| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is phoP [H]
Identifier: 119715983
GI number: 119715983
Start: 1859727
End: 1860098
Strand: Direct
Name: phoP [H]
Synonym: Noca_1748
Alternate gene names: 119715983
Gene position: 1859727-1860098 (Clockwise)
Preceding gene: 119715982
Following gene: 119715984
Centisome position: 37.3
GC content: 70.16
Gene sequence:
>372_bases GTGGCTCGGATTCTGGTCGCGGACGACGACGTCGACATCCGTGAGCTCGTCGAGTTCAAGCTGTCGACGCTCGGCCACGA CGTGGTCGCGGTGTCGGATGGGGCGGCGGCGATCGAGGCGTGTCAGGCCCAGCGCCCCGACCTCGCGGTCCTCGACGTGA TGATGCCCGGTGTCTCCGGACTCGACGCGATCCGGGCGATCCGCGCGGACCCGGCGCTCGCCGACCTGCCGGTGATCCTG CTGACCGCTCGGGCCCAGGAGTCCGACGTGGAGACCGGCTTCGACTCGGGCGCCGATGACTACATCACCAAGCCCTTCAG CCCCCGCGAGCTCGCCTCGCGGGTGCAGGCACTGCTCACCCGTTCGGTCTGA
Upstream 100 bases:
>100_bases CTGAGAACAGCCGGCACGCGTGCCAACGCCGTCTTACGCTTTCGCTGGACGCGATGCCGGATAGGCTGCGCACGCACATG CCCGAGGGAAGGGGACCTGA
Downstream 100 bases:
>100_bases CCGAATCGGCACCGCGGGGAGCCCGGCGGCGATACGCTCCTCGGCAGGGGTGCGGGGGGCACTCTGACGGTGTGTGCGGG GAGTCCGTGCGTGGGGAGTC
Product: response regulator receiver
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MARILVADDDVDIRELVEFKLSTLGHDVVAVSDGAAAIEACQAQRPDLAVLDVMMPGVSGLDAIRAIRADPALADLPVIL LTARAQESDVETGFDSGADDYITKPFSPRELASRVQALLTRSV
Sequences:
>Translated_123_residues MARILVADDDVDIRELVEFKLSTLGHDVVAVSDGAAAIEACQAQRPDLAVLDVMMPGVSGLDAIRAIRADPALADLPVIL LTARAQESDVETGFDSGADDYITKPFSPRELASRVQALLTRSV >Mature_122_residues ARILVADDDVDIRELVEFKLSTLGHDVVAVSDGAAAIEACQAQRPDLAVLDVMMPGVSGLDAIRAIRADPALADLPVILL TARAQESDVETGFDSGADDYITKPFSPRELASRVQALLTRSV
Specific function: Member of the two-component regulatory system phoP/phoR involved in the regulation of alkaline phosphatase genes phoA and phoB and of phosphodiesterase [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786599, Length=119, Percent_Identity=44.5378151260504, Blast_Score=110, Evalue=2e-26, Organism=Escherichia coli, GI1789809, Length=120, Percent_Identity=40, Blast_Score=89, Evalue=7e-20, Organism=Escherichia coli, GI1788394, Length=120, Percent_Identity=36.6666666666667, Blast_Score=86, Evalue=1e-18, Organism=Escherichia coli, GI1790860, Length=119, Percent_Identity=38.655462184874, Blast_Score=84, Evalue=4e-18, Organism=Escherichia coli, GI2367329, Length=122, Percent_Identity=41.8032786885246, Blast_Score=81, Evalue=2e-17, Organism=Escherichia coli, GI1790863, Length=121, Percent_Identity=35.5371900826446, Blast_Score=81, Evalue=2e-17, Organism=Escherichia coli, GI1787375, Length=120, Percent_Identity=35, Blast_Score=77, Evalue=3e-16, Organism=Escherichia coli, GI87082012, Length=117, Percent_Identity=39.3162393162393, Blast_Score=75, Evalue=2e-15, Organism=Escherichia coli, GI1788191, Length=120, Percent_Identity=31.6666666666667, Blast_Score=72, Evalue=8e-15, Organism=Escherichia coli, GI1786911, Length=122, Percent_Identity=34.4262295081967, Blast_Score=72, Evalue=1e-14, Organism=Escherichia coli, GI1789402, Length=120, Percent_Identity=35.8333333333333, Blast_Score=71, Evalue=2e-14, Organism=Escherichia coli, GI1786784, Length=120, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=7e-14, Organism=Escherichia coli, GI1787229, Length=118, Percent_Identity=34.7457627118644, Blast_Score=69, Evalue=1e-13, Organism=Escherichia coli, GI1790552, Length=120, Percent_Identity=35.8333333333333, Blast_Score=69, Evalue=1e-13, Organism=Escherichia coli, GI1790299, Length=103, Percent_Identity=33.9805825242718, Blast_Score=65, Evalue=1e-12, Organism=Escherichia coli, GI1788550, Length=117, Percent_Identity=30.7692307692308, Blast_Score=62, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR016032 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 13075; Mature: 12944
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARILVADDDVDIRELVEFKLSTLGHDVVAVSDGAAAIEACQAQRPDLAVLDVMMPGVSG CCEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCCHHHHHHHHCCCCC LDAIRAIRADPALADLPVILLTARAQESDVETGFDSGADDYITKPFSPRELASRVQALLT HHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH RSV CCC >Mature Secondary Structure ARILVADDDVDIRELVEFKLSTLGHDVVAVSDGAAAIEACQAQRPDLAVLDVMMPGVSG CEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCCHHHHHHHHCCCCC LDAIRAIRADPALADLPVILLTARAQESDVETGFDSGADDYITKPFSPRELASRVQALLT HHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH RSV CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1454550; 3036763; 9387221; 9384377; 8045898; 3142862 [H]