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The map label for this gene is mmgC [H]

Identifier: 119715692

GI number: 119715692

Start: 1543771

End: 1544967

Strand: Direct

Name: mmgC [H]

Synonym: Noca_1456

Alternate gene names: 119715692

Gene position: 1543771-1544967 (Clockwise)

Preceding gene: 119715691

Following gene: 119715693

Centisome position: 30.96

GC content: 66.75

Gene sequence:

>1197_bases
ATGGGCCGCCTGTGTGAGACCGAGGGACTGACCGAGGACCAGACCGAGATCCTCAAGGCCGTCCGCGCGTTCGTGGAGGA
GCGGATCCTCCCGGTCGCGACCGAGCTGGAGCACGCGGACGAGTATCCGCAGGAGATCGTCGACGGGCTCAAGGAGCTCG
GCATCTTCGGGCTCACGATCCCCGAGGAGTACGACGGCCTGGGCGAGTCGCTGCTGACCTATGCGCTGTGCGTGGAGGAG
ATCGCGCGCGGCTGGATGAGCGTGTCCGGGGTGATCAACACCCACTTCATCGTGGCCTACATGCTGATGAAGCACGGCAC
GGAGGAGCAGAAGCGCAAGTACCTGCCGAAGATGGCGACCGGCGAGATCCGGGGTGCGTTCTCCATGTCGGAGCCCGGCC
TGGGCTCCGACGTGTCGGCGGTGAAGACCAAGGCCACCAAGACCGACGGCGGCTACACGATCGACGGCCAGAAGATGTGG
CTGACCAACGGCGGCACCTCCAACCTGGTCGCGGTCCTGGCGCGGACCGATGAGGGTGCGGACTCGGTGTACAAGAACAT
GACGACGTTCCTGGTCGAGAAGGAGCCGGGCTTCGGGGAGACCGCGCCCGGGCTGACCATCCCGGGCAAGCTGGACAAGA
TGGGCTACAAGGGCGTGGAGACCACCGAGGCGGTCTTCGAGGGCCACCAGGTCTCCGACGACCAGGTCCTGGGCGGTGCT
CCGGGCCAGGGCTTCTACCAGATGATGGACGGCGTCGAGGTCGGCCGCGTCAACGTCGCGGCCCGGGCCGTGGGCATCGC
CAACCGCGCGTTCGAGCTGGCCATCGCCTACGCCCAGCAGCGCGAGACCTTCGGCAAGCCGATCGCGCAGCACCAGGCGA
TCCTGTTCCGGCTCGCGGAGATGGCGACCAAGGTCGAGACCGCGCACGCGATGATGGTCAAGGCGGCCCGCCTCAAGGAC
CGCGGCGAGCGCAACGACGTCGAGGCCGGGATGGCCAAGATGGTGGCGGCGGAGTACTGCAACGAGGTGGTCCAGGACTC
CTTCCGGATCCACGGCGGCTACGGCTACTCCAAGGAGTACGAGATCGAGCGGCTGTACCGCGAGGCGGCGTTCATGCTGA
TCGGCGAGGGCACCTCGGACATCCAGAAGATGATCATCGGCCGCTCACTGCTCAAGGACTACCAGCTGAAGGGCTGA

Upstream 100 bases:

>100_bases
ACGCGGTGCGTGATCTCACATGGGCCAAGACTGGGAAGAAGAAGTAGGTTACCCGCGAATTCGTCCCGCTGCCGGGACGC
CGCCGACCGAGAGGACGCCC

Downstream 100 bases:

>100_bases
CGCGCAGGCCCGCCAATGGGGCCGGTGAGACGGATGTGACGTTAGAGTTCTTCCGTCGCCTCACCTTCCCCGGAGGACCC
GATGCTGTCCGACCCCCGTT

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MGRLCETEGLTEDQTEILKAVRAFVEERILPVATELEHADEYPQEIVDGLKELGIFGLTIPEEYDGLGESLLTYALCVEE
IARGWMSVSGVINTHFIVAYMLMKHGTEEQKRKYLPKMATGEIRGAFSMSEPGLGSDVSAVKTKATKTDGGYTIDGQKMW
LTNGGTSNLVAVLARTDEGADSVYKNMTTFLVEKEPGFGETAPGLTIPGKLDKMGYKGVETTEAVFEGHQVSDDQVLGGA
PGQGFYQMMDGVEVGRVNVAARAVGIANRAFELAIAYAQQRETFGKPIAQHQAILFRLAEMATKVETAHAMMVKAARLKD
RGERNDVEAGMAKMVAAEYCNEVVQDSFRIHGGYGYSKEYEIERLYREAAFMLIGEGTSDIQKMIIGRSLLKDYQLKG

Sequences:

>Translated_398_residues
MGRLCETEGLTEDQTEILKAVRAFVEERILPVATELEHADEYPQEIVDGLKELGIFGLTIPEEYDGLGESLLTYALCVEE
IARGWMSVSGVINTHFIVAYMLMKHGTEEQKRKYLPKMATGEIRGAFSMSEPGLGSDVSAVKTKATKTDGGYTIDGQKMW
LTNGGTSNLVAVLARTDEGADSVYKNMTTFLVEKEPGFGETAPGLTIPGKLDKMGYKGVETTEAVFEGHQVSDDQVLGGA
PGQGFYQMMDGVEVGRVNVAARAVGIANRAFELAIAYAQQRETFGKPIAQHQAILFRLAEMATKVETAHAMMVKAARLKD
RGERNDVEAGMAKMVAAEYCNEVVQDSFRIHGGYGYSKEYEIERLYREAAFMLIGEGTSDIQKMIIGRSLLKDYQLKG
>Mature_397_residues
GRLCETEGLTEDQTEILKAVRAFVEERILPVATELEHADEYPQEIVDGLKELGIFGLTIPEEYDGLGESLLTYALCVEEI
ARGWMSVSGVINTHFIVAYMLMKHGTEEQKRKYLPKMATGEIRGAFSMSEPGLGSDVSAVKTKATKTDGGYTIDGQKMWL
TNGGTSNLVAVLARTDEGADSVYKNMTTFLVEKEPGFGETAPGLTIPGKLDKMGYKGVETTEAVFEGHQVSDDQVLGGAP
GQGFYQMMDGVEVGRVNVAARAVGIANRAFELAIAYAQQRETFGKPIAQHQAILFRLAEMATKVETAHAMMVKAARLKDR
GERNDVEAGMAKMVAAEYCNEVVQDSFRIHGGYGYSKEYEIERLYREAAFMLIGEGTSDIQKMIIGRSLLKDYQLKG

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI187960098, Length=387, Percent_Identity=39.7932816537468, Blast_Score=252, Evalue=4e-67,
Organism=Homo sapiens, GI4557231, Length=387, Percent_Identity=39.7932816537468, Blast_Score=252, Evalue=4e-67,
Organism=Homo sapiens, GI4557233, Length=388, Percent_Identity=35.8247422680412, Blast_Score=246, Evalue=2e-65,
Organism=Homo sapiens, GI226958412, Length=391, Percent_Identity=32.2250639386189, Blast_Score=226, Evalue=4e-59,
Organism=Homo sapiens, GI4501859, Length=388, Percent_Identity=32.7319587628866, Blast_Score=214, Evalue=1e-55,
Organism=Homo sapiens, GI226958414, Length=377, Percent_Identity=32.8912466843501, Blast_Score=212, Evalue=6e-55,
Organism=Homo sapiens, GI7656849, Length=387, Percent_Identity=31.0077519379845, Blast_Score=202, Evalue=4e-52,
Organism=Homo sapiens, GI4501857, Length=375, Percent_Identity=33.3333333333333, Blast_Score=201, Evalue=9e-52,
Organism=Homo sapiens, GI21361497, Length=380, Percent_Identity=33.1578947368421, Blast_Score=198, Evalue=9e-51,
Organism=Homo sapiens, GI76496475, Length=389, Percent_Identity=33.6760925449871, Blast_Score=185, Evalue=6e-47,
Organism=Homo sapiens, GI4557235, Length=389, Percent_Identity=33.6760925449871, Blast_Score=185, Evalue=7e-47,
Organism=Homo sapiens, GI4503943, Length=394, Percent_Identity=29.9492385786802, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI7669494, Length=368, Percent_Identity=29.8913043478261, Blast_Score=150, Evalue=1e-36,
Organism=Homo sapiens, GI211971008, Length=415, Percent_Identity=26.5060240963855, Blast_Score=132, Evalue=8e-31,
Organism=Homo sapiens, GI48976061, Length=415, Percent_Identity=26.5060240963855, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI38505218, Length=413, Percent_Identity=25.90799031477, Blast_Score=118, Evalue=1e-26,
Organism=Escherichia coli, GI87081958, Length=392, Percent_Identity=32.1428571428571, Blast_Score=182, Evalue=3e-47,
Organism=Escherichia coli, GI1786223, Length=394, Percent_Identity=28.9340101522843, Blast_Score=152, Evalue=3e-38,
Organism=Escherichia coli, GI87082384, Length=275, Percent_Identity=29.4545454545455, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI87081702, Length=381, Percent_Identity=22.8346456692913, Blast_Score=65, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17534899, Length=390, Percent_Identity=37.6923076923077, Blast_Score=245, Evalue=4e-65,
Organism=Caenorhabditis elegans, GI17569725, Length=391, Percent_Identity=37.3401534526854, Blast_Score=238, Evalue=4e-63,
Organism=Caenorhabditis elegans, GI17570075, Length=383, Percent_Identity=37.3368146214099, Blast_Score=238, Evalue=5e-63,
Organism=Caenorhabditis elegans, GI17538396, Length=390, Percent_Identity=32.5641025641026, Blast_Score=234, Evalue=7e-62,
Organism=Caenorhabditis elegans, GI17508101, Length=389, Percent_Identity=33.9331619537275, Blast_Score=224, Evalue=5e-59,
Organism=Caenorhabditis elegans, GI17506239, Length=390, Percent_Identity=32.8205128205128, Blast_Score=223, Evalue=1e-58,
Organism=Caenorhabditis elegans, GI17533517, Length=385, Percent_Identity=31.1688311688312, Blast_Score=197, Evalue=9e-51,
Organism=Caenorhabditis elegans, GI71985184, Length=385, Percent_Identity=30.3896103896104, Blast_Score=176, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI71990804, Length=303, Percent_Identity=34.3234323432343, Blast_Score=173, Evalue=1e-43,
Organism=Caenorhabditis elegans, GI17534353, Length=390, Percent_Identity=27.6923076923077, Blast_Score=160, Evalue=1e-39,
Organism=Caenorhabditis elegans, GI32563615, Length=240, Percent_Identity=35, Blast_Score=150, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI17505929, Length=389, Percent_Identity=28.5347043701799, Blast_Score=144, Evalue=7e-35,
Organism=Caenorhabditis elegans, GI71985192, Length=333, Percent_Identity=30.3303303303303, Blast_Score=142, Evalue=4e-34,
Organism=Caenorhabditis elegans, GI17551932, Length=377, Percent_Identity=26.525198938992, Blast_Score=138, Evalue=6e-33,
Organism=Caenorhabditis elegans, GI71982178, Length=284, Percent_Identity=25, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17562446, Length=400, Percent_Identity=24, Blast_Score=79, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17531909, Length=255, Percent_Identity=23.5294117647059, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17540912, Length=358, Percent_Identity=23.7430167597765, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI86563381, Length=275, Percent_Identity=24.7272727272727, Blast_Score=65, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI86563383, Length=275, Percent_Identity=24.7272727272727, Blast_Score=64, Evalue=9e-11,
Organism=Drosophila melanogaster, GI24660351, Length=383, Percent_Identity=39.4255874673629, Blast_Score=254, Evalue=5e-68,
Organism=Drosophila melanogaster, GI21356377, Length=394, Percent_Identity=35.2791878172589, Blast_Score=234, Evalue=7e-62,
Organism=Drosophila melanogaster, GI24646207, Length=384, Percent_Identity=37.2395833333333, Blast_Score=232, Evalue=4e-61,
Organism=Drosophila melanogaster, GI21355753, Length=390, Percent_Identity=32.5641025641026, Blast_Score=210, Evalue=1e-54,
Organism=Drosophila melanogaster, GI24666513, Length=386, Percent_Identity=31.3471502590674, Blast_Score=206, Evalue=2e-53,
Organism=Drosophila melanogaster, GI281363737, Length=344, Percent_Identity=31.1046511627907, Blast_Score=161, Evalue=9e-40,
Organism=Drosophila melanogaster, GI19920834, Length=384, Percent_Identity=26.0416666666667, Blast_Score=133, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 43650; Mature: 43519

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRLCETEGLTEDQTEILKAVRAFVEERILPVATELEHADEYPQEIVDGLKELGIFGLTI
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCEEECCC
PEEYDGLGESLLTYALCVEEIARGWMSVSGVINTHFIVAYMLMKHGTEEQKRKYLPKMAT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC
GEIRGAFSMSEPGLGSDVSAVKTKATKTDGGYTIDGQKMWLTNGGTSNLVAVLARTDEGA
CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEECCCEEEEECCCCCCEEEEEEECCCCH
DSVYKNMTTFLVEKEPGFGETAPGLTIPGKLDKMGYKGVETTEAVFEGHQVSDDQVLGGA
HHHHHHHHHEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHCCCCCCCCCEECCC
PGQGFYQMMDGVEVGRVNVAARAVGIANRAFELAIAYAQQRETFGKPIAQHQAILFRLAE
CCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
MATKVETAHAMMVKAARLKDRGERNDVEAGMAKMVAAEYCNEVVQDSFRIHGGYGYSKEY
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCH
EIERLYREAAFMLIGEGTSDIQKMIIGRSLLKDYQLKG
HHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GRLCETEGLTEDQTEILKAVRAFVEERILPVATELEHADEYPQEIVDGLKELGIFGLTI
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCEEECCC
PEEYDGLGESLLTYALCVEEIARGWMSVSGVINTHFIVAYMLMKHGTEEQKRKYLPKMAT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC
GEIRGAFSMSEPGLGSDVSAVKTKATKTDGGYTIDGQKMWLTNGGTSNLVAVLARTDEGA
CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEECCCEEEEECCCCCCEEEEEEECCCCH
DSVYKNMTTFLVEKEPGFGETAPGLTIPGKLDKMGYKGVETTEAVFEGHQVSDDQVLGGA
HHHHHHHHHEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHCCCCCCCCCEECCC
PGQGFYQMMDGVEVGRVNVAARAVGIANRAFELAIAYAQQRETFGKPIAQHQAILFRLAE
CCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
MATKVETAHAMMVKAARLKDRGERNDVEAGMAKMVAAEYCNEVVQDSFRIHGGYGYSKEY
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCH
EIERLYREAAFMLIGEGTSDIQKMIIGRSLLKDYQLKG
HHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]