| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is pleC [H]
Identifier: 119715984
GI number: 119715984
Start: 1860168
End: 1861976
Strand: Direct
Name: pleC [H]
Synonym: Noca_1749
Alternate gene names: 119715984
Gene position: 1860168-1861976 (Clockwise)
Preceding gene: 119715983
Following gene: 119715985
Centisome position: 37.31
GC content: 73.36
Gene sequence:
>1809_bases GTGTGTGCGGGGAGTCCGTGCGTGGGGAGTCCGTGCGTGGACACTGTGGGAGTCGGCGCGTCCGTGGGGGACGCGCGAGG GGTGTGGTCGAGCCATGAGCGAGCGCAGCGAGCGAGTACGCGCATGAGTGCGGGCCGTCCGGTCGCGCGGTTGGTCCAGC CGGTGATCGTGCGCGTGACCGCGATGGCCGCGTTGATGGCTCTGATCGCGGTCCTCGGCGTCGTGCTGTCGACGGCGGCG GTCAACCACCTCACCGACGACCTGCAGCCGGCGGCCGCCGCCAACCAGGACGTCTACCAGGACCTCACCGACATGTCCGC CGCCGTGGAGTCGTGGTCGGCCTCCGGCCAGCGGGCCGCGGCCGATCGGTTCACGCAGGCACTGGTGCGGTTCCCGGCCG ACCAGCAGAAGGTCCGCCGGTTCGCCGACGGCGACGACGAGCTGGAGATGCTGGTGACCCGCCAGGAGCGGGTCGCCCAG GCCTGGATCGAGCGGTTCGCTCAGCCCCGGATCGACGCCGAGGGCGGGACCCCTCCCGCGGCCGGGCAGGTGCGGTCCGG CGCCGCCGCGTTCGAGGCGGTCCGTAGCGCTCACCAGGACACCACCCAGGCCTTCGACAGCCGGGTGCGCCAGGCGCGCG CCGACGCGTCGCTCCGCCTCAAGGGGACCGTGCTTGCCGTGGTCCTCCTCGCCGGCGCGGCCTGGTACGTGATCTCCCGC TCCCGGCGCCGACTGATGACCGAGCTGTCCGAGCCGTTGCTGGCGCTGGAACAGGTGGTGCAGCGGATGGCCAAGCAGGA CCACGACGTACGAGCCAAGGAGCTGGGGCCCAAGGAGGTGCGTGCGGTCGCGTCGGCGCTGAACGCCTTCGCCGACGCCC AGGGCCGGGCCCGCGCCGTCGAGGGCCGGATCCAGAGCGAGCTGCGCAGCCTCGACACGGCGCGCGACGACTTCGTCTCC AACGTCTCCCACGAGCTGCGCACGCCGCTGACCACGATCAGCGGCTACCTCGAGCTCGTCGCCGAGGAGTTCGAGGGCCG GATGGATCCGCCGCACGAGCGGATGCTGGAGGCGACCCGGCGCAACGTGGCCCGCCTCAAGGCGCTGATCGACGACCTGC TCGCCCTCTCGCGCGCCGAGGGCCGCCGCAGCGACTTCGAGCCGGTCGACCTCGCACTGCTGGTCCGGGAGGCGGTGACC GACGTCCGCATCACCGCGGCCCGGCGCCGGATCCGCCTCGAGGTCGACACCCCCGAGGACGTCGTACCGGTGCTCGCCGA TCGGGCCATGCTGCACCGCGCGTTGCTCAACGTGCTCAGCAACGCGGTGAAGTTCAGCCACGACGACGGCACGGTCGACG TCGTGCTCACGGTCCTGGGCGGTCAGGTCGAGGTGCGGGTCACCGACCACGGCATCGGCATCCCGGGCGCCGAGATCGAG CGGCTCGGCACCCGGTTCTTCCGGGCGTCGAACGCGGTGACGAACGAGATCGCCGGCACCGGGCTGGGCCTGCGGATCAC CCAGACCATCATCGACCGCCACTCCGGCGAGGTCGTCATCGAGTCCGAGGAGGGCGAGGGCACCAGCGTCGTCGTCCGGC TCCGTCGGCACGGCGACGGCCTGCCGCCACTGCTGCCCCACGAGATCGTGGCGGAGGAGGAGGCGCGCGCCGCCGCGCTG CGGGCGCGCGGCGCCCGCGGTGCCGGTGTCGAGGTGGTCGACGCCGCCGACCCGGAACGCCCGGCGGGCGACACGGACGG AACGGACGCACCGCCGCGGATCGTGCCGGCCTTCCCCCGGCGACGCTGA
Upstream 100 bases:
>100_bases GGTGCAGGCACTGCTCACCCGTTCGGTCTGACCGAATCGGCACCGCGGGGAGCCCGGCGGCGATACGCTCCTCGGCAGGG GTGCGGGGGGCACTCTGACG
Downstream 100 bases:
>100_bases GCGGAGCCGCGCCAACGGTTCCGGTCCCGGCAGGGGAACAACGCGGATTACCGCGGCGTTGGGACCCGTGACACAATCGT GTGCTGGCTCCGGTTCACGG
Product: ATPase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 602; Mature: 602
Protein sequence:
>602_residues MCAGSPCVGSPCVDTVGVGASVGDARGVWSSHERAQRASTRMSAGRPVARLVQPVIVRVTAMAALMALIAVLGVVLSTAA VNHLTDDLQPAAAANQDVYQDLTDMSAAVESWSASGQRAAADRFTQALVRFPADQQKVRRFADGDDELEMLVTRQERVAQ AWIERFAQPRIDAEGGTPPAAGQVRSGAAAFEAVRSAHQDTTQAFDSRVRQARADASLRLKGTVLAVVLLAGAAWYVISR SRRRLMTELSEPLLALEQVVQRMAKQDHDVRAKELGPKEVRAVASALNAFADAQGRARAVEGRIQSELRSLDTARDDFVS NVSHELRTPLTTISGYLELVAEEFEGRMDPPHERMLEATRRNVARLKALIDDLLALSRAEGRRSDFEPVDLALLVREAVT DVRITAARRRIRLEVDTPEDVVPVLADRAMLHRALLNVLSNAVKFSHDDGTVDVVLTVLGGQVEVRVTDHGIGIPGAEIE RLGTRFFRASNAVTNEIAGTGLGLRITQTIIDRHSGEVVIESEEGEGTSVVVRLRRHGDGLPPLLPHEIVAEEEARAAAL RARGARGAGVEVVDAADPERPAGDTDGTDAPPRIVPAFPRRR
Sequences:
>Translated_602_residues MCAGSPCVGSPCVDTVGVGASVGDARGVWSSHERAQRASTRMSAGRPVARLVQPVIVRVTAMAALMALIAVLGVVLSTAA VNHLTDDLQPAAAANQDVYQDLTDMSAAVESWSASGQRAAADRFTQALVRFPADQQKVRRFADGDDELEMLVTRQERVAQ AWIERFAQPRIDAEGGTPPAAGQVRSGAAAFEAVRSAHQDTTQAFDSRVRQARADASLRLKGTVLAVVLLAGAAWYVISR SRRRLMTELSEPLLALEQVVQRMAKQDHDVRAKELGPKEVRAVASALNAFADAQGRARAVEGRIQSELRSLDTARDDFVS NVSHELRTPLTTISGYLELVAEEFEGRMDPPHERMLEATRRNVARLKALIDDLLALSRAEGRRSDFEPVDLALLVREAVT DVRITAARRRIRLEVDTPEDVVPVLADRAMLHRALLNVLSNAVKFSHDDGTVDVVLTVLGGQVEVRVTDHGIGIPGAEIE RLGTRFFRASNAVTNEIAGTGLGLRITQTIIDRHSGEVVIESEEGEGTSVVVRLRRHGDGLPPLLPHEIVAEEEARAAAL RARGARGAGVEVVDAADPERPAGDTDGTDAPPRIVPAFPRRR >Mature_602_residues MCAGSPCVGSPCVDTVGVGASVGDARGVWSSHERAQRASTRMSAGRPVARLVQPVIVRVTAMAALMALIAVLGVVLSTAA VNHLTDDLQPAAAANQDVYQDLTDMSAAVESWSASGQRAAADRFTQALVRFPADQQKVRRFADGDDELEMLVTRQERVAQ AWIERFAQPRIDAEGGTPPAAGQVRSGAAAFEAVRSAHQDTTQAFDSRVRQARADASLRLKGTVLAVVLLAGAAWYVISR SRRRLMTELSEPLLALEQVVQRMAKQDHDVRAKELGPKEVRAVASALNAFADAQGRARAVEGRIQSELRSLDTARDDFVS NVSHELRTPLTTISGYLELVAEEFEGRMDPPHERMLEATRRNVARLKALIDDLLALSRAEGRRSDFEPVDLALLVREAVT DVRITAARRRIRLEVDTPEDVVPVLADRAMLHRALLNVLSNAVKFSHDDGTVDVVLTVLGGQVEVRVTDHGIGIPGAEIE RLGTRFFRASNAVTNEIAGTGLGLRITQTIIDRHSGEVVIESEEGEGTSVVVRLRRHGDGLPPLLPHEIVAEEEARAAAL RARGARGAGVEVVDAADPERPAGDTDGTDAPPRIVPAFPRRR
Specific function: Member of the two-component regulatory system involved in the regulation of polar organelle development. PleC functions as a membrane-associated protein kinase that transfers phosphate to the response regulator pleD, leading to its activation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI145693157, Length=235, Percent_Identity=31.9148936170213, Blast_Score=111, Evalue=2e-25, Organism=Escherichia coli, GI1786600, Length=230, Percent_Identity=32.6086956521739, Blast_Score=110, Evalue=3e-25, Organism=Escherichia coli, GI1789149, Length=319, Percent_Identity=26.3322884012539, Blast_Score=102, Evalue=5e-23, Organism=Escherichia coli, GI1788549, Length=219, Percent_Identity=29.2237442922374, Blast_Score=99, Evalue=1e-21, Organism=Escherichia coli, GI87082128, Length=278, Percent_Identity=27.6978417266187, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI1790861, Length=317, Percent_Identity=29.9684542586751, Blast_Score=96, Evalue=8e-21, Organism=Escherichia coli, GI1788393, Length=245, Percent_Identity=28.1632653061224, Blast_Score=94, Evalue=3e-20, Organism=Escherichia coli, GI1790346, Length=262, Percent_Identity=28.2442748091603, Blast_Score=91, Evalue=3e-19, Organism=Escherichia coli, GI48994928, Length=246, Percent_Identity=25.609756097561, Blast_Score=90, Evalue=4e-19, Organism=Escherichia coli, GI1790436, Length=234, Percent_Identity=27.7777777777778, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1788713, Length=234, Percent_Identity=29.0598290598291, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1786912, Length=207, Percent_Identity=27.0531400966184, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1789808, Length=309, Percent_Identity=27.831715210356, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI1786783, Length=286, Percent_Identity=25.5244755244755, Blast_Score=75, Evalue=9e-15, Organism=Escherichia coli, GI87081816, Length=352, Percent_Identity=26.4204545454545, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1787894, Length=234, Percent_Identity=25.2136752136752, Blast_Score=66, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 64986; Mature: 64986
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN ; PS00116 DNA_POLYMERASE_B
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCAGSPCVGSPCVDTVGVGASVGDARGVWSSHERAQRASTRMSAGRPVARLVQPVIVRVT CCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH AMAALMALIAVLGVVLSTAAVNHLTDDLQPAAAANQDVYQDLTDMSAAVESWSASGQRAA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHH ADRFTQALVRFPADQQKVRRFADGDDELEMLVTRQERVAQAWIERFAQPRIDAEGGTPPA HHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC AGQVRSGAAAFEAVRSAHQDTTQAFDSRVRQARADASLRLKGTVLAVVLLAGAAWYVISR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHH SRRRLMTELSEPLLALEQVVQRMAKQDHDVRAKELGPKEVRAVASALNAFADAQGRARAV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCHHHHH EGRIQSELRSLDTARDDFVSNVSHELRTPLTTISGYLELVAEEFEGRMDPPHERMLEATR HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH RNVARLKALIDDLLALSRAEGRRSDFEPVDLALLVREAVTDVRITAARRRIRLEVDTPED HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCHH VVPVLADRAMLHRALLNVLSNAVKFSHDDGTVDVVLTVLGGQVEVRVTDHGIGIPGAEIE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEECCCEEEEEEECCCCCCCCHHHH RLGTRFFRASNAVTNEIAGTGLGLRITQTIIDRHSGEVVIESEEGEGTSVVVRLRRHGDG HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEECCCCCCCHHEEEEHHCCCC LPPLLPHEIVAEEEARAAALRARGARGAGVEVVDAADPERPAGDTDGTDAPPRIVPAFPR CCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC RR CC >Mature Secondary Structure MCAGSPCVGSPCVDTVGVGASVGDARGVWSSHERAQRASTRMSAGRPVARLVQPVIVRVT CCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH AMAALMALIAVLGVVLSTAAVNHLTDDLQPAAAANQDVYQDLTDMSAAVESWSASGQRAA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHH ADRFTQALVRFPADQQKVRRFADGDDELEMLVTRQERVAQAWIERFAQPRIDAEGGTPPA HHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC AGQVRSGAAAFEAVRSAHQDTTQAFDSRVRQARADASLRLKGTVLAVVLLAGAAWYVISR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHH SRRRLMTELSEPLLALEQVVQRMAKQDHDVRAKELGPKEVRAVASALNAFADAQGRARAV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCHHHHH EGRIQSELRSLDTARDDFVSNVSHELRTPLTTISGYLELVAEEFEGRMDPPHERMLEATR HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH RNVARLKALIDDLLALSRAEGRRSDFEPVDLALLVREAVTDVRITAARRRIRLEVDTPED HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCHH VVPVLADRAMLHRALLNVLSNAVKFSHDDGTVDVVLTVLGGQVEVRVTDHGIGIPGAEIE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEECCCEEEEEEECCCCCCCCHHHH RLGTRFFRASNAVTNEIAGTGLGLRITQTIIDRHSGEVVIESEEGEGTSVVVRLRRHGDG HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEECCCCCCCHHEEEEHHCCCC LPPLLPHEIVAEEEARAAALRARGARGAGVEVVDAADPERPAGDTDGTDAPPRIVPAFPR CCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC RR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8421698; 11259647 [H]