Click here to switch to the map view.

The map label for this gene is thrC [H]

Identifier: 119715863

GI number: 119715863

Start: 1727616

End: 1729001

Strand: Direct

Name: thrC [H]

Synonym: Noca_1628

Alternate gene names: 119715863

Gene position: 1727616-1729001 (Clockwise)

Preceding gene: 119715862

Following gene: 119715864

Centisome position: 34.65

GC content: 75.76

Gene sequence:

>1386_bases
GTGATCGCACCCGCCAGCCGCCTGGTCTGCTGGGGCTGCGGCGGCGCACCGGACCCGGCCGATCCGTACCCGTTCCGCTG
CCCCCGAGCCGGCGTCGGTGACGTCGACCACGTCCTGGTGCGCGTCCTCGACCTCGACCGGGTGCGGTTCCCGGACGGGC
CGGCGGGGACGGCTCCGCCGTTCGTGCAGTACGGCGGGCTCCTGCACAGCCACCACCGCGCGACCGCCGCGGGCGTCGGC
GTGGCGGAGCTCGACGACCTCGTCACGCTGCTGGATGAGGCCGTGGCTCGGGTCGCCGGCGCGGGGTTCCGGGCCACGCC
GTTCGGTCGCGACGACACCCTGTCGGAGCGGCTCGGGTTCAGCAGCGTCGGTGGCGTGTGGGTCAAGGACGAGACCGGCA
ACGTGGCCGGATCGCACAAGGGCCGCCACCTCATGGGCGTCCTGCTCCACCTCGAGGTCGCGGAGCGTCTCGGCCTCGCG
GCGCCGTCGGCACGGCCGGACCTGGCGATCGCCAGCTGCGGCAACGCCGCCCTCGCCGCCGCAGTCGTCGCCCGCGCCGC
CGGCCGCCGGCTCCGGGTCTTCGTCCCCGTCGACGCCGACCCGGCGGTGCTGGGCGACCTCCGCGACCTGGGCGCAGACG
TGGTCACCTGCGCGCGCACCGCGGACGCGGACGGCGACCCGGCGTACCTGCGGCTGCAGGCGGAGCTGGCCGCCGGCGCA
CTGCCGTTCACGTGCCAGGGCAACGAGAACGGACTGGTGATCGAGGGCGGTGAGACGCTGGGCTACGAGATCGCGTCCGA
CCTCCGGGCCCAGCGCATCGACCTGGACCACCTCGTGGTCCAGGTCGGCGGCGGCGCCCTGGCCAGCTCCTGCATCCAGG
CGCTCGACGAGGCGGTCGCGCTCGGTGTCCTGGCCCGGCAGCCGCGGGTGCACACCGTGCAGACCACGGGCGGCCACCCG
CTCGAGCGCGCCTACACCCGGGTCCGGGACGGCCTGGGCCCAGCACCCGGTGCGGCCGAGATCGACGAGGCCCTCCACGC
CGCGGCGATCCACCGGTCGGCGTACATGTGGCCGTGGGAGGGCGAGCCCCGCAGCATCGCCACCGGCATCCTCGACGACG
AGACGTACGACTGGCGAGCCGTCGTCGGCGGGATGCTCCGGACCGGAGGCCGGTCGCTGGTCGTGTCCGAGGAGCGGCTC
GCCGGTGCCCACGCCCTCGGTCGCGCGGCGGGCTACCGAGTCGACCCCACCGGCTCCTCCGGGTTGGCCGGCCTCCTGGA
CCTGGTGGCCGCCGGCGACGTCCACCCCGACGCGCGCGTTGGCGTGCTCTTCACCGGCGTCGAGCGCCAGGACCAGGCAG
GGACCAGGCGGGTCCATGGACCCTAG

Upstream 100 bases:

>100_bases
CGTTCTGGAGCGGCCTGCGCACCAGGATCGACTCCTGGGACGAGCTGATCGCGGACTTCAACGCGCGCACGGGCCTCGCG
GGCGCCGGGTCCGGCGCGGC

Downstream 100 bases:

>100_bases
TGGACCGTGTGGTCCGGGAGCACGCTGAGGAGGATCGGAGCAGAGGAGCGCACATCGTGGCGGCCGACATTCGAGACGCT
GTCCCCTCCTTGGCGCTGTG

Product: pyridoxal-5'-phosphate-dependent enzyme subunit beta

Products: NA

Alternate protein names: TS [H]

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MIAPASRLVCWGCGGAPDPADPYPFRCPRAGVGDVDHVLVRVLDLDRVRFPDGPAGTAPPFVQYGGLLHSHHRATAAGVG
VAELDDLVTLLDEAVARVAGAGFRATPFGRDDTLSERLGFSSVGGVWVKDETGNVAGSHKGRHLMGVLLHLEVAERLGLA
APSARPDLAIASCGNAALAAAVVARAAGRRLRVFVPVDADPAVLGDLRDLGADVVTCARTADADGDPAYLRLQAELAAGA
LPFTCQGNENGLVIEGGETLGYEIASDLRAQRIDLDHLVVQVGGGALASSCIQALDEAVALGVLARQPRVHTVQTTGGHP
LERAYTRVRDGLGPAPGAAEIDEALHAAAIHRSAYMWPWEGEPRSIATGILDDETYDWRAVVGGMLRTGGRSLVVSEERL
AGAHALGRAAGYRVDPTGSSGLAGLLDLVAAGDVHPDARVGVLFTGVERQDQAGTRRVHGP

Sequences:

>Translated_461_residues
MIAPASRLVCWGCGGAPDPADPYPFRCPRAGVGDVDHVLVRVLDLDRVRFPDGPAGTAPPFVQYGGLLHSHHRATAAGVG
VAELDDLVTLLDEAVARVAGAGFRATPFGRDDTLSERLGFSSVGGVWVKDETGNVAGSHKGRHLMGVLLHLEVAERLGLA
APSARPDLAIASCGNAALAAAVVARAAGRRLRVFVPVDADPAVLGDLRDLGADVVTCARTADADGDPAYLRLQAELAAGA
LPFTCQGNENGLVIEGGETLGYEIASDLRAQRIDLDHLVVQVGGGALASSCIQALDEAVALGVLARQPRVHTVQTTGGHP
LERAYTRVRDGLGPAPGAAEIDEALHAAAIHRSAYMWPWEGEPRSIATGILDDETYDWRAVVGGMLRTGGRSLVVSEERL
AGAHALGRAAGYRVDPTGSSGLAGLLDLVAAGDVHPDARVGVLFTGVERQDQAGTRRVHGP
>Mature_461_residues
MIAPASRLVCWGCGGAPDPADPYPFRCPRAGVGDVDHVLVRVLDLDRVRFPDGPAGTAPPFVQYGGLLHSHHRATAAGVG
VAELDDLVTLLDEAVARVAGAGFRATPFGRDDTLSERLGFSSVGGVWVKDETGNVAGSHKGRHLMGVLLHLEVAERLGLA
APSARPDLAIASCGNAALAAAVVARAAGRRLRVFVPVDADPAVLGDLRDLGADVVTCARTADADGDPAYLRLQAELAAGA
LPFTCQGNENGLVIEGGETLGYEIASDLRAQRIDLDHLVVQVGGGALASSCIQALDEAVALGVLARQPRVHTVQTTGGHP
LERAYTRVRDGLGPAPGAAEIDEALHAAAIHRSAYMWPWEGEPRSIATGILDDETYDWRAVVGGMLRTGGRSLVVSEERL
AGAHALGRAAGYRVDPTGSSGLAGLLDLVAAGDVHPDARVGVLFTGVERQDQAGTRRVHGP

Specific function: Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine [H]

COG id: COG0498

COG function: function code E; Threonine synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the threonine synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001926
- InterPro:   IPR000634
- InterPro:   IPR004450 [H]

Pfam domain/function: PF00291 PALP [H]

EC number: =4.2.3.1 [H]

Molecular weight: Translated: 47869; Mature: 47869

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAPASRLVCWGCGGAPDPADPYPFRCPRAGVGDVDHVLVRVLDLDRVRFPDGPAGTAPP
CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCC
FVQYGGLLHSHHRATAAGVGVAELDDLVTLLDEAVARVAGAGFRATPFGRDDTLSERLGF
HHHHCCHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCC
SSVGGVWVKDETGNVAGSHKGRHLMGVLLHLEVAERLGLAAPSARPDLAIASCGNAALAA
CCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHH
AVVARAAGRRLRVFVPVDADPAVLGDLRDLGADVVTCARTADADGDPAYLRLQAELAAGA
HHHHHHCCCEEEEEEECCCCCHHHHHHHHHCHHHEEHHHCCCCCCCCEEEEEEEEHHCCC
LPFTCQGNENGLVIEGGETLGYEIASDLRAQRIDLDHLVVQVGGGALASSCIQALDEAVA
CCEEEECCCCCEEEECCCCCCHHHHHHHHHHHCCHHHEEEEECCCHHHHHHHHHHHHHHH
LGVLARQPRVHTVQTTGGHPLERAYTRVRDGLGPAPGAAEIDEALHAAAIHRSAYMWPWE
HHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEECCCC
GEPRSIATGILDDETYDWRAVVGGMLRTGGRSLVVSEERLAGAHALGRAAGYRVDPTGSS
CCCCHHEECCCCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCEECCCCCC
GLAGLLDLVAAGDVHPDARVGVLFTGVERQDQAGTRRVHGP
HHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIAPASRLVCWGCGGAPDPADPYPFRCPRAGVGDVDHVLVRVLDLDRVRFPDGPAGTAPP
CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCC
FVQYGGLLHSHHRATAAGVGVAELDDLVTLLDEAVARVAGAGFRATPFGRDDTLSERLGF
HHHHCCHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCC
SSVGGVWVKDETGNVAGSHKGRHLMGVLLHLEVAERLGLAAPSARPDLAIASCGNAALAA
CCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHH
AVVARAAGRRLRVFVPVDADPAVLGDLRDLGADVVTCARTADADGDPAYLRLQAELAAGA
HHHHHHCCCEEEEEEECCCCCHHHHHHHHHCHHHEEHHHCCCCCCCCEEEEEEEEHHCCC
LPFTCQGNENGLVIEGGETLGYEIASDLRAQRIDLDHLVVQVGGGALASSCIQALDEAVA
CCEEEECCCCCEEEECCCCCCHHHHHHHHHHHCCHHHEEEEECCCHHHHHHHHHHHHHHH
LGVLARQPRVHTVQTTGGHPLERAYTRVRDGLGPAPGAAEIDEALHAAAIHRSAYMWPWE
HHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEECCCC
GEPRSIATGILDDETYDWRAVVGGMLRTGGRSLVVSEERLAGAHALGRAAGYRVDPTGSS
CCCCHHEECCCCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCEECCCCCC
GLAGLLDLVAAGDVHPDARVGVLFTGVERQDQAGTRRVHGP
HHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]