| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715743
Identifier: 119715743
GI number: 119715743
Start: 1598244
End: 1598819
Strand: Reverse
Name: 119715743
Synonym: Noca_1507
Alternate gene names: NA
Gene position: 1598819-1598244 (Counterclockwise)
Preceding gene: 119715748
Following gene: 119715742
Centisome position: 32.07
GC content: 73.96
Gene sequence:
>576_bases GTGGCGATCCTGGCCTTCGACGACATGGAGGTGCTCGACTACGCCGGCCCGTACGAGGTGTTCAACGTCGCCGGCGAGCT GGGCGAGGGCGCGCCGTTCTCGGTGTTCTCGGTCGGCCTGACCGGCGCCCCGGCCGTCGGGCGGGGCGGGTTCACCGTCC TGCCGGCGTACTCCCTCGACGACGCGCCGCCGCCCGACCTGCTCGTGGTGCCCGGCGGCGCGGGCACCCGGCCGCTCCTG CATGACGAGCGGCTGCTCGCGTGGGTGCGCGAGCGCGCGGCCGAGGTCGAGCTGCTGCTGTCGGTGTGCACCGGGGCGCT GCTGCTCGGCGCGGCGGGGCTGCTGGAGCGGCGGCCGGCGACCACGCACCACGATGCGTACGACGAGCTCGCGGCGCTCT CCCCCACCACCCAGGTCGTGCGCGGCCAGCGGTTCGTGCGCAGCACCGAGACGATCCTCACCTCGGCCGGTGTCTCCGCC GGTGTCGACCTCTCGCTGCACGCCGTGCAGCTGCTGGCCGGCCAGGTCACCCGCGACCTCGTCGTAAGCGAGATGGAGTG GATGTGGCAATCGTGA
Upstream 100 bases:
>100_bases GGCGGTACGTCGTCGCGGTGGTCGGCATGTGGCCATTCGACCATCCGCCGCCGACAGCGTCCGTCAACGGCCCGACAATG GGCCGGTGAGTCAGCGAACC
Downstream 100 bases:
>100_bases CTGGCCCGGCCCGGGGCCGGTTGTCACCTCTGGCCGTAGGCGTTCCCACGGGCGGTCGATAGCGTCCTGCCATGACTGAA GGCCCCCTCTCCGACCTGGT
Product: ThiJ/PfpI domain-containing protein
Products: NA
Alternate protein names: ThiJ/PfpI Domain Protein; ThiJ/PfpI Family Protein; ThiJ/PfpI; AraC Family Transcription Regulator; AraC Family Transcriptional Regulator; Transcriptional Regulator AraC Family; DJ-1/PfpI Family; Transcriptional Regulator; DJ-1/PfpI Family Protein; ADPA Family Transcriptional Regulator; Intracellular Protease/Amidase; AraC/XylS Family Transcriptional Regulator; ThiJ/PfpI Family Transcriptional Regulator
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MAILAFDDMEVLDYAGPYEVFNVAGELGEGAPFSVFSVGLTGAPAVGRGGFTVLPAYSLDDAPPPDLLVVPGGAGTRPLL HDERLLAWVRERAAEVELLLSVCTGALLLGAAGLLERRPATTHHDAYDELAALSPTTQVVRGQRFVRSTETILTSAGVSA GVDLSLHAVQLLAGQVTRDLVVSEMEWMWQS
Sequences:
>Translated_191_residues MAILAFDDMEVLDYAGPYEVFNVAGELGEGAPFSVFSVGLTGAPAVGRGGFTVLPAYSLDDAPPPDLLVVPGGAGTRPLL HDERLLAWVRERAAEVELLLSVCTGALLLGAAGLLERRPATTHHDAYDELAALSPTTQVVRGQRFVRSTETILTSAGVSA GVDLSLHAVQLLAGQVTRDLVVSEMEWMWQS >Mature_190_residues AILAFDDMEVLDYAGPYEVFNVAGELGEGAPFSVFSVGLTGAPAVGRGGFTVLPAYSLDDAPPPDLLVVPGGAGTRPLLH DERLLAWVRERAAEVELLLSVCTGALLLGAAGLLERRPATTHHDAYDELAALSPTTQVVRGQRFVRSTETILTSAGVSAG VDLSLHAVQLLAGQVTRDLVVSEMEWMWQS
Specific function: Unknown
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20212; Mature: 20081
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAILAFDDMEVLDYAGPYEVFNVAGELGEGAPFSVFSVGLTGAPAVGRGGFTVLPAYSLD CEEEEECCHHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCC DAPPPDLLVVPGGAGTRPLLHDERLLAWVRERAAEVELLLSVCTGALLLGAAGLLERRPA CCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TTHHDAYDELAALSPTTQVVRGQRFVRSTETILTSAGVSAGVDLSLHAVQLLAGQVTRDL CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH VVSEMEWMWQS HHHHHHHHHCC >Mature Secondary Structure AILAFDDMEVLDYAGPYEVFNVAGELGEGAPFSVFSVGLTGAPAVGRGGFTVLPAYSLD EEEEECCHHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCC DAPPPDLLVVPGGAGTRPLLHDERLLAWVRERAAEVELLLSVCTGALLLGAAGLLERRPA CCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TTHHDAYDELAALSPTTQVVRGQRFVRSTETILTSAGVSAGVDLSLHAVQLLAGQVTRDL CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH VVSEMEWMWQS HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA