Click here to switch to the map view.

The map label for this gene is ssnA [H]

Identifier: 119715864

GI number: 119715864

Start: 1729001

End: 1730425

Strand: Direct

Name: ssnA [H]

Synonym: Noca_1629

Alternate gene names: 119715864

Gene position: 1729001-1730425 (Clockwise)

Preceding gene: 119715863

Following gene: 119715865

Centisome position: 34.68

GC content: 74.32

Gene sequence:

>1425_bases
GTGGACCGTGTGGTCCGGGAGCACGCTGAGGAGGATCGGAGCAGAGGAGCGCACATCGTGGCGGCCGACATTCGAGACGC
TGTCCCCTCCTTGGCGCTGTGCGGCGCCACGATCGTCGTCGCGCTCGACCCTCCGGAGGTGGTCTCCGGCGACGTCGTGA
TCGCGGGCGACCGGATCCTGACGGTCGGCACCGCGCCGCCCGGCGTGCCGCGGCGCGACTGCTCGGGGACGCTGCTCCTG
CCCGGCAACGTCTGCGCCCACCACCACCTCTACTCGGCGCTCAGTCGCGGGATGCCGTACCACCTCGCTCCGCCGGCCAC
GTTCACCGAGATCCTCCAGCGGGTCTGGTGGCGCCTCGACCGCGCCCTGGACGAGCAGTCGATCCGGGCCTCGGCGCTGC
GCGGCGGCCTCGACGCGTTGCGTGCCGGCACCACGACGATCGTGGACCACCACGCCTCGCCCAACGCCATCGACGGCTCG
CTCGACATCATCGCCGAGACCCTGGCGGAGCTGGGGGTGCGCAGCGTCCTGTGCTACGAGGTCAGCGACCGGGACGGACC
CGAGCGCGCCGCCGCCGGCATCGCCGAGAACGGCCGCTTCCTCGCGCGGGCGCGTGGGTTGACCCGCGGTCTGATGGGCG
CGCACGCGTCGTTCACGCTCTCCGACGGCACCCTCGCCCAGCTGGTCGACGCGGCCGATCGGGCCGGGACCGGCGTGCAC
ATCCACGTCGCGGAGGACGCCGCCGACCAGGCCGACGCCCGCGCGCGCAGCAGTCAGGGGGTCGTCGAGCGGCTCGACCG
GGCCGGGGTGATCACCGAGCGGGCCCTGCTGGCCCACTGCGTCCACGTCACACCGGCCGAGATCCGCGCCGTCGTCGACC
TCGGTGCCACCGTCGTCTGCAACCCGCGCAGCAACATGAACAACTCCGTGGGCCACTCGCCCTTCAACCACCTCGCGCCG
GGTGTCGGCGGTGGCGTTGCCCTCGGCACCGACGGCATCGGCGGCGACCTGTTCGCCGAGTCCCAGGTCGGCTACTTCCG
GACCCGCGAGAGCGAGGTCGGAACGCCCGGCAGCTGGCCGCTCGCGCGCCTCGCCGACGGCGCCCGCTTCGCCGGCCGCG
TCCACGGGGAGCCCCTGCTCGGCAGCCTCCGGCCCGGTGCCCCGGCCGACCTCGTGGTGCTCGACTATCCGACGCCGACC
CCCGTCACCGCCGACAACCTGGTCGGCCACTGGGTCTTCGGCCTGTCCTCCGCCCAGGTGCGCGACGTGCTCGTCGCCGG
CGACCTGGTCGTCGCCGACCGCCGGTCGACCCGGGTCGACGAGGCGGAGGCCGCCGCGGCGGGCTCGGTCGAGGCCGAGC
GGCTCTGGGCCCGGATGGACGCGATCCCTGCGCACGACTTCACGCCCGAGAGGAGCAGGCCATGA

Upstream 100 bases:

>100_bases
TGGCCGCCGGCGACGTCCACCCCGACGCGCGCGTTGGCGTGCTCTTCACCGGCGTCGAGCGCCAGGACCAGGCAGGGACC
AGGCGGGTCCATGGACCCTA

Downstream 100 bases:

>100_bases
CGCAGCCGACGAGGGTGGCGCTCTACCTCCAGGACCTCCACCCGCTGCGCGAGGGGATGGAGTACGCCCGCTACGCCGAG
GAGCGCGGCTTCGACGCCGT

Product: amidohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 474; Mature: 474

Protein sequence:

>474_residues
MDRVVREHAEEDRSRGAHIVAADIRDAVPSLALCGATIVVALDPPEVVSGDVVIAGDRILTVGTAPPGVPRRDCSGTLLL
PGNVCAHHHLYSALSRGMPYHLAPPATFTEILQRVWWRLDRALDEQSIRASALRGGLDALRAGTTTIVDHHASPNAIDGS
LDIIAETLAELGVRSVLCYEVSDRDGPERAAAGIAENGRFLARARGLTRGLMGAHASFTLSDGTLAQLVDAADRAGTGVH
IHVAEDAADQADARARSSQGVVERLDRAGVITERALLAHCVHVTPAEIRAVVDLGATVVCNPRSNMNNSVGHSPFNHLAP
GVGGGVALGTDGIGGDLFAESQVGYFRTRESEVGTPGSWPLARLADGARFAGRVHGEPLLGSLRPGAPADLVVLDYPTPT
PVTADNLVGHWVFGLSSAQVRDVLVAGDLVVADRRSTRVDEAEAAAAGSVEAERLWARMDAIPAHDFTPERSRP

Sequences:

>Translated_474_residues
MDRVVREHAEEDRSRGAHIVAADIRDAVPSLALCGATIVVALDPPEVVSGDVVIAGDRILTVGTAPPGVPRRDCSGTLLL
PGNVCAHHHLYSALSRGMPYHLAPPATFTEILQRVWWRLDRALDEQSIRASALRGGLDALRAGTTTIVDHHASPNAIDGS
LDIIAETLAELGVRSVLCYEVSDRDGPERAAAGIAENGRFLARARGLTRGLMGAHASFTLSDGTLAQLVDAADRAGTGVH
IHVAEDAADQADARARSSQGVVERLDRAGVITERALLAHCVHVTPAEIRAVVDLGATVVCNPRSNMNNSVGHSPFNHLAP
GVGGGVALGTDGIGGDLFAESQVGYFRTRESEVGTPGSWPLARLADGARFAGRVHGEPLLGSLRPGAPADLVVLDYPTPT
PVTADNLVGHWVFGLSSAQVRDVLVAGDLVVADRRSTRVDEAEAAAAGSVEAERLWARMDAIPAHDFTPERSRP
>Mature_474_residues
MDRVVREHAEEDRSRGAHIVAADIRDAVPSLALCGATIVVALDPPEVVSGDVVIAGDRILTVGTAPPGVPRRDCSGTLLL
PGNVCAHHHLYSALSRGMPYHLAPPATFTEILQRVWWRLDRALDEQSIRASALRGGLDALRAGTTTIVDHHASPNAIDGS
LDIIAETLAELGVRSVLCYEVSDRDGPERAAAGIAENGRFLARARGLTRGLMGAHASFTLSDGTLAQLVDAADRAGTGVH
IHVAEDAADQADARARSSQGVVERLDRAGVITERALLAHCVHVTPAEIRAVVDLGATVVCNPRSNMNNSVGHSPFNHLAP
GVGGGVALGTDGIGGDLFAESQVGYFRTRESEVGTPGSWPLARLADGARFAGRVHGEPLLGSLRPGAPADLVVLDYPTPT
PVTADNLVGHWVFGLSSAQVRDVLVAGDLVVADRRSTRVDEAEAAAAGSVEAERLWARMDAIPAHDFTPERSRP

Specific function: Unknown

COG id: COG0402

COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATZ/TRZ family [H]

Homologues:

Organism=Escherichia coli, GI87082177, Length=441, Percent_Identity=37.4149659863946, Blast_Score=275, Evalue=5e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006680
- InterPro:   IPR011059
- InterPro:   IPR017700 [H]

Pfam domain/function: PF01979 Amidohydro_1 [H]

EC number: NA

Molecular weight: Translated: 49820; Mature: 49820

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRVVREHAEEDRSRGAHIVAADIRDAVPSLALCGATIVVALDPPEVVSGDVVIAGDRIL
CCHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHCCEEEEEEECCCCHHCCCEEEECCEEE
TVGTAPPGVPRRDCSGTLLLPGNVCAHHHLYSALSRGMPYHLAPPATFTEILQRVWWRLD
EECCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHH
RALDEQSIRASALRGGLDALRAGTTTIVDHHASPNAIDGSLDIIAETLAELGVRSVLCYE
HHHHHHHHHHHHHHCCHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCHHEEEEEE
VSDRDGPERAAAGIAENGRFLARARGLTRGLMGAHASFTLSDGTLAQLVDAADRAGTGVH
ECCCCCHHHHHHCHHCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCEE
IHVAEDAADQADARARSSQGVVERLDRAGVITERALLAHCVHVTPAEIRAVVDLGATVVC
EEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCCEEEE
NPRSNMNNSVGHSPFNHLAPGVGGGVALGTDGIGGDLFAESQVGYFRTRESEVGTPGSWP
CCCCCCCCCCCCCCHHHCCCCCCCCEEECCCCCCCCCEECCCCCEEEECCCCCCCCCCCC
LARLADGARFAGRVHGEPLLGSLRPGAPADLVVLDYPTPTPVTADNLVGHWVFGLSSAQV
HHHHCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCHHH
RDVLVAGDLVVADRRSTRVDEAEAAAAGSVEAERLWARMDAIPAHDFTPERSRP
HHEEEECCEEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MDRVVREHAEEDRSRGAHIVAADIRDAVPSLALCGATIVVALDPPEVVSGDVVIAGDRIL
CCHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHCCEEEEEEECCCCHHCCCEEEECCEEE
TVGTAPPGVPRRDCSGTLLLPGNVCAHHHLYSALSRGMPYHLAPPATFTEILQRVWWRLD
EECCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHH
RALDEQSIRASALRGGLDALRAGTTTIVDHHASPNAIDGSLDIIAETLAELGVRSVLCYE
HHHHHHHHHHHHHHCCHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCHHEEEEEE
VSDRDGPERAAAGIAENGRFLARARGLTRGLMGAHASFTLSDGTLAQLVDAADRAGTGVH
ECCCCCHHHHHHCHHCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCEE
IHVAEDAADQADARARSSQGVVERLDRAGVITERALLAHCVHVTPAEIRAVVDLGATVVC
EEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCCEEEE
NPRSNMNNSVGHSPFNHLAPGVGGGVALGTDGIGGDLFAESQVGYFRTRESEVGTPGSWP
CCCCCCCCCCCCCCHHHCCCCCCCCEEECCCCCCCCCEECCCCCEEEECCCCCCCCCCCC
LARLADGARFAGRVHGEPLLGSLRPGAPADLVVLDYPTPTPVTADNLVGHWVFGLSSAQV
HHHHCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCHHH
RDVLVAGDLVVADRRSTRVDEAEAAAAGSVEAERLWARMDAIPAHDFTPERSRP
HHEEEECCEEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7764507; 9278503; 10074077 [H]