| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715806
Identifier: 119715806
GI number: 119715806
Start: 1663416
End: 1664789
Strand: Direct
Name: 119715806
Synonym: Noca_1570
Alternate gene names: NA
Gene position: 1663416-1664789 (Clockwise)
Preceding gene: 119715805
Following gene: 119715807
Centisome position: 33.36
GC content: 69.43
Gene sequence:
>1374_bases GTGATCACGAACCTCGTCCCGATGATCGACCTCAACCCGTTCCACTGGCTCGGGGACCAGGTCAAGGAGAGCCTGGCCGA CACGTTCACTTCGATGATGATGGCGCTCTGGTCGGCGGCACTGTGGCTGATGGATCTGGTGTTCAGCGTCCTCGACAGAT TCCTGACACCAGACGTCACCGACCCGGGCCTCAACCATCTGTACGGCGTGACCCTGTGGCTGTCGCTGGTCATGGCACTC GTCATCGGGTTCGGCCAGATCGGCCTGGCCGCCGTACGCCGCGACGGCCAGACCCTTGGCGCACTCGCGATGGGCATCGT CCAGTACGGAGCCGTCGTCGCCGGCTGGGTCGTAGTCTGCGGCGGCCTGATCGTCGGTTGCGCCGGACTGACCCGCGGGC TGCTCAGCACTTTGCTCGACGTACCAGGCTTCGCGGGCTACTCCGCCTCGGCCGGGCTGCCAAACCAGGTCGTCGGCACG GTCGAGGCCGCGGTGCTCGGCCTCTGCTCGCTGTTCCTCGTGATCCCCGCTGCGTTCGGCTATCTGCTCATCATGCTCGT GCGCGAGGCTGCACTGCTGATCCTTGTCGCCACCATGCCGGTCGCCGCGGCCGGGGCGCTGGGAGAAGGCACCCGAGCGT GGATGTGGAAGTCGATCAGGTGGTTCGTTGCCGCCTGCCTGACCTCGCCACTCCTGGCCCTGGTGGTCGGCCTCGGCGTC CAGATCTCGCGAGCCTCCTTCCCGGAGGCGAGTACGACGACCCAGGTTGGCTCGCTGGCAGGCGGCATCGTCAACGCCAA CGCGGCGAGCGTCGGGATGGCCGTCGTCGGCTGCTCGGTGTTCGCGATCGCCTGCTTCTGCCCGATGGTGCTCTTCCGAC TGCTGGCGTTCGTCGACCCGGGCACAGCGTCGGGCGCCTCGTTCCGGACCAACCTGGCCGCGAACGGCGGCATCTCCGGC CTGATCTCAGGGAGGCGCGCACAGGCCGACGGATCCGGCGCCGCGACCCAGGTCGACTCTGACGGCCGGGCGGCGAGTGA GACCGGTGCGGACGCCGAGACGGCCAACCGCTTCCAGTCCCGTGCGGCCAAGGCCTTCGGCGTCGCCGGCAAGGTGGTCG GCACTGGCATGGACGCGGTCGGGAAGGTCGCATCCACCGGCGCCTCGATGTCGGTCGACGTCATGGGCCAGGCGGGCGTC GGCCATCAGGGCTACTACGACACGACGCCTCCCCGGCGCACCGGCAAGCCACCACCGCAGCGGACACGCGTCGGCCGCGG ACACGACGAGGGCGGCGTCGCGAACGACCCGGCGCACATCGCCAACGCCGACGAAGCGGCCGCCGTGGCCGAGGACGGCG CGATGCTGGCATGA
Upstream 100 bases:
>100_bases GGGTCATCGCGGCGGGCGACGAGGCAGCAGCGACCCCGTCGCTGTGGCCGGGCTCCCAGGCCTCCTACGACGCCGGGTAT CAGTGGCTGGAGGTCGAGCC
Downstream 100 bases:
>100_bases CCGTCTACGGAGCTTCCACGAGCCGCGACAGGCAGGGCTGGTTCTTCGGCCTCACTGGCCCACAGGTCTTCCTCGTGCTC GCGGCCGCGTTCCCGTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 457; Mature: 457
Protein sequence:
>457_residues MITNLVPMIDLNPFHWLGDQVKESLADTFTSMMMALWSAALWLMDLVFSVLDRFLTPDVTDPGLNHLYGVTLWLSLVMAL VIGFGQIGLAAVRRDGQTLGALAMGIVQYGAVVAGWVVVCGGLIVGCAGLTRGLLSTLLDVPGFAGYSASAGLPNQVVGT VEAAVLGLCSLFLVIPAAFGYLLIMLVREAALLILVATMPVAAAGALGEGTRAWMWKSIRWFVAACLTSPLLALVVGLGV QISRASFPEASTTTQVGSLAGGIVNANAASVGMAVVGCSVFAIACFCPMVLFRLLAFVDPGTASGASFRTNLAANGGISG LISGRRAQADGSGAATQVDSDGRAASETGADAETANRFQSRAAKAFGVAGKVVGTGMDAVGKVASTGASMSVDVMGQAGV GHQGYYDTTPPRRTGKPPPQRTRVGRGHDEGGVANDPAHIANADEAAAVAEDGAMLA
Sequences:
>Translated_457_residues MITNLVPMIDLNPFHWLGDQVKESLADTFTSMMMALWSAALWLMDLVFSVLDRFLTPDVTDPGLNHLYGVTLWLSLVMAL VIGFGQIGLAAVRRDGQTLGALAMGIVQYGAVVAGWVVVCGGLIVGCAGLTRGLLSTLLDVPGFAGYSASAGLPNQVVGT VEAAVLGLCSLFLVIPAAFGYLLIMLVREAALLILVATMPVAAAGALGEGTRAWMWKSIRWFVAACLTSPLLALVVGLGV QISRASFPEASTTTQVGSLAGGIVNANAASVGMAVVGCSVFAIACFCPMVLFRLLAFVDPGTASGASFRTNLAANGGISG LISGRRAQADGSGAATQVDSDGRAASETGADAETANRFQSRAAKAFGVAGKVVGTGMDAVGKVASTGASMSVDVMGQAGV GHQGYYDTTPPRRTGKPPPQRTRVGRGHDEGGVANDPAHIANADEAAAVAEDGAMLA >Mature_457_residues MITNLVPMIDLNPFHWLGDQVKESLADTFTSMMMALWSAALWLMDLVFSVLDRFLTPDVTDPGLNHLYGVTLWLSLVMAL VIGFGQIGLAAVRRDGQTLGALAMGIVQYGAVVAGWVVVCGGLIVGCAGLTRGLLSTLLDVPGFAGYSASAGLPNQVVGT VEAAVLGLCSLFLVIPAAFGYLLIMLVREAALLILVATMPVAAAGALGEGTRAWMWKSIRWFVAACLTSPLLALVVGLGV QISRASFPEASTTTQVGSLAGGIVNANAASVGMAVVGCSVFAIACFCPMVLFRLLAFVDPGTASGASFRTNLAANGGISG LISGRRAQADGSGAATQVDSDGRAASETGADAETANRFQSRAAKAFGVAGKVVGTGMDAVGKVASTGASMSVDVMGQAGV GHQGYYDTTPPRRTGKPPPQRTRVGRGHDEGGVANDPAHIANADEAAAVAEDGAMLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46633; Mature: 46633
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITNLVPMIDLNPFHWLGDQVKESLADTFTSMMMALWSAALWLMDLVFSVLDRFLTPDVT CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DPGLNHLYGVTLWLSLVMALVIGFGQIGLAAVRRDGQTLGALAMGIVQYGAVVAGWVVVC CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH GGLIVGCAGLTRGLLSTLLDVPGFAGYSASAGLPNQVVGTVEAAVLGLCSLFLVIPAAFG HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH YLLIMLVREAALLILVATMPVAAAGALGEGTRAWMWKSIRWFVAACLTSPLLALVVGLGV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC QISRASFPEASTTTQVGSLAGGIVNANAASVGMAVVGCSVFAIACFCPMVLFRLLAFVDP EEECCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GTASGASFRTNLAANGGISGLISGRRAQADGSGAATQVDSDGRAASETGADAETANRFQS CCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHH RAAKAFGVAGKVVGTGMDAVGKVASTGASMSVDVMGQAGVGHQGYYDTTPPRRTGKPPPQ HHHHHHCCHHHHHHCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCH RTRVGRGHDEGGVANDPAHIANADEAAAVAEDGAMLA HCCCCCCCCCCCCCCCCHHHCCCHHHHHHHCCCCCCC >Mature Secondary Structure MITNLVPMIDLNPFHWLGDQVKESLADTFTSMMMALWSAALWLMDLVFSVLDRFLTPDVT CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DPGLNHLYGVTLWLSLVMALVIGFGQIGLAAVRRDGQTLGALAMGIVQYGAVVAGWVVVC CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH GGLIVGCAGLTRGLLSTLLDVPGFAGYSASAGLPNQVVGTVEAAVLGLCSLFLVIPAAFG HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH YLLIMLVREAALLILVATMPVAAAGALGEGTRAWMWKSIRWFVAACLTSPLLALVVGLGV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC QISRASFPEASTTTQVGSLAGGIVNANAASVGMAVVGCSVFAIACFCPMVLFRLLAFVDP EEECCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GTASGASFRTNLAANGGISGLISGRRAQADGSGAATQVDSDGRAASETGADAETANRFQS CCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHH RAAKAFGVAGKVVGTGMDAVGKVASTGASMSVDVMGQAGVGHQGYYDTTPPRRTGKPPPQ HHHHHHCCHHHHHHCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCH RTRVGRGHDEGGVANDPAHIANADEAAAVAEDGAMLA HCCCCCCCCCCCCCCCCHHHCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA