| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715930
Identifier: 119715930
GI number: 119715930
Start: 1801689
End: 1802729
Strand: Direct
Name: 119715930
Synonym: Noca_1695
Alternate gene names: NA
Gene position: 1801689-1802729 (Clockwise)
Preceding gene: 119715928
Following gene: 119715933
Centisome position: 36.14
GC content: 73.78
Gene sequence:
>1041_bases GTGACCTCGATCTCGCAGCGCTGGCGACGCCTCGACCCGGGACTGGTCCTGGGCGCGGCGGTGCTGGTCGTGCTGGTCCT CGTCGCCCTGACCACCAACGTGCAGCTGATCGCGGTCTTCGCCGCCGGCCCGATCGTGTCGAGCCTGCTCACCTCGCCGC GGCGGACCGCGCTGCTGGGGGTCGCGGCTGTCGGCCTCGCGCTGCTGTCCGGCCGTTGGCAGCACGACGTCGGGACCCTC GACTGGTCGGTGCGCGTCGTGCTCTGCGTGCTGCTCTCGCTCCTCGCCGTGCAGGGCGCTGCGCTGCGGGAGCACCGGGA GGGCCGCCTGCAGCGGATGACGGTCATCGCGGAGACCGCCCAGCGGGCGGTGCTCCGCTCGATGCCGACCGCGATCGGTT CGATCGGCCTGGCGGCGCGCTACGTCTCGGCGACCGCCGAGGCGCTGGTCGGGGGCGACCTGTACGAGGTCGCCGCGACG CCGTTCGGCGTCCGGGTCATCGTCGGCGACGTCCGTGGCAAGGGCCTGGAGGCCGTGCAGACCGCGGCCGCGGTGCTCGG TGCCTTCCGGGCAGCCGCGTTCACCGCCCCCGACGTCGCCGACCTGGCGCGCACGATCGACGACACCCTGGCGCGGATGA TCGGTGAGGAGGAGTTCGTCACCGCCATCGTGGGCGAGTTCCACGGCGATCGGGTCGCCCTGGCCAACTGCGGCCACCAC CCGCCGCTCCTGGTGGTCGACGCCGCCGTGACGACCACGGACACCGGTGAGCCGACGCTCCCACTCGGGCTCGGCGCGGT ACCTGTGCTCACCGAGCACCCGTGGCCGGTCGGCGCCCGGATGCTCTTCTACACCGACGGGCTGGTCGAGACCCGGGACC GGCAGGGACGGTTCTTCCCTTTCGAGGACCACGCCGCCGAGCTCGGCGAGGGCACCGTCGAGGAGGCGCTGGACCGGTTG GTGGCGCGGCTGCTCGCCTGGAGCGGCCAGCGGATGGCCGACGACCTCGCACTGGTGCTCGCCGAGAGCGAGGGCCGCTG A
Upstream 100 bases:
>100_bases TGATCTCGGTGACGACCAGGTCGGTGGGCGGTTCGAAGTCGGGGAAGTCGATCTCGGGCTTGTCCATGTGCCTCAGCCTA GGTGCTGACAGGATCGGGTC
Downstream 100 bases:
>100_bases CCCGGGTCCCGCGCACCCGCCAAGGGACCGTCAGGTCTGGTGGACGTAGCTGTCGAGCTGGTCGCGCTCGAACTCCAGCT GGTCGATGCGGTGCTTGACC
Product: stage II sporulation E family protein
Products: NA
Alternate protein names: Protein Serine/Threonine Phosphatase; Magnesium Or Manganese-Dependent Protein Phosphatase; Serine Phosphatase; Stage II Sporulation E Family Protein; Phosphatase; Integral Membrane Serine Phosphatase; C-Like; Membrane Phosphatase; Serine/Threonine Phosphatase; Multi-Sensor Histidine Kinase; PAS/PAC Sensor Protein; Regulatory Protein Phosphatase
Number of amino acids: Translated: 346; Mature: 345
Protein sequence:
>346_residues MTSISQRWRRLDPGLVLGAAVLVVLVLVALTTNVQLIAVFAAGPIVSSLLTSPRRTALLGVAAVGLALLSGRWQHDVGTL DWSVRVVLCVLLSLLAVQGAALREHREGRLQRMTVIAETAQRAVLRSMPTAIGSIGLAARYVSATAEALVGGDLYEVAAT PFGVRVIVGDVRGKGLEAVQTAAAVLGAFRAAAFTAPDVADLARTIDDTLARMIGEEEFVTAIVGEFHGDRVALANCGHH PPLLVVDAAVTTTDTGEPTLPLGLGAVPVLTEHPWPVGARMLFYTDGLVETRDRQGRFFPFEDHAAELGEGTVEEALDRL VARLLAWSGQRMADDLALVLAESEGR
Sequences:
>Translated_346_residues MTSISQRWRRLDPGLVLGAAVLVVLVLVALTTNVQLIAVFAAGPIVSSLLTSPRRTALLGVAAVGLALLSGRWQHDVGTL DWSVRVVLCVLLSLLAVQGAALREHREGRLQRMTVIAETAQRAVLRSMPTAIGSIGLAARYVSATAEALVGGDLYEVAAT PFGVRVIVGDVRGKGLEAVQTAAAVLGAFRAAAFTAPDVADLARTIDDTLARMIGEEEFVTAIVGEFHGDRVALANCGHH PPLLVVDAAVTTTDTGEPTLPLGLGAVPVLTEHPWPVGARMLFYTDGLVETRDRQGRFFPFEDHAAELGEGTVEEALDRL VARLLAWSGQRMADDLALVLAESEGR >Mature_345_residues TSISQRWRRLDPGLVLGAAVLVVLVLVALTTNVQLIAVFAAGPIVSSLLTSPRRTALLGVAAVGLALLSGRWQHDVGTLD WSVRVVLCVLLSLLAVQGAALREHREGRLQRMTVIAETAQRAVLRSMPTAIGSIGLAARYVSATAEALVGGDLYEVAATP FGVRVIVGDVRGKGLEAVQTAAAVLGAFRAAAFTAPDVADLARTIDDTLARMIGEEEFVTAIVGEFHGDRVALANCGHHP PLLVVDAAVTTTDTGEPTLPLGLGAVPVLTEHPWPVGARMLFYTDGLVETRDRQGRFFPFEDHAAELGEGTVEEALDRLV ARLLAWSGQRMADDLALVLAESEGR
Specific function: Unknown
COG id: COG2208
COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36598; Mature: 36467
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSISQRWRRLDPGLVLGAAVLVVLVLVALTTNVQLIAVFAAGPIVSSLLTSPRRTALLG CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHCCCHHHHHHH VAAVGLALLSGRWQHDVGTLDWSVRVVLCVLLSLLAVQGAALREHREGRLQRMTVIAETA HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH QRAVLRSMPTAIGSIGLAARYVSATAEALVGGDLYEVAATPFGVRVIVGDVRGKGLEAVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEECCCCCCHHHHH TAAAVLGAFRAAAFTAPDVADLARTIDDTLARMIGEEEFVTAIVGEFHGDRVALANCGHH HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEECCCCC PPLLVVDAAVTTTDTGEPTLPLGLGAVPVLTEHPWPVGARMLFYTDGLVETRDRQGRFFP CCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC FEDHAAELGEGTVEEALDRLVARLLAWSGQRMADDLALVLAESEGR CHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHEEEECCCCC >Mature Secondary Structure TSISQRWRRLDPGLVLGAAVLVVLVLVALTTNVQLIAVFAAGPIVSSLLTSPRRTALLG CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHCCCHHHHHHH VAAVGLALLSGRWQHDVGTLDWSVRVVLCVLLSLLAVQGAALREHREGRLQRMTVIAETA HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH QRAVLRSMPTAIGSIGLAARYVSATAEALVGGDLYEVAATPFGVRVIVGDVRGKGLEAVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEECCCCCCHHHHH TAAAVLGAFRAAAFTAPDVADLARTIDDTLARMIGEEEFVTAIVGEFHGDRVALANCGHH HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEECCCCC PPLLVVDAAVTTTDTGEPTLPLGLGAVPVLTEHPWPVGARMLFYTDGLVETRDRQGRFFP CCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC FEDHAAELGEGTVEEALDRLVARLLAWSGQRMADDLALVLAESEGR CHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA