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The map label for this gene is dedA [C]

Identifier: 119715790

GI number: 119715790

Start: 1646823

End: 1647563

Strand: Direct

Name: dedA [C]

Synonym: Noca_1554

Alternate gene names: 119715790

Gene position: 1646823-1647563 (Clockwise)

Preceding gene: 119715789

Following gene: 119715791

Centisome position: 33.03

GC content: 71.79

Gene sequence:

>741_bases
GTGATGACCGGCCTGATCGAGCACCTGCTAGCGACCCCGGCATGGGTGGCGCTGCTGGTGGTGTTCGCACTGCCCGCCCT
GGAGTCCTCGGCCTTCCTCGGGTTCGTCTTCCCCGGAGAGCTGGCGGTCCTCCTCGGTGGCGTCGTGGCCAGCCAGGGTC
ACGTCCCGCTGGGCGGCGTGCTGGCGGCCGGCGTCGGTGGCGCGATCGCCGGGGATGCGGTCGGCTACCTCGTCGGGCGC
CGCTGGGGTCGACGGATCCTCGACTCCACCCTGGGCCGGTTCGTCAAGGTCGAGCATCTGGATCGCGCAGAGGTCGCCCT
GGCACGGCGCGGCGGCTGGGCGGTCTTCTTGGGCCGGTTCACCGTCGCGTTGCGCGTGATGATTCCTGGCCTGGCCGGCA
TGGCGGGTATGCCGTATCGACGCTTCGCGCTCGCCAACGTCACCGGCGGCGCATTGTGGGGCGCGACCGTGGCGCTCGCC
GGGTACCTGGCCGGGAGCAGTTGGCACGTGGTCGAGCACGACATGTCGGTTGCCGGCATCGGCGTCACCCTCGGGGTGAT
TGCGTTGCTGCTCATCGCCCACGCGATCGGCCGTCGCAGGGCTAGGACCCGCACCGCCACAAGCAATCCCGAGAGCATCG
GCGGCAGCGACGGATCGGGGCGCCGCCGGAACGGTGATGCGGGGCTCGGCGGACACGGCACGCGGGGCGGCGCAGCGTCG
GCCGATTCCCCGTTGGTGTGA

Upstream 100 bases:

>100_bases
TGGTGTCGTTCCTCCTTGCCCGGTCGCTGATCGTGCGGCTGGTCGAGCTCCTGGCGCGAACCCCCGCGCGTGCCTTGCTG
ACCACCGGCTCGCGGGCGAC

Downstream 100 bases:

>100_bases
GCGGTGGCGGGTCGCACGGGACGGGACCGCGCCGTTCGTGACCGCGCGGTCGGCTCCGCGGCGATCCGGCAGTAAGGCGG
CGGGACTTGCAGGCCAAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MMTGLIEHLLATPAWVALLVVFALPALESSAFLGFVFPGELAVLLGGVVASQGHVPLGGVLAAGVGGAIAGDAVGYLVGR
RWGRRILDSTLGRFVKVEHLDRAEVALARRGGWAVFLGRFTVALRVMIPGLAGMAGMPYRRFALANVTGGALWGATVALA
GYLAGSSWHVVEHDMSVAGIGVTLGVIALLLIAHAIGRRRARTRTATSNPESIGGSDGSGRRRNGDAGLGGHGTRGGAAS
ADSPLV

Sequences:

>Translated_246_residues
MMTGLIEHLLATPAWVALLVVFALPALESSAFLGFVFPGELAVLLGGVVASQGHVPLGGVLAAGVGGAIAGDAVGYLVGR
RWGRRILDSTLGRFVKVEHLDRAEVALARRGGWAVFLGRFTVALRVMIPGLAGMAGMPYRRFALANVTGGALWGATVALA
GYLAGSSWHVVEHDMSVAGIGVTLGVIALLLIAHAIGRRRARTRTATSNPESIGGSDGSGRRRNGDAGLGGHGTRGGAAS
ADSPLV
>Mature_246_residues
MMTGLIEHLLATPAWVALLVVFALPALESSAFLGFVFPGELAVLLGGVVASQGHVPLGGVLAAGVGGAIAGDAVGYLVGR
RWGRRILDSTLGRFVKVEHLDRAEVALARRGGWAVFLGRFTVALRVMIPGLAGMAGMPYRRFALANVTGGALWGATVALA
GYLAGSSWHVVEHDMSVAGIGVTLGVIALLLIAHAIGRRRARTRTATSNPESIGGSDGSGRRRNGDAGLGGHGTRGGAAS
ADSPLV

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=153, Percent_Identity=30.0653594771242, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1786252, Length=168, Percent_Identity=28.5714285714286, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1789384, Length=172, Percent_Identity=28.4883720930233, Blast_Score=62, Evalue=5e-11,
Organism=Escherichia coli, GI87082056, Length=131, Percent_Identity=37.4045801526718, Blast_Score=60, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 25103; Mature: 25103

Theoretical pI: Translated: 11.75; Mature: 11.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTGLIEHLLATPAWVALLVVFALPALESSAFLGFVFPGELAVLLGGVVASQGHVPLGGV
CHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHCCCCCCHHHH
LAAGVGGAIAGDAVGYLVGRRWGRRILDSTLGRFVKVEHLDRAEVALARRGGWAVFLGRF
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHCCHHHHHHHHCCCCEEHHHHH
TVALRVMIPGLAGMAGMPYRRFALANVTGGALWGATVALAGYLAGSSWHVVEHDMSVAGI
HHHHHHHHCCHHCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHH
GVTLGVIALLLIAHAIGRRRARTRTATSNPESIGGSDGSGRRRNGDAGLGGHGTRGGAAS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ADSPLV
CCCCCC
>Mature Secondary Structure
MMTGLIEHLLATPAWVALLVVFALPALESSAFLGFVFPGELAVLLGGVVASQGHVPLGGV
CHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHCCCCCCHHHH
LAAGVGGAIAGDAVGYLVGRRWGRRILDSTLGRFVKVEHLDRAEVALARRGGWAVFLGRF
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHCCHHHHHHHHCCCCEEHHHHH
TVALRVMIPGLAGMAGMPYRRFALANVTGGALWGATVALAGYLAGSSWHVVEHDMSVAGI
HHHHHHHHCCHHCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHH
GVTLGVIALLLIAHAIGRRRARTRTATSNPESIGGSDGSGRRRNGDAGLGGHGTRGGAAS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ADSPLV
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]