Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119715767

Identifier: 119715767

GI number: 119715767

Start: 1626088

End: 1627305

Strand: Reverse

Name: 119715767

Synonym: Noca_1531

Alternate gene names: NA

Gene position: 1627305-1626088 (Counterclockwise)

Preceding gene: 119715768

Following gene: 119715761

Centisome position: 32.64

GC content: 71.35

Gene sequence:

>1218_bases
GTGCGCAGGGTCAGCGTCGACGCGCAGCGGATAGTCGCCGCACAGGCCCTGCGCGCCGCCGGCTATGGCTGCACCGCCGT
CCTGCTCGGCAGCCTGCTCGCAGCCCGCCACTATTCGCCGCTGACCACCGGGCTCGTCCTCGCGAGCGTCGTCGCGGGCA
CGGCCTGGGGATCCCTCCTGTTGGGCCGCGTTGCCGACCGGGTGGGTCGGCGGCGCTGGTACGCCGCCATCTACCTCGGC
GTCGCTCTCGCCGGGTTGGTGATGGCGTTCGGGCCGCCGCTGTGGCTGATCGTCATCCTCGCGTTAGCCGGCGGGCTGTC
CACCGACGTCGTCGACAACGGACCGGCGACCACGCTGGAGCAGGTGATGCTCGCCGGTGAAGACTCCGCAGCGGCCGGCC
GTTCCGGAGCACGTGTTTACGGGCTCTACAACGCCGTTGCCTCGATCGCGGGTGCCCTCGGCGCCCTCGCCGCCGGGCTT
CCCACCAGGGTCGGGTTCGACCCGGCGGATCCAAAGCCGTTCGCGGTGCTCGTACCCCTCGGCCTCCTCGGGCTAGGCCT
CGCGCTCGGCCTCAGCCCCCACGTCGAAGCCGAGCCGCGCAGCATCTTCGCATCCGACGAGTTGTCGGACGGTCGACGCA
AGGTGCGACAGCTGGCGGCCCTGTTCGCAGTCGATGCCGGTGGCGGTGGCCTGGTCACCACCAGCTTCCTGGCCTACTAC
CTCGCGCTGCGCTACGACGCCTCACCCTCGACTCTCGGCGTCCTGTTCTTCGCCACCTCCCTGCTCCAGGCCGCCTCCGT
CTGGGTCGCGCCGCGACTGGCGGACCGGATCGGCCTGGTCCCGACGATGGTCTTCACGCACCTGCCCAGCAACATGCTGC
TCGCGGCGATCGCGTTCGCCCCCACGCTGCCGGTCGCGATCATCCTCGTGCTGGCCCGAACTGCGCTGTCGCAGATGGAC
GTGCCGACCCGGCAGGCACTCGTGATGAGTGTCGTCGACCCCAGCGAAAGGACTGCCGCAGCCGCGGTCACCAACGCCGC
CCGCTACACGGTTCGGCCCGCCGGACCGCTGCTCGGCGGTGCCCTGCAGGGCGTTGCCCTCGGCCTGCCGCTGGTCGTCG
CCGGCACCGTCAAGGGCGGCTACGACCTAGCGCTGTGGGGCTGGGCCCAGCACGCGAAGGTGACGAGTCCCAGCGCTCCA
CCGGAATCAGCTGCCTGA

Upstream 100 bases:

>100_bases
ATCGTGCTGATCTTCAAGCTCGGCTGGTCGACCATGCGCACCCTCGGCGTGTGCGCCGTCCTCGGCCTGATCGCGACCCT
GGCGTTCTGAGGCGTCGGCG

Downstream 100 bases:

>100_bases
ACTCCACAAACTGACCAAGCGAAATGGCCCTGACATGCGACGCGGACTGGTTGCGATTTCTACCGCATCCCATGCTGGTG
CTCGCCGGCTGCTCCTGAGC

Product: major facilitator transporter

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Transporter Protein; Transporter Facilitator Family; Multidrug Efflux Permease; ABC Transporter Permease Protein; Sugar Transporter Related Protein; Transport Transmembrane Protein

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MRRVSVDAQRIVAAQALRAAGYGCTAVLLGSLLAARHYSPLTTGLVLASVVAGTAWGSLLLGRVADRVGRRRWYAAIYLG
VALAGLVMAFGPPLWLIVILALAGGLSTDVVDNGPATTLEQVMLAGEDSAAAGRSGARVYGLYNAVASIAGALGALAAGL
PTRVGFDPADPKPFAVLVPLGLLGLGLALGLSPHVEAEPRSIFASDELSDGRRKVRQLAALFAVDAGGGGLVTTSFLAYY
LALRYDASPSTLGVLFFATSLLQAASVWVAPRLADRIGLVPTMVFTHLPSNMLLAAIAFAPTLPVAIILVLARTALSQMD
VPTRQALVMSVVDPSERTAAAAVTNAARYTVRPAGPLLGGALQGVALGLPLVVAGTVKGGYDLALWGWAQHAKVTSPSAP
PESAA

Sequences:

>Translated_405_residues
MRRVSVDAQRIVAAQALRAAGYGCTAVLLGSLLAARHYSPLTTGLVLASVVAGTAWGSLLLGRVADRVGRRRWYAAIYLG
VALAGLVMAFGPPLWLIVILALAGGLSTDVVDNGPATTLEQVMLAGEDSAAAGRSGARVYGLYNAVASIAGALGALAAGL
PTRVGFDPADPKPFAVLVPLGLLGLGLALGLSPHVEAEPRSIFASDELSDGRRKVRQLAALFAVDAGGGGLVTTSFLAYY
LALRYDASPSTLGVLFFATSLLQAASVWVAPRLADRIGLVPTMVFTHLPSNMLLAAIAFAPTLPVAIILVLARTALSQMD
VPTRQALVMSVVDPSERTAAAAVTNAARYTVRPAGPLLGGALQGVALGLPLVVAGTVKGGYDLALWGWAQHAKVTSPSAP
PESAA
>Mature_405_residues
MRRVSVDAQRIVAAQALRAAGYGCTAVLLGSLLAARHYSPLTTGLVLASVVAGTAWGSLLLGRVADRVGRRRWYAAIYLG
VALAGLVMAFGPPLWLIVILALAGGLSTDVVDNGPATTLEQVMLAGEDSAAAGRSGARVYGLYNAVASIAGALGALAAGL
PTRVGFDPADPKPFAVLVPLGLLGLGLALGLSPHVEAEPRSIFASDELSDGRRKVRQLAALFAVDAGGGGLVTTSFLAYY
LALRYDASPSTLGVLFFATSLLQAASVWVAPRLADRIGLVPTMVFTHLPSNMLLAAIAFAPTLPVAIILVLARTALSQMD
VPTRQALVMSVVDPSERTAAAAVTNAARYTVRPAGPLLGGALQGVALGLPLVVAGTVKGGYDLALWGWAQHAKVTSPSAP
PESAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6322584, Length=424, Percent_Identity=27.122641509434, Blast_Score=114, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41426; Mature: 41426

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRVSVDAQRIVAAQALRAAGYGCTAVLLGSLLAARHYSPLTTGLVLASVVAGTAWGSLL
CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LGRVADRVGRRRWYAAIYLGVALAGLVMAFGPPLWLIVILALAGGLSTDVVDNGPATTLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHH
QVMLAGEDSAAAGRSGARVYGLYNAVASIAGALGALAAGLPTRVGFDPADPKPFAVLVPL
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHH
GLLGLGLALGLSPHVEAEPRSIFASDELSDGRRKVRQLAALFAVDAGGGGLVTTSFLAYY
HHHHHHHHHCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHH
LALRYDASPSTLGVLFFATSLLQAASVWVAPRLADRIGLVPTMVFTHLPSNMLLAAIAFA
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
PTLPVAIILVLARTALSQMDVPTRQALVMSVVDPSERTAAAAVTNAARYTVRPAGPLLGG
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHEEECCCCCHHHH
ALQGVALGLPLVVAGTVKGGYDLALWGWAQHAKVTSPSAPPESAA
HHHHHHHCCCEEEEEECCCCCEEEEECCHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRRVSVDAQRIVAAQALRAAGYGCTAVLLGSLLAARHYSPLTTGLVLASVVAGTAWGSLL
CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LGRVADRVGRRRWYAAIYLGVALAGLVMAFGPPLWLIVILALAGGLSTDVVDNGPATTLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHH
QVMLAGEDSAAAGRSGARVYGLYNAVASIAGALGALAAGLPTRVGFDPADPKPFAVLVPL
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHH
GLLGLGLALGLSPHVEAEPRSIFASDELSDGRRKVRQLAALFAVDAGGGGLVTTSFLAYY
HHHHHHHHHCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHH
LALRYDASPSTLGVLFFATSLLQAASVWVAPRLADRIGLVPTMVFTHLPSNMLLAAIAFA
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
PTLPVAIILVLARTALSQMDVPTRQALVMSVVDPSERTAAAAVTNAARYTVRPAGPLLGG
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHEEECCCCCHHHH
ALQGVALGLPLVVAGTVKGGYDLALWGWAQHAKVTSPSAPPESAA
HHHHHHHCCCEEEEEECCCCCEEEEECCHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA