| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is atzB [H]
Identifier: 119715861
GI number: 119715861
Start: 1724724
End: 1726055
Strand: Direct
Name: atzB [H]
Synonym: Noca_1626
Alternate gene names: 119715861
Gene position: 1724724-1726055 (Clockwise)
Preceding gene: 119715860
Following gene: 119715862
Centisome position: 34.59
GC content: 74.02
Gene sequence:
>1332_bases GTGACACTCGACGCCGACGACCGCGAGATCGCCGGGGGCTGGATCGCCCTCGACCAGGGCTTGGTCGCGGCCATCGGGGG GCCGGGCGACGCACCCCCGCCCGCGACCCGGGTGCTGCGCGCGGACGGCTGCCTGGTCACCCCCGGGCTGATCAACACCC ACCACCACATCTACCAGAACCTGACCCGCGCCCACCGGCCCTCGGTCAACACCTCGCTGTTCACCTGGCTCACCACGCTC TACCCCCTCTGGGCGGGTCTCGACGAGGAGGCGGCGTACCTCTCGGCCTGGGTCGGTCTGGCCGAGCTCGCGCTCGGCGG CTGCACGACCACCACCGACCACCTCTACGTCCACCCGCGCCACGGCGGTGACCTGATCTCCGCCGAGATCACCGCGGCGA CCGAGCTCGGCATGCGGTTCCACCCGACCCGCGGCTCGATGAGCCTGTCCGAGAAGGACGGCGGCCTGCCGCCGGACTCC GTCGTGCAGGACGACGACGAGATCCTCGCGGACAGCGAGCGGCTGGTCGCCCGCCACCACGACCCGTCCTGGGGCGCGAT GGTGCGGATCGCACTGGCGCCCTGCTCGCCGTTCTCGGTCTCCTCCGACCTGATGCGGCGTACGGCGGAGCTGGCCGAGC GGCTCGACGTCCGGCTGCACACCCACCTCGCCGAAGACCCCGACGAGGACCTCTTCGCCGCGAAGGCCTTCGGTCGCCGC ACCATCGACCACTTCGAGGACGTCGGCTGGATGTCCGACCGCAGCTGGGTGGCGCACTGCATCTACCCCAACGACGACGA GGTACGGCGGCTCGGCGCCGCCGGTGTCGGCGTCGCCCACTGTCCCTCGTCGAACATGCTGATCGGCGGGGGTGGGCTGG CGCCGGTCGTGGAGCTGCGCGCGGCCGGGGCCCCGGTCGGGATCGGCTGCGACGGCTCCGCGTCCACCGACCACGCGTCA CTGTGGCTGGAGGCCCGGACCGCCCTCCTGCTGGGGCACCAGCGCAAGGGGCCGACCGGCATGACCGCCCGCGACGTGCT CGACATCGCGACCCGCGGGTCGGCCGCGTGCCTGGGCCGGACGGGTGAGCTCGGGACGTTGAGCGTCGGTGCGGTCGGCG ACGTCGTCTGCTGGCCGCTGACCGGGATCGCGTTCGCCGGGGCACTCACCGACCCGGTCGAGGCGTGGCTGCGGTGCGGC CCGGTCGCGGCCCGGCACACGATCGTCGCCGGCCGGGCCGTCGTGGTGGACGCCGCCCTCGTCCACCCCGGTCTCGAGGA GATCCTGCACCGCCACCGTGCCGCCGCCCGCCGCCTCCAGCGGCTGGCCTGA
Upstream 100 bases:
>100_bases CTCACGCGCGGGCCGTGCGATTCCGCCGACACGGCCGTGCGGGGATGGCTAGCGTCGCGGTGTGACCGTCGACTTGTTGA TCGACGGGGCCGAGCATGTC
Downstream 100 bases:
>100_bases CCACAGCCCGCCACAGCCTGACCAGAGATCGGAGCCCGCCATGTCGTCCCTAGGAGTCGAAGGCCACGTCGTCGACGCAG GCAGCCGGGACCGCGCGGTC
Product: amidohydrolase
Products: NA
Alternate protein names: Hydroxyatrazine hydrolase [H]
Number of amino acids: Translated: 443; Mature: 442
Protein sequence:
>443_residues MTLDADDREIAGGWIALDQGLVAAIGGPGDAPPPATRVLRADGCLVTPGLINTHHHIYQNLTRAHRPSVNTSLFTWLTTL YPLWAGLDEEAAYLSAWVGLAELALGGCTTTTDHLYVHPRHGGDLISAEITAATELGMRFHPTRGSMSLSEKDGGLPPDS VVQDDDEILADSERLVARHHDPSWGAMVRIALAPCSPFSVSSDLMRRTAELAERLDVRLHTHLAEDPDEDLFAAKAFGRR TIDHFEDVGWMSDRSWVAHCIYPNDDEVRRLGAAGVGVAHCPSSNMLIGGGGLAPVVELRAAGAPVGIGCDGSASTDHAS LWLEARTALLLGHQRKGPTGMTARDVLDIATRGSAACLGRTGELGTLSVGAVGDVVCWPLTGIAFAGALTDPVEAWLRCG PVAARHTIVAGRAVVVDAALVHPGLEEILHRHRAAARRLQRLA
Sequences:
>Translated_443_residues MTLDADDREIAGGWIALDQGLVAAIGGPGDAPPPATRVLRADGCLVTPGLINTHHHIYQNLTRAHRPSVNTSLFTWLTTL YPLWAGLDEEAAYLSAWVGLAELALGGCTTTTDHLYVHPRHGGDLISAEITAATELGMRFHPTRGSMSLSEKDGGLPPDS VVQDDDEILADSERLVARHHDPSWGAMVRIALAPCSPFSVSSDLMRRTAELAERLDVRLHTHLAEDPDEDLFAAKAFGRR TIDHFEDVGWMSDRSWVAHCIYPNDDEVRRLGAAGVGVAHCPSSNMLIGGGGLAPVVELRAAGAPVGIGCDGSASTDHAS LWLEARTALLLGHQRKGPTGMTARDVLDIATRGSAACLGRTGELGTLSVGAVGDVVCWPLTGIAFAGALTDPVEAWLRCG PVAARHTIVAGRAVVVDAALVHPGLEEILHRHRAAARRLQRLA >Mature_442_residues TLDADDREIAGGWIALDQGLVAAIGGPGDAPPPATRVLRADGCLVTPGLINTHHHIYQNLTRAHRPSVNTSLFTWLTTLY PLWAGLDEEAAYLSAWVGLAELALGGCTTTTDHLYVHPRHGGDLISAEITAATELGMRFHPTRGSMSLSEKDGGLPPDSV VQDDDEILADSERLVARHHDPSWGAMVRIALAPCSPFSVSSDLMRRTAELAERLDVRLHTHLAEDPDEDLFAAKAFGRRT IDHFEDVGWMSDRSWVAHCIYPNDDEVRRLGAAGVGVAHCPSSNMLIGGGGLAPVVELRAAGAPVGIGCDGSASTDHASL WLEARTALLLGHQRKGPTGMTARDVLDIATRGSAACLGRTGELGTLSVGAVGDVVCWPLTGIAFAGALTDPVEAWLRCGP VAARHTIVAGRAVVVDAALVHPGLEEILHRHRAAARRLQRLA
Specific function: Catalyzes the deamination reaction of hydroxyatrazine to N-isopropylammelide (dihydroxy-isopropyl-atrazine). The enzyme is also capable of catalyzing some dechlorinating reactions [H]
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATZ/TRZ family [H]
Homologues:
Organism=Homo sapiens, GI4758426, Length=342, Percent_Identity=22.8070175438596, Blast_Score=82, Evalue=1e-15, Organism=Escherichia coli, GI1789249, Length=426, Percent_Identity=25.3521126760563, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI87082177, Length=334, Percent_Identity=23.0538922155689, Blast_Score=72, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6319963, Length=346, Percent_Identity=24.8554913294798, Blast_Score=87, Evalue=6e-18, Organism=Drosophila melanogaster, GI24643849, Length=324, Percent_Identity=25.3086419753086, Blast_Score=81, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.99.3 [H]
Molecular weight: Translated: 47022; Mature: 46891
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: PS00606 B_KETOACYL_SYNTHASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLDADDREIAGGWIALDQGLVAAIGGPGDAPPPATRVLRADGCLVTPGLINTHHHIYQN CCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCHHHEEECCCCEECCCHHHHHHHHHHH LTRAHRPSVNTSLFTWLTTLYPLWAGLDEEAAYLSAWVGLAELALGGCTTTTDHLYVHPR HHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC HGGDLISAEITAATELGMRFHPTRGSMSLSEKDGGLPPDSVVQDDDEILADSERLVARHH CCCCEEEEEHHHHHHCCCEECCCCCCCEECCCCCCCCCCHHCCCCHHHHHCCHHHHHHCC DPSWGAMVRIALAPCSPFSVSSDLMRRTAELAERLDVRLHTHLAEDPDEDLFAAKAFGRR CCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH TIDHFEDVGWMSDRSWVAHCIYPNDDEVRRLGAAGVGVAHCPSSNMLIGGGGLAPVVELR HHHHHHHCCCCCCCCEEEEEECCCHHHHHHHCCCCCCEEECCCCCEEEECCCCCHHHHHH AAGAPVGIGCDGSASTDHASLWLEARTALLLGHQRKGPTGMTARDVLDIATRGSAACLGR HCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEECC TGELGTLSVGAVGDVVCWPLTGIAFAGALTDPVEAWLRCGPVAARHTIVAGRAVVVDAAL CCCCCEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHEEEECCHHEEHHHH VHPGLEEILHRHRAAARRLQRLA HCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TLDADDREIAGGWIALDQGLVAAIGGPGDAPPPATRVLRADGCLVTPGLINTHHHIYQN CCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCHHHEEECCCCEECCCHHHHHHHHHHH LTRAHRPSVNTSLFTWLTTLYPLWAGLDEEAAYLSAWVGLAELALGGCTTTTDHLYVHPR HHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC HGGDLISAEITAATELGMRFHPTRGSMSLSEKDGGLPPDSVVQDDDEILADSERLVARHH CCCCEEEEEHHHHHHCCCEECCCCCCCEECCCCCCCCCCHHCCCCHHHHHCCHHHHHHCC DPSWGAMVRIALAPCSPFSVSSDLMRRTAELAERLDVRLHTHLAEDPDEDLFAAKAFGRR CCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH TIDHFEDVGWMSDRSWVAHCIYPNDDEVRRLGAAGVGVAHCPSSNMLIGGGGLAPVVELR HHHHHHHCCCCCCCCEEEEEECCCHHHHHHHCCCCCCEEECCCCCEEEECCCCCHHHHHH AAGAPVGIGCDGSASTDHASLWLEARTALLLGHQRKGPTGMTARDVLDIATRGSAACLGR HCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEECC TGELGTLSVGAVGDVVCWPLTGIAFAGALTDPVEAWLRCGPVAARHTIVAGRAVVVDAAL CCCCCEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHEEEECCHHEEHHHH VHPGLEEILHRHRAAARRLQRLA HCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9055410 [H]