| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715837
Identifier: 119715837
GI number: 119715837
Start: 1699722
End: 1700594
Strand: Reverse
Name: 119715837
Synonym: Noca_1601
Alternate gene names: NA
Gene position: 1700594-1699722 (Counterclockwise)
Preceding gene: 119715838
Following gene: 119715833
Centisome position: 34.11
GC content: 66.55
Gene sequence:
>873_bases ATGACCGGGGCGGCGAGATTCACGCGGCACCGCGTCGTCGCCGGTTCAGGTGAGAGTCAGGTCGAGACCGTCATGGTTGC CCGCATGAGCACCGACACCGTCACTCGCCGTCTGGCGAACAAGGTCCCCGAGGTCATCTTCTGGTTCTGGGTCATCAAGA TCCTCTGCACCACAGTGGGAGAGAGCTTCGCCGACTACATCAACGAGACCCTCGGCTTCGGCCTGACCAACACCACGCTG CTCTTCGGCGCCGCCCTCGTCGTCGCGCTGGTCATCCAGTTCCGGCAGCCGCGCTACGTCCCCTGGATCTACTGGCTCAC TGTGGTGCTGATCAGCGTGGTGGGCACCTTGCTCACCGACAACCTCACCGACGCGCGCGGCGTACCTCTGTGGATCAGCT CGGTGACCTTCTCGGTCCTCCTCGCCGTCGTCTTCAGCCTCTGGTACGCCCGTGAGCGCACGCTGTCGATCCACTCGATC AACACCACCCAACGTGAGGCCTGGTACTGGCTGGTGGTGCTCGTGACCTTCGCCCTGGGCACCGCCGTCGGCGACTGGAC GCTGGACCTCACCGGCTGGGGCCCCGGCCCCTCGATCCTGCTCCCCGCGGGTCTCATCGCCGCCGTCTTCCTCGGGTGGC GAACCGGCCTGATGGGGCCGGTGCTGTCCTTCTGGCTGGCCTACATCCTCACCCGACCGCTGGGCGCCAACATCGGCGAC TTCCTGTCCGCTCCTCGCGCCGAGGGCGGGCTCGGCCTCGGCACGTTGTGGACCTCGGTGCTCTTCCTGGGCGCCATCAC GGCCACCGTGGTCTATCTGAGCATCACCAAGGTGGACCGCACCGAGGAAGAACCGCGGCTCATCGAGGCCTGA
Upstream 100 bases:
>100_bases ACTACCACGTCGCAGCCATCATCTGCGGTCACCAGGTCTGGCTTCGTGACACTGCCGCACGAGTCCTGGCCCGGGTTCCG AGTCCCGCGCTCTGCGCCCG
Downstream 100 bases:
>100_bases CCCACAACCTGGACAAGGAGAAACCCGTGAACGACACCCACCCCCATCGCGTCCTAATCGTCACCGACACGGCCGACCCC AACCCCGAGCTGCTCGAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MTGAARFTRHRVVAGSGESQVETVMVARMSTDTVTRRLANKVPEVIFWFWVIKILCTTVGESFADYINETLGFGLTNTTL LFGAALVVALVIQFRQPRYVPWIYWLTVVLISVVGTLLTDNLTDARGVPLWISSVTFSVLLAVVFSLWYARERTLSIHSI NTTQREAWYWLVVLVTFALGTAVGDWTLDLTGWGPGPSILLPAGLIAAVFLGWRTGLMGPVLSFWLAYILTRPLGANIGD FLSAPRAEGGLGLGTLWTSVLFLGAITATVVYLSITKVDRTEEEPRLIEA
Sequences:
>Translated_290_residues MTGAARFTRHRVVAGSGESQVETVMVARMSTDTVTRRLANKVPEVIFWFWVIKILCTTVGESFADYINETLGFGLTNTTL LFGAALVVALVIQFRQPRYVPWIYWLTVVLISVVGTLLTDNLTDARGVPLWISSVTFSVLLAVVFSLWYARERTLSIHSI NTTQREAWYWLVVLVTFALGTAVGDWTLDLTGWGPGPSILLPAGLIAAVFLGWRTGLMGPVLSFWLAYILTRPLGANIGD FLSAPRAEGGLGLGTLWTSVLFLGAITATVVYLSITKVDRTEEEPRLIEA >Mature_289_residues TGAARFTRHRVVAGSGESQVETVMVARMSTDTVTRRLANKVPEVIFWFWVIKILCTTVGESFADYINETLGFGLTNTTLL FGAALVVALVIQFRQPRYVPWIYWLTVVLISVVGTLLTDNLTDARGVPLWISSVTFSVLLAVVFSLWYARERTLSIHSIN TTQREAWYWLVVLVTFALGTAVGDWTLDLTGWGPGPSILLPAGLIAAVFLGWRTGLMGPVLSFWLAYILTRPLGANIGDF LSAPRAEGGLGLGTLWTSVLFLGAITATVVYLSITKVDRTEEEPRLIEA
Specific function: Unknown
COG id: COG4705
COG function: function code S; Uncharacterized membrane-anchored protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31873; Mature: 31741
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGAARFTRHRVVAGSGESQVETVMVARMSTDTVTRRLANKVPEVIFWFWVIKILCTTVG CCCCHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESFADYINETLGFGLTNTTLLFGAALVVALVIQFRQPRYVPWIYWLTVVLISVVGTLLTD HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC NLTDARGVPLWISSVTFSVLLAVVFSLWYARERTLSIHSINTTQREAWYWLVVLVTFALG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHH TAVGDWTLDLTGWGPGPSILLPAGLIAAVFLGWRTGLMGPVLSFWLAYILTRPLGANIGD HHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH FLSAPRAEGGLGLGTLWTSVLFLGAITATVVYLSITKVDRTEEEPRLIEA HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TGAARFTRHRVVAGSGESQVETVMVARMSTDTVTRRLANKVPEVIFWFWVIKILCTTVG CCCHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESFADYINETLGFGLTNTTLLFGAALVVALVIQFRQPRYVPWIYWLTVVLISVVGTLLTD HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC NLTDARGVPLWISSVTFSVLLAVVFSLWYARERTLSIHSINTTQREAWYWLVVLVTFALG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHH TAVGDWTLDLTGWGPGPSILLPAGLIAAVFLGWRTGLMGPVLSFWLAYILTRPLGANIGD HHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH FLSAPRAEGGLGLGTLWTSVLFLGAITATVVYLSITKVDRTEEEPRLIEA HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA