| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715838
Identifier: 119715838
GI number: 119715838
Start: 1700591
End: 1702201
Strand: Reverse
Name: 119715838
Synonym: Noca_1602
Alternate gene names: NA
Gene position: 1702201-1700591 (Counterclockwise)
Preceding gene: 119715839
Following gene: 119715837
Centisome position: 34.14
GC content: 71.69
Gene sequence:
>1611_bases ATGACCACAGAGCTCTCGCGAAGCGATGCCGTCACCGCGCCGGCGGATCTGCCGATGCGGGGGTCGGGGCGGCACCCCTC CCCGGTGAACTGGGTTCGAACCCATCCGGTGGCGGCCGCCTGCCTGGCGACTGCTGTGGCGCATGCGATGTTCCTCAGCA CGCGGCTGGGTGACGACGAGGGCGGCTTCCTCGCGGTCGCCCAGCACTGGGGCGTTCCGGGTCGGTACCTGTACGGACCG CTGTGGGTGGACCGCCCTCCGGGCCTGATCGCGGTGCTCGCGTTGGCCGCGCACCTGGGTCCCTACGGCGCGCGAATCGT CGCCCTGGCCGTCGCGGTCGCGCTGGTGGCCGCCGCGGGCTGGGCGGCCGCGGCGGTGCGACGGCGGGCCTCGGGCTGGG GTGCCTGGACCGCCTTCGCGTTCGCTTGCAGTCCCCTCATTGGCGCCCAGCAGCTCAACGGCGAGCTCGTCGCGTCGGCG GCGGTGATGACCTCGGTGGCGGCGACGATGCACGCCCTGTACGGCGCGCATCGGCCGCGGCACTCGCGGGCGCTGGGTCT TCTCGCCGGAGGCATGGCGTTGGCGGCGGTGCTGACCAAGCAGAACTTCCTTGATGCCCTGGTCTTCGCGGCCGTGCTGC TGACCGGCACCGCCGTGACGAGCCGTCGGCGCCGGGTTGATGCGGTGAAGGTGGCAGGGTGGTTCACCCTTGGTGCGCTC ACCGCGGCCGGGACTGTGCTGTGGTGGGCGAGCGCCCAGCACCGTCTCGGCGCGATGCTGTACGCGATGTACGGCTTCCG CGCCGACGCTGCGGCCGTGATGGCGTCGTGGTCGTTCCACGCTCCGCTGACGCGGCTCGACAACCTCGCCGTCGCGGGCG TGCTCTGCGGCCTGCTGGTGGTGATGACCGTGGCCTTCGCGACCAACGTACGCCGACTGCGACGCCCCGACCCCCTGACT CTCGCGATCGCCGCCGCGACCGTGTCCGCGCTCGCCGGCATCGCTGCTGGCGGCAACTACTGGAGCCACTACCTGATCGC GCTGATCCCCATGACCTCGCTCGCCGCCGCCCTCACGGTCACGGCTCCGCCCATGGGTCCCGATGGGACGGCCGGGTCGC CCGTAGCGCGGCAGGGACATCGGATCCTCCGCGTCCTCGTGGTCGTGACGGTCGCGTTGACCGCTGGCACCGCCGTGGTG GTGGCCTATCGCGACGTGCGAGCCCCCAGCACAGTGGCGGCGACCGCCCGATGGATCGCGGACTCAGCCCGCCCTGGCGA CACGTTGACCGTGGCCTATACCCATGCCAACGTGCTCCAGGCCTCGGGTCTGGCCCCGGCCTATCCCTATGCGTGGAGCC TGCCCTTGCGCACGCTCGACCCGAACCTGGTTTTGCTCAGCGATCGCCTCCGCGCGGCCGACGGACCCACCTGGTTCCTC CAGTGGGATCAGGAGCACGCCTGGGGGCTCGACGCGAACGGCGCCCTGGATTCCGCCCTGCAGCAGCACTACCACGTCGC AGCCATCATCTGCGGTCACCAGGTCTGGCTTCGTGACACTGCCGCACGAGTCCTGGCCCGGGTTCCGAGTCCCGCGCTCT GCGCCCGATGA
Upstream 100 bases:
>100_bases GCTCTCGGAGGTCAGCGGCAGCGCCCCGTTGAACCAGGCCGCCGGCGCCCCCTCCCTGCTCAGCGCCTTCGGGCTGAAGA CGGCCCCCTAGTGACATGAC
Downstream 100 bases:
>100_bases CCGGGGCGGCGAGATTCACGCGGCACCGCGTCGTCGCCGGTTCAGGTGAGAGTCAGGTCGAGACCGTCATGGTTGCCCGC ATGAGCACCGACACCGTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 536; Mature: 535
Protein sequence:
>536_residues MTTELSRSDAVTAPADLPMRGSGRHPSPVNWVRTHPVAAACLATAVAHAMFLSTRLGDDEGGFLAVAQHWGVPGRYLYGP LWVDRPPGLIAVLALAAHLGPYGARIVALAVAVALVAAAGWAAAAVRRRASGWGAWTAFAFACSPLIGAQQLNGELVASA AVMTSVAATMHALYGAHRPRHSRALGLLAGGMALAAVLTKQNFLDALVFAAVLLTGTAVTSRRRRVDAVKVAGWFTLGAL TAAGTVLWWASAQHRLGAMLYAMYGFRADAAAVMASWSFHAPLTRLDNLAVAGVLCGLLVVMTVAFATNVRRLRRPDPLT LAIAAATVSALAGIAAGGNYWSHYLIALIPMTSLAAALTVTAPPMGPDGTAGSPVARQGHRILRVLVVVTVALTAGTAVV VAYRDVRAPSTVAATARWIADSARPGDTLTVAYTHANVLQASGLAPAYPYAWSLPLRTLDPNLVLLSDRLRAADGPTWFL QWDQEHAWGLDANGALDSALQQHYHVAAIICGHQVWLRDTAARVLARVPSPALCAR
Sequences:
>Translated_536_residues MTTELSRSDAVTAPADLPMRGSGRHPSPVNWVRTHPVAAACLATAVAHAMFLSTRLGDDEGGFLAVAQHWGVPGRYLYGP LWVDRPPGLIAVLALAAHLGPYGARIVALAVAVALVAAAGWAAAAVRRRASGWGAWTAFAFACSPLIGAQQLNGELVASA AVMTSVAATMHALYGAHRPRHSRALGLLAGGMALAAVLTKQNFLDALVFAAVLLTGTAVTSRRRRVDAVKVAGWFTLGAL TAAGTVLWWASAQHRLGAMLYAMYGFRADAAAVMASWSFHAPLTRLDNLAVAGVLCGLLVVMTVAFATNVRRLRRPDPLT LAIAAATVSALAGIAAGGNYWSHYLIALIPMTSLAAALTVTAPPMGPDGTAGSPVARQGHRILRVLVVVTVALTAGTAVV VAYRDVRAPSTVAATARWIADSARPGDTLTVAYTHANVLQASGLAPAYPYAWSLPLRTLDPNLVLLSDRLRAADGPTWFL QWDQEHAWGLDANGALDSALQQHYHVAAIICGHQVWLRDTAARVLARVPSPALCAR >Mature_535_residues TTELSRSDAVTAPADLPMRGSGRHPSPVNWVRTHPVAAACLATAVAHAMFLSTRLGDDEGGFLAVAQHWGVPGRYLYGPL WVDRPPGLIAVLALAAHLGPYGARIVALAVAVALVAAAGWAAAAVRRRASGWGAWTAFAFACSPLIGAQQLNGELVASAA VMTSVAATMHALYGAHRPRHSRALGLLAGGMALAAVLTKQNFLDALVFAAVLLTGTAVTSRRRRVDAVKVAGWFTLGALT AAGTVLWWASAQHRLGAMLYAMYGFRADAAAVMASWSFHAPLTRLDNLAVAGVLCGLLVVMTVAFATNVRRLRRPDPLTL AIAAATVSALAGIAAGGNYWSHYLIALIPMTSLAAALTVTAPPMGPDGTAGSPVARQGHRILRVLVVVTVALTAGTAVVV AYRDVRAPSTVAATARWIADSARPGDTLTVAYTHANVLQASGLAPAYPYAWSLPLRTLDPNLVLLSDRLRAADGPTWFLQ WDQEHAWGLDANGALDSALQQHYHVAAIICGHQVWLRDTAARVLARVPSPALCAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56121; Mature: 55989
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTELSRSDAVTAPADLPMRGSGRHPSPVNWVRTHPVAAACLATAVAHAMFLSTRLGDDE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC GGFLAVAQHWGVPGRYLYGPLWVDRPPGLIAVLALAAHLGPYGARIVALAVAVALVAAAG CCEEEEEECCCCCCCEEECCEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH WAAAAVRRRASGWGAWTAFAFACSPLIGAQQLNGELVASAAVMTSVAATMHALYGAHRPR HHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC HSRALGLLAGGMALAAVLTKQNFLDALVFAAVLLTGTAVTSRRRRVDAVKVAGWFTLGAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHH TAAGTVLWWASAQHRLGAMLYAMYGFRADAAAVMASWSFHAPLTRLDNLAVAGVLCGLLV HHHHHHEEECCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH VMTVAFATNVRRLRRPDPLTLAIAAATVSALAGIAAGGNYWSHYLIALIPMTSLAAALTV HHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEE TAPPMGPDGTAGSPVARQGHRILRVLVVVTVALTAGTAVVVAYRDVRAPSTVAATARWIA ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHH DSARPGDTLTVAYTHANVLQASGLAPAYPYAWSLPLRTLDPNLVLLSDRLRAADGPTWFL CCCCCCCEEEEEEEEHHHHHHCCCCCCCCCEEECCCEECCCCEEEEECCHHCCCCCEEEE QWDQEHAWGLDANGALDSALQQHYHVAAIICGHQVWLRDTAARVLARVPSPALCAR EECCCCCCCCCCCCHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHCCCCHHCCC >Mature Secondary Structure TTELSRSDAVTAPADLPMRGSGRHPSPVNWVRTHPVAAACLATAVAHAMFLSTRLGDDE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC GGFLAVAQHWGVPGRYLYGPLWVDRPPGLIAVLALAAHLGPYGARIVALAVAVALVAAAG CCEEEEEECCCCCCCEEECCEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH WAAAAVRRRASGWGAWTAFAFACSPLIGAQQLNGELVASAAVMTSVAATMHALYGAHRPR HHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC HSRALGLLAGGMALAAVLTKQNFLDALVFAAVLLTGTAVTSRRRRVDAVKVAGWFTLGAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHH TAAGTVLWWASAQHRLGAMLYAMYGFRADAAAVMASWSFHAPLTRLDNLAVAGVLCGLLV HHHHHHEEECCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH VMTVAFATNVRRLRRPDPLTLAIAAATVSALAGIAAGGNYWSHYLIALIPMTSLAAALTV HHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEE TAPPMGPDGTAGSPVARQGHRILRVLVVVTVALTAGTAVVVAYRDVRAPSTVAATARWIA ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHH DSARPGDTLTVAYTHANVLQASGLAPAYPYAWSLPLRTLDPNLVLLSDRLRAADGPTWFL CCCCCCCEEEEEEEEHHHHHHCCCCCCCCCEEECCCEECCCCEEEEECCHHCCCCCEEEE QWDQEHAWGLDANGALDSALQQHYHVAAIICGHQVWLRDTAARVLARVPSPALCAR EECCCCCCCCCCCCHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA