| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715771
Identifier: 119715771
GI number: 119715771
Start: 1629684
End: 1630727
Strand: Direct
Name: 119715771
Synonym: Noca_1535
Alternate gene names: NA
Gene position: 1629684-1630727 (Clockwise)
Preceding gene: 119715766
Following gene: 119715772
Centisome position: 32.69
GC content: 68.49
Gene sequence:
>1044_bases ATGCGTGCCCCACGCCGCCGAACCCGCCTCATCGGCTTGGCGGTCGTCGCCCTGCTCGTCACGCTCGCGGGAGGCGGTCT CGCCATCTGGTGGAAGCAGCGCGGGCCCTCCACCCTGGACCTACCGATCACCCAGGCCCGAGTGATACCGCTGACCGGCG ACAGCTCACGCTTCGACTACGAGGACCTCGACGCCGAACGAGGGCTGTTGTTCATCGCCCACATGGGAGCAGGTCAGGTC ATCGAGGTCGACGTACGCACAGGCAAGGTCGTGCGCACCATCGACGGGCTCGACGACGTCCACGGCGTGATCGTCGTGCC GCAGCTTCAGCGGGTCTTCGCCACGGCCACCGGGACCAACGAGCTCGTCTCGCTCGACGAGGACACCGGCCGTGAACGCG GGCGTGCGCCGACCGACGCGTACCCCGACGGCCTGGCCTACAACCCGGACACGAACACCGTCTGGACCACCAACGAGGAC GCCGGCACCGAGACCGTCGTGGATGCCAAGACCCTCGACGTGCGCGGCAGCGTCGAACTCGGCGACAGCGTCGGCAACGT CGCCTACGACCCCGGCAGCCACACCATGATGGTCGGCGTCCAGTCCGACAACGTCCTCGCCGTCATCGACCCCAGCACCC TGCGCGTCGAACGACGCGTCGACCTGCCCGGCTGCGACACCAGCCACAGCCTGCGCATCGACGCCGTCCGGCGCCTCGCG TTCGTCGGATGCGAGGACAACGACCGCCTGCTCACATTGGACCTGAACAGCTGGATGATCACCGGCAACGAGGAGGTCGG CGATTTCCCTGACGTGCTGAGCTACGACCAGGCAGACGGGCGACTCTGGGGTGCTGCCGAGAGCGGCTGGGTAACGATCC TCGAACTCGACGGCCGTGCAATCCAGGTCGTCGGCCGCGACTTCCTGACCGACGGCGCACACGTCGTCGCCGTCGACCCG ACCAACCACCACGCATACCTCCCCGTCCCTGATGGCGGCGACCGACAGCCCGCGGTGCTCGACGAAGCGCCCGACGGCGG TTGA
Upstream 100 bases:
>100_bases GGCAGTGCATAGGTGAGGAACACCCACTCGCCGACCTTGCCCGAACCAGTCACACGGGTACTGTAACCATGGTTACAAAC CATTCCCGGAAGGTCTCACG
Downstream 100 bases:
>100_bases GAGTCCGAGGCGTGTCGCCGACGGGGCTGTCCACGACTCGTGTCCACTCGGCTCCGTCGACGCGCTTGAAGGAGGTCCCG GAGCCGAGGAGATGGAGATG
Product: putative surface antigen protein
Products: NA
Alternate protein names: Surface Antigen Protein; 40-Residue YVTN Family Beta-Propeller Repeat Protein; YVTN Family Beta-Propeller Repeat Protein
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MRAPRRRTRLIGLAVVALLVTLAGGGLAIWWKQRGPSTLDLPITQARVIPLTGDSSRFDYEDLDAERGLLFIAHMGAGQV IEVDVRTGKVVRTIDGLDDVHGVIVVPQLQRVFATATGTNELVSLDEDTGRERGRAPTDAYPDGLAYNPDTNTVWTTNED AGTETVVDAKTLDVRGSVELGDSVGNVAYDPGSHTMMVGVQSDNVLAVIDPSTLRVERRVDLPGCDTSHSLRIDAVRRLA FVGCEDNDRLLTLDLNSWMITGNEEVGDFPDVLSYDQADGRLWGAAESGWVTILELDGRAIQVVGRDFLTDGAHVVAVDP TNHHAYLPVPDGGDRQPAVLDEAPDGG
Sequences:
>Translated_347_residues MRAPRRRTRLIGLAVVALLVTLAGGGLAIWWKQRGPSTLDLPITQARVIPLTGDSSRFDYEDLDAERGLLFIAHMGAGQV IEVDVRTGKVVRTIDGLDDVHGVIVVPQLQRVFATATGTNELVSLDEDTGRERGRAPTDAYPDGLAYNPDTNTVWTTNED AGTETVVDAKTLDVRGSVELGDSVGNVAYDPGSHTMMVGVQSDNVLAVIDPSTLRVERRVDLPGCDTSHSLRIDAVRRLA FVGCEDNDRLLTLDLNSWMITGNEEVGDFPDVLSYDQADGRLWGAAESGWVTILELDGRAIQVVGRDFLTDGAHVVAVDP TNHHAYLPVPDGGDRQPAVLDEAPDGG >Mature_347_residues MRAPRRRTRLIGLAVVALLVTLAGGGLAIWWKQRGPSTLDLPITQARVIPLTGDSSRFDYEDLDAERGLLFIAHMGAGQV IEVDVRTGKVVRTIDGLDDVHGVIVVPQLQRVFATATGTNELVSLDEDTGRERGRAPTDAYPDGLAYNPDTNTVWTTNED AGTETVVDAKTLDVRGSVELGDSVGNVAYDPGSHTMMVGVQSDNVLAVIDPSTLRVERRVDLPGCDTSHSLRIDAVRRLA FVGCEDNDRLLTLDLNSWMITGNEEVGDFPDVLSYDQADGRLWGAAESGWVTILELDGRAIQVVGRDFLTDGAHVVAVDP TNHHAYLPVPDGGDRQPAVLDEAPDGG
Specific function: Unknown
COG id: COG3391
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37382; Mature: 37382
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAPRRRTRLIGLAVVALLVTLAGGGLAIWWKQRGPSTLDLPITQARVIPLTGDSSRFDY CCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCCEEEEEECCCCCCCCH EDLDAERGLLFIAHMGAGQVIEVDVRTGKVVRTIDGLDDVHGVIVVPQLQRVFATATGTN HHCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCCCCEEEEECHHEEEEECCCCC ELVSLDEDTGRERGRAPTDAYPDGLAYNPDTNTVWTTNEDAGTETVVDAKTLDVRGSVEL CEEECCCCCCHHCCCCCCCCCCCCEEECCCCCEEEECCCCCCCEEEEEEEEEEEECCEEE GDSVGNVAYDPGSHTMMVGVQSDNVLAVIDPSTLRVERRVDLPGCDTSHSLRIDAVRRLA CCCCCCEEECCCCCEEEEEECCCCEEEEECCCCEEEEEEECCCCCCCCCCEEHHEEEEEE FVGCEDNDRLLTLDLNSWMITGNEEVGDFPDVLSYDQADGRLWGAAESGWVTILELDGRA EECCCCCCEEEEEECCCEEEECCCCCCCCCHHHCCCCCCCEEEECCCCCEEEEEEECCCE IQVVGRDFLTDGAHVVAVDPTNHHAYLPVPDGGDRQPAVLDEAPDGG EEEECHHHHCCCCEEEEECCCCCEEEEECCCCCCCCCCEECCCCCCC >Mature Secondary Structure MRAPRRRTRLIGLAVVALLVTLAGGGLAIWWKQRGPSTLDLPITQARVIPLTGDSSRFDY CCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCCEEEEEECCCCCCCCH EDLDAERGLLFIAHMGAGQVIEVDVRTGKVVRTIDGLDDVHGVIVVPQLQRVFATATGTN HHCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCCCCEEEEECHHEEEEECCCCC ELVSLDEDTGRERGRAPTDAYPDGLAYNPDTNTVWTTNEDAGTETVVDAKTLDVRGSVEL CEEECCCCCCHHCCCCCCCCCCCCEEECCCCCEEEECCCCCCCEEEEEEEEEEEECCEEE GDSVGNVAYDPGSHTMMVGVQSDNVLAVIDPSTLRVERRVDLPGCDTSHSLRIDAVRRLA CCCCCCEEECCCCCEEEEEECCCCEEEEECCCCEEEEEEECCCCCCCCCCEEHHEEEEEE FVGCEDNDRLLTLDLNSWMITGNEEVGDFPDVLSYDQADGRLWGAAESGWVTILELDGRA EECCCCCCEEEEEECCCEEEECCCCCCCCCHHHCCCCCCCEEEECCCCCEEEEEEECCCE IQVVGRDFLTDGAHVVAVDPTNHHAYLPVPDGGDRQPAVLDEAPDGG EEEECHHHHCCCCEEEEECCCCCEEEEECCCCCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA