAAQALRTRGFTGKGVTVGVVDSG CDATHSDLADHVVHNVSLLSPEYANAGTDPAIVVPVDQGPVSNTDLGSGHGTHVAGIIAADSSSAEDGSRYGVAPDADLA CFAIGAVLFTTAVVTAYDYMLDQPDLLGIDVVNNSWGNSYRQFDPADPVAVATKAVADRGVTVVFAAGNSGSGDVPMSLN PFSQSPWVISVAAGTLDRHRGDFSSNGLVHDNSQPTAIGTEGHTTYTGDRIGLVHPDLTAPGVDIGSTCDSAGTLIGPCG PDENASASGTSMASPHIAGAAAVLLQAQPRLSPEQVRLALQATATPVQATGGPAALPFWEVGYGYANLDRAVQLVRSDGW QGRLRAAAHRADRRVLAADGTAVVRSDFFVHEAPPATAGGSDSASYDVPVSARTRGLAVSLAFPSGGSVGASLFSYTVQV LDPSGKVIATTTSDPVAGSGTALATVRLPQGAEAGTYTFEVTGDYAASDPDTVDSDSLLGRFVTLHVAQLRSSRR >Mature_634_residues PSSRTRLLALTSALAAVLSLTGVASAAAPAAPAAATVGSDLQGAHRGLDRLLADGTPNHRAIVTFAAVPTSTQIGALQAL GLVVQPMSHLPLALVEGPVPAMVQAVTAGIGLDVYPDERLQLLDTPSTNAMSSSPAAAQALRTRGFTGKGVTVGVVDSGC DATHSDLADHVVHNVSLLSPEYANAGTDPAIVVPVDQGPVSNTDLGSGHGTHVAGIIAADSSSAEDGSRYGVAPDADLAC FAIGAVLFTTAVVTAYDYMLDQPDLLGIDVVNNSWGNSYRQFDPADPVAVATKAVADRGVTVVFAAGNSGSGDVPMSLNP FSQSPWVISVAAGTLDRHRGDFSSNGLVHDNSQPTAIGTEGHTTYTGDRIGLVHPDLTAPGVDIGSTCDSAGTLIGPCGP DENASASGTSMASPHIAGAAAVLLQAQPRLSPEQVRLALQATATPVQATGGPAALPFWEVGYGYANLDRAVQLVRSDGWQ GRLRAAAHRADRRVLAADGTAVVRSDFFVHEAPPATAGGSDSASYDVPVSARTRGLAVSLAFPSGGSVGASLFSYTVQVL DPSGKVIATTTSDPVAGSGTALATVRLPQGAEAGTYTFEVTGDYAASDPDTVDSDSLLGRFVTLHVAQLRSSRR
Specific function: Subtilisin is an extracellular alkaline serine protease, it catalyzes the hydrolysis of proteins and peptide amides [H]
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 [H]
Pfam domain/function: PF00082 Peptidase_S8 [H]
EC number: =3.4.21.62 [H]
Molecular weight: Translated: 64385; Mature: 64254
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS00136 SUBTILASE_ASP ; PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSRTRLLALTSALAAVLSLTGVASAAAPAAPAAATVGSDLQGAHRGLDRLLADGTPNH CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCC RAIVTFAAVPTSTQIGALQALGLVVQPMSHLPLALVEGPVPAMVQAVTAGIGLDVYPDER EEEEEEEECCCCCCHHHHHHHHHHHCCHHHCCEEEECCCHHHHHHHHHHCCCCCCCCCCC LQLLDTPSTNAMSSSPAAAQALRTRGFTGKGVTVGVVDSGCDATHSDLADHVVHNVSLLS EEEEECCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCC PEYANAGTDPAIVVPVDQGPVSNTDLGSGHGTHVAGIIAADSSSAEDGSRYGVAPDADLA CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHH CFAIGAVLFTTAVVTAYDYMLDQPDLLGIDVVNNSWGNSYRQFDPADPVAVATKAVADRG HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCC VTVVFAAGNSGSGDVPMSLNPFSQSPWVISVAAGTLDRHRGDFSSNGLVHDNSQPTAIGT EEEEEECCCCCCCCCCEEECCCCCCCEEEEEECCCHHHHCCCCCCCCEEECCCCCCEECC EGHTTYTGDRIGLVHPDLTAPGVDIGSTCDSAGTLIGPCGPDENASASGTSMASPHIAGA CCCEEECCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHH AAVLLQAQPRLSPEQVRLALQATATPVQATGGPAALPFWEVGYGYANLDRAVQLVRSDGW HEEEEECCCCCCHHHEEEEEEECCCCEECCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCC QGRLRAAAHRADRRVLAADGTAVVRSDFFVHEAPPATAGGSDSASYDVPVSARTRGLAVS CHHHHHHHHHCCCEEEEECCCEEEECCEEEECCCCCCCCCCCCCCEECCCCCCCCCEEEE LAFPSGGSVGASLFSYTVQVLDPSGKVIATTTSDPVAGSGTALATVRLPQGAEAGTYTFE EECCCCCCHHHHHHHEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEE VTGDYAASDPDTVDSDSLLGRFVTLHVAQLRSSRR EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PSSRTRLLALTSALAAVLSLTGVASAAAPAAPAAATVGSDLQGAHRGLDRLLADGTPNH CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCC RAIVTFAAVPTSTQIGALQALGLVVQPMSHLPLALVEGPVPAMVQAVTAGIGLDVYPDER EEEEEEEECCCCCCHHHHHHHHHHHCCHHHCCEEEECCCHHHHHHHHHHCCCCCCCCCCC LQLLDTPSTNAMSSSPAAAQALRTRGFTGKGVTVGVVDSGCDATHSDLADHVVHNVSLLS EEEEECCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCC PEYANAGTDPAIVVPVDQGPVSNTDLGSGHGTHVAGIIAADSSSAEDGSRYGVAPDADLA CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHH CFAIGAVLFTTAVVTAYDYMLDQPDLLGIDVVNNSWGNSYRQFDPADPVAVATKAVADRG HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCC VTVVFAAGNSGSGDVPMSLNPFSQSPWVISVAAGTLDRHRGDFSSNGLVHDNSQPTAIGT EEEEEECCCCCCCCCCEEECCCCCCCEEEEEECCCHHHHCCCCCCCCEEECCCCCCEECC EGHTTYTGDRIGLVHPDLTAPGVDIGSTCDSAGTLIGPCGPDENASASGTSMASPHIAGA CCCEEECCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHH AAVLLQAQPRLSPEQVRLALQATATPVQATGGPAALPFWEVGYGYANLDRAVQLVRSDGW HEEEEECCCCCCHHHEEEEEEECCCCEECCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCC QGRLRAAAHRADRRVLAADGTAVVRSDFFVHEAPPATAGGSDSASYDVPVSARTRGLAVS CHHHHHHHHHCCCEEEEECCCEEEECCEEEECCCCCCCCCCCCCCEECCCCCCCCCEEEE LAFPSGGSVGASLFSYTVQVLDPSGKVIATTTSDPVAGSGTALATVRLPQGAEAGTYTFE EECCCCCCHHHHHHHEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEE VTGDYAASDPDTVDSDSLLGRFVTLHVAQLRSSRR EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6420308; 9826175 [H]