| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715805
Identifier: 119715805
GI number: 119715805
Start: 1662640
End: 1663419
Strand: Direct
Name: 119715805
Synonym: Noca_1569
Alternate gene names: NA
Gene position: 1662640-1663419 (Clockwise)
Preceding gene: 119715804
Following gene: 119715806
Centisome position: 33.35
GC content: 70.0
Gene sequence:
>780_bases ATGTCCGCGCGCAACGCAGCTGCACGGATGCTGTCCGGGCCGGACGAGTGGAACCGGCGGCGCCTACAGGTCCTTCTCGT CGTCGCGGTGAGCATCATGGCCGCGGTCGTCGGCGGGATCGTTTGGTCAATCATCGAGCTGCTCCACGGCGACCAAGGCT CGACGCAAGCCGAGACTGCTGAGCGCGCACCCGCAGATCAAGCCTGGGGCGATACGTCGCTGGATGGTGCGCAGCCGGGC ACGCTGTCGAGGGGATCGACCGGCGTCATCCACATCCCGCAGCCCCGCTCCCTCGGAGAGGCGCAGGTCGGCACGACGTT CCCGAGGTCGCCGGAGGGTGCACTGGCGCAGTTGATCGCGATCGACCGCCGAGCGATCGAGTCCGGATCTGTCGTGACGG CGCAGGACGTCATCTCAGCCTGGGCGGCTCCCGGAGGCCCGACCCCAGACTCGTGGTCGGGTGTCGCCGCGGTCCAGTCG TTGCTCGAGTCCGCCGGCCTCCCCGCGAATGGGTCGACCGAGCTGGCCATCCAGCTCGAACCGGCCATGGGCCTGGTCCA GGACGAAACGCCGACCGTCTGCGTCGACTTCATCCTCACTGTCACGGTGCGAGGCGGGCAGCCGGCCCGGATCGCGGCGG CCGACTGCCAGCACATGACCTGGATGGGCGACCGGTGGGTCATCGCGGCGGGCGACGAGGCAGCAGCGACCCCGTCGCTG TGGCCGGGCTCCCAGGCCTCCTACGACGCCGGGTATCAGTGGCTGGAGGTCGAGCCGTGA
Upstream 100 bases:
>100_bases CCGCCCAACTGGGCGCGTCCGGCCTCATCTACTCCGTCCTGGCTGCCGTCGGCTACGTGACGATCTACGGCATCCTCAAC GCGATCGTCGGGAACTGCTG
Downstream 100 bases:
>100_bases TCACGAACCTCGTCCCGATGATCGACCTCAACCCGTTCCACTGGCTCGGGGACCAGGTCAAGGAGAGCCTGGCCGACACG TTCACTTCGATGATGATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MSARNAAARMLSGPDEWNRRRLQVLLVVAVSIMAAVVGGIVWSIIELLHGDQGSTQAETAERAPADQAWGDTSLDGAQPG TLSRGSTGVIHIPQPRSLGEAQVGTTFPRSPEGALAQLIAIDRRAIESGSVVTAQDVISAWAAPGGPTPDSWSGVAAVQS LLESAGLPANGSTELAIQLEPAMGLVQDETPTVCVDFILTVTVRGGQPARIAAADCQHMTWMGDRWVIAAGDEAAATPSL WPGSQASYDAGYQWLEVEP
Sequences:
>Translated_259_residues MSARNAAARMLSGPDEWNRRRLQVLLVVAVSIMAAVVGGIVWSIIELLHGDQGSTQAETAERAPADQAWGDTSLDGAQPG TLSRGSTGVIHIPQPRSLGEAQVGTTFPRSPEGALAQLIAIDRRAIESGSVVTAQDVISAWAAPGGPTPDSWSGVAAVQS LLESAGLPANGSTELAIQLEPAMGLVQDETPTVCVDFILTVTVRGGQPARIAAADCQHMTWMGDRWVIAAGDEAAATPSL WPGSQASYDAGYQWLEVEP >Mature_258_residues SARNAAARMLSGPDEWNRRRLQVLLVVAVSIMAAVVGGIVWSIIELLHGDQGSTQAETAERAPADQAWGDTSLDGAQPGT LSRGSTGVIHIPQPRSLGEAQVGTTFPRSPEGALAQLIAIDRRAIESGSVVTAQDVISAWAAPGGPTPDSWSGVAAVQSL LESAGLPANGSTELAIQLEPAMGLVQDETPTVCVDFILTVTVRGGQPARIAAADCQHMTWMGDRWVIAAGDEAAATPSLW PGSQASYDAGYQWLEVEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27000; Mature: 26868
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARNAAARMLSGPDEWNRRRLQVLLVVAVSIMAAVVGGIVWSIIELLHGDQGSTQAETA CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH ERAPADQAWGDTSLDGAQPGTLSRGSTGVIHIPQPRSLGEAQVGTTFPRSPEGALAQLIA HCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHH IDRRAIESGSVVTAQDVISAWAAPGGPTPDSWSGVAAVQSLLESAGLPANGSTELAIQLE HHHHHHCCCCEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEC PAMGLVQDETPTVCVDFILTVTVRGGQPARIAAADCQHMTWMGDRWVIAAGDEAAATPSL CCCCCCCCCCCHHHEEEEEEEEECCCCCCEEEHHCCCHHEECCCEEEEEECCCCCCCCCC WPGSQASYDAGYQWLEVEP CCCCCCCCCCCCEEEEECC >Mature Secondary Structure SARNAAARMLSGPDEWNRRRLQVLLVVAVSIMAAVVGGIVWSIIELLHGDQGSTQAETA CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH ERAPADQAWGDTSLDGAQPGTLSRGSTGVIHIPQPRSLGEAQVGTTFPRSPEGALAQLIA HCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHH IDRRAIESGSVVTAQDVISAWAAPGGPTPDSWSGVAAVQSLLESAGLPANGSTELAIQLE HHHHHHCCCCEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEC PAMGLVQDETPTVCVDFILTVTVRGGQPARIAAADCQHMTWMGDRWVIAAGDEAAATPSL CCCCCCCCCCCHHHEEEEEEEEECCCCCCEEEHHCCCHHEECCCEEEEEECCCCCCCCCC WPGSQASYDAGYQWLEVEP CCCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA