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The map label for this gene is 119715651

Identifier: 119715651

GI number: 119715651

Start: 1498484

End: 1499644

Strand: Reverse

Name: 119715651

Synonym: Noca_1415

Alternate gene names: NA

Gene position: 1499644-1498484 (Counterclockwise)

Preceding gene: 119715652

Following gene: 119715650

Centisome position: 30.08

GC content: 70.71

Gene sequence:

>1161_bases
GTGACTATCAACCTTCGTCCCCCGCACTTCCGGGATCCGATGGCGCTGGACCCCAGCGCCGAGCTGCCCCTCCCGATCGA
CAGCGAGCTCCTCGACACACCCTCGATCCTGGTCGACCTCGACCAGGTCGAGCGCAACATCGCCTCGATGGCCAGCCTCG
CCAAACGGCGCGGGATGACGCTGCGGCCGCACGCGAAGAGCCACAAGAGCACCTTCATCGCCGACCTCCAGCTCGACGCT
GGTGCGACCGGCCTGTGCCTGGCCACTGCCGGTGAGGCCGAGGTGATGTGGCGCCACGGCGTGGCGGACCTCCTCCTGGC
CTACCCGGTGCTCGGCCGGGCCAAGCTCGACCGGCTCGCGCCGATCGTCGAGGCCGGCTCGCTGACGATGGTCGCCGACT
CGGTCGAGGTCGCCAGCGGCTACAGCGACCTGGCCTGCCGGACCGGTCGCGAGATCGCGGTGCTGATCGAGATCGACTCG
GGGATGAGGCGAGCGGGGGTCCCCCCCGAGCAGGCCGGAGCCGTGGCCGTCGAGGTCGACCGCCTTCCTGGTCTGCGGGT
CCGCGGCATCCTGACCCACGCGGGCCACTCCCACGCGGCCCTCGACCAGCGTGGGATCGAGGAGGTGGCGCGCGACGAGG
TGCGCGCCATGCAGCAGGCGCGCGAGACGGTCGAGCGCGCGGGTGTCACGGTGGAGGTCGTCAGCGCGGGGTCGACGATC
ACGACGCCATACCTGTCCTCGGACGACGGCATCACCGAGGTGCGACCGGGGACGTACGTCTACAACGACCTGCGCACCCT
GAGCCGGTATGCGTGCACCCCCGACCAGCTGGCGGTCACGATGCTCGCCACGGTGGTCAGCCGTGGCCCGGCCCGGGCCA
CCTTGAACGCCGGGAGCAAGAGCATCACCACCGCGTCCACCGTGCAGCACGGTCACGGTCACCTCGTCAACCGGCCGCGC
AGCGGGTTCGCCCTCCTCTCCGAGGAGCACGGGGTGTTGGAGCTCGCGACCGAGGACGACGACCTCCGTGTCGGCGACCG
GGTCCAGATCCTGCCTATCCACGTCTGTGTCTGGATGGACCTGCAACCCGAGGTGTACGGCACCCGCGGCGGGCAGGTCG
TCCAGCGAATCCGCGTCGACGCCATGCGTCGCAGCCTCTGA

Upstream 100 bases:

>100_bases
ACCGCGTTCGCGTCTCCTGACCGAGCGCCTCTCCCGGCTCATTTCGCGCTGCCGTACGCCCACCAGGCGTGCCGCAGCGC
CCGACCTGAAACAGAAGGCC

Downstream 100 bases:

>100_bases
TCCGCACCCAGGGAGACCCATGTCCGACGCCCAGCCGATCCTCCTCCTCAACCGCTCCGACGTACGTCGACTGCTCACCT
GGCGCGAGCTCATCGATGCC

Product: alanine racemase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MTINLRPPHFRDPMALDPSAELPLPIDSELLDTPSILVDLDQVERNIASMASLAKRRGMTLRPHAKSHKSTFIADLQLDA
GATGLCLATAGEAEVMWRHGVADLLLAYPVLGRAKLDRLAPIVEAGSLTMVADSVEVASGYSDLACRTGREIAVLIEIDS
GMRRAGVPPEQAGAVAVEVDRLPGLRVRGILTHAGHSHAALDQRGIEEVARDEVRAMQQARETVERAGVTVEVVSAGSTI
TTPYLSSDDGITEVRPGTYVYNDLRTLSRYACTPDQLAVTMLATVVSRGPARATLNAGSKSITTASTVQHGHGHLVNRPR
SGFALLSEEHGVLELATEDDDLRVGDRVQILPIHVCVWMDLQPEVYGTRGGQVVQRIRVDAMRRSL

Sequences:

>Translated_386_residues
MTINLRPPHFRDPMALDPSAELPLPIDSELLDTPSILVDLDQVERNIASMASLAKRRGMTLRPHAKSHKSTFIADLQLDA
GATGLCLATAGEAEVMWRHGVADLLLAYPVLGRAKLDRLAPIVEAGSLTMVADSVEVASGYSDLACRTGREIAVLIEIDS
GMRRAGVPPEQAGAVAVEVDRLPGLRVRGILTHAGHSHAALDQRGIEEVARDEVRAMQQARETVERAGVTVEVVSAGSTI
TTPYLSSDDGITEVRPGTYVYNDLRTLSRYACTPDQLAVTMLATVVSRGPARATLNAGSKSITTASTVQHGHGHLVNRPR
SGFALLSEEHGVLELATEDDDLRVGDRVQILPIHVCVWMDLQPEVYGTRGGQVVQRIRVDAMRRSL
>Mature_385_residues
TINLRPPHFRDPMALDPSAELPLPIDSELLDTPSILVDLDQVERNIASMASLAKRRGMTLRPHAKSHKSTFIADLQLDAG
ATGLCLATAGEAEVMWRHGVADLLLAYPVLGRAKLDRLAPIVEAGSLTMVADSVEVASGYSDLACRTGREIAVLIEIDSG
MRRAGVPPEQAGAVAVEVDRLPGLRVRGILTHAGHSHAALDQRGIEEVARDEVRAMQQARETVERAGVTVEVVSAGSTIT
TPYLSSDDGITEVRPGTYVYNDLRTLSRYACTPDQLAVTMLATVVSRGPARATLNAGSKSITTASTVQHGHGHLVNRPRS
GFALLSEEHGVLELATEDDDLRVGDRVQILPIHVCVWMDLQPEVYGTRGGQVVQRIRVDAMRRSL

Specific function: Catalyzes the reversible cleavage of D-theronine or D- allothreonine into glycine and acetaldehyde. Can also cleave D- beta-phenylserine, D-beta-hydroxy-alpha-aminovaleric acid, D-beta- 3,4-dihydroxyphenylserine and D-beta-3,4- methylenedioxyphenylserine

COG id: COG3616

COG function: function code E; Predicted amino acid aldolase or racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DSD1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001608 [H]

Pfam domain/function: PF01168 Ala_racemase_N [H]

EC number: =4.1.2.42 [H]

Molecular weight: Translated: 41613; Mature: 41482

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTINLRPPHFRDPMALDPSAELPLPIDSELLDTPSILVDLDQVERNIASMASLAKRRGMT
CEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHEEEHHHHHHHHHHHHHHHHHCCCE
LRPHAKSHKSTFIADLQLDAGATGLCLATAGEAEVMWRHGVADLLLAYPVLGRAKLDRLA
ECCCCCCCCCEEEEEEEECCCCCEEEEEECCCHHHHHHCCHHHHHHHHHCCCHHHHHHHH
PIVEAGSLTMVADSVEVASGYSDLACRTGREIAVLIEIDSGMRRAGVPPEQAGAVAVEVD
HHHCCCCEEEEECCHHHHCCCHHHHHCCCCEEEEEEEECCCCHHCCCCCHHCCEEEEEEC
RLPGLRVRGILTHAGHSHAALDQRGIEEVARDEVRAMQQARETVERAGVTVEVVSAGSTI
CCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEE
TTPYLSSDDGITEVRPGTYVYNDLRTLSRYACTPDQLAVTMLATVVSRGPARATLNAGSK
ECCEECCCCCCCCCCCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEECCCCC
SITTASTVQHGHGHLVNRPRSGFALLSEEHGVLELATEDDDLRVGDRVQILPIHVCVWMD
CCEEHHHHCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCEEEEEEEEEEEEEE
LQPEVYGTRGGQVVQRIRVDAMRRSL
CCCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TINLRPPHFRDPMALDPSAELPLPIDSELLDTPSILVDLDQVERNIASMASLAKRRGMT
EECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHEEEHHHHHHHHHHHHHHHHHCCCE
LRPHAKSHKSTFIADLQLDAGATGLCLATAGEAEVMWRHGVADLLLAYPVLGRAKLDRLA
ECCCCCCCCCEEEEEEEECCCCCEEEEEECCCHHHHHHCCHHHHHHHHHCCCHHHHHHHH
PIVEAGSLTMVADSVEVASGYSDLACRTGREIAVLIEIDSGMRRAGVPPEQAGAVAVEVD
HHHCCCCEEEEECCHHHHCCCHHHHHCCCCEEEEEEEECCCCHHCCCCCHHCCEEEEEEC
RLPGLRVRGILTHAGHSHAALDQRGIEEVARDEVRAMQQARETVERAGVTVEVVSAGSTI
CCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEE
TTPYLSSDDGITEVRPGTYVYNDLRTLSRYACTPDQLAVTMLATVVSRGPARATLNAGSK
ECCEECCCCCCCCCCCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEECCCCC
SITTASTVQHGHGHLVNRPRSGFALLSEEHGVLELATEDDDLRVGDRVQILPIHVCVWMD
CCEEHHHHCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCEEEEEEEEEEEEEE
LQPEVYGTRGGQVVQRIRVDAMRRSL
CCCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9642221 [H]