Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

Click here to switch to the map view.

The map label for this gene is 119715772

Identifier: 119715772

GI number: 119715772

Start: 1630819

End: 1631049

Strand: Direct

Name: 119715772

Synonym: Noca_1536

Alternate gene names: NA

Gene position: 1630819-1631049 (Clockwise)

Preceding gene: 119715771

Following gene: 119715773

Centisome position: 32.71

GC content: 65.37

Gene sequence:

>231_bases
ATGGAGATGGAGAACGTCCTGCTGAAGATCACCGACGTCATGGAGCGCCTGTCTGTCGGGCAGACGAAGGTGTACGAGCT
GATGTCCAGCGGTGAGCTGCGGTCGGTGAAGGTCGGCCGCGCCCGTCGCGTGCCGAGCGACGAGCTCGAGCGCTTCATGG
CCGAACTCGATGACACTCGCCCCAACCTCCGCCTCCCGATGCCGAGAGGCTCCACAGCCCGCGCTTCCTGA

Upstream 100 bases:

>100_bases
GGCGGTTGAGAGTCCGAGGCGTGTCGCCGACGGGGCTGTCCACGACTCGTGTCCACTCGGCTCCGTCGACGCGCTTGAAG
GAGGTCCCGGAGCCGAGGAG

Downstream 100 bases:

>100_bases
CGCTTCGTCCACAGGTGAAGGCTGAGCGGGTGCCGCGGGCGGTCTCGGAGATCACGCTGAGTTCCGTGTCCATTCGCGCA
CCTTCGTGCGCTTGAAGAGT

Product: DNA binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MEMENVLLKITDVMERLSVGQTKVYELMSSGELRSVKVGRARRVPSDELERFMAELDDTRPNLRLPMPRGSTARAS

Sequences:

>Translated_76_residues
MEMENVLLKITDVMERLSVGQTKVYELMSSGELRSVKVGRARRVPSDELERFMAELDDTRPNLRLPMPRGSTARAS
>Mature_76_residues
MEMENVLLKITDVMERLSVGQTKVYELMSSGELRSVKVGRARRVPSDELERFMAELDDTRPNLRLPMPRGSTARAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8652; Mature: 8652

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.9 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.9 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMENVLLKITDVMERLSVGQTKVYELMSSGELRSVKVGRARRVPSDELERFMAELDDTR
CCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHCCCC
PNLRLPMPRGSTARAS
CCEEECCCCCCCCCCC
>Mature Secondary Structure
MEMENVLLKITDVMERLSVGQTKVYELMSSGELRSVKVGRARRVPSDELERFMAELDDTR
CCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHCCCC
PNLRLPMPRGSTARAS
CCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA