| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715550
Identifier: 119715550
GI number: 119715550
Start: 1386839
End: 1387849
Strand: Reverse
Name: 119715550
Synonym: Noca_1314
Alternate gene names: NA
Gene position: 1387849-1386839 (Counterclockwise)
Preceding gene: 119715553
Following gene: 119715549
Centisome position: 27.84
GC content: 74.09
Gene sequence:
>1011_bases ATGCTTCTGCCCCGTGCCCTCGTCGCGGCGACCCTTTCCGTGGCGACGTCCCTCGCGCTCGCCGGGTGCGCGGCCGGCGA CCGACCAGCCGCGGACGCGCGGCTCTCCGCCGCGCCGGCCACGGCCACGCAGGTGGTGGCGATCTCGGTCGACGGGCTCA ACACCGAGGCCCTCGACCGGCTCGGGGCGGACGGCGCCCCCACGCTCCACCGGCTGCTCGCGGAGGGCGCCGGCACCCTC AACGCGCGCACCGAGTACGAGCAGACCGTCACCCTGCCCAACCACGCGAGCATGATGACCGGCCGGCGGATCGCCGCCGG CAAGGGCGGTCACGGCGTCACCTGGGACGACGACCGGCCCGACTCCACGGTGCAGCAGGCCGCCGGGCACGGCGTCGCCT CGATCTTCACCACCGTGCACGCCGCCGGCGGCAGCACCGCGCTCTACACGACCAAGTCGAAGTTCCGCCTCTACGACCGG TCCTGGCCCCGCGGCATCGACACCTTCCGGGTGCGGGAGAACCAGCGGCGGCTGGTACGCCTGGCCCGGGTCGACCTGGC CGACGGGCCGCCGACGTTCACCTTCCTGCACGTCTCCCTGCCCGACCGCTTCGGGCACCGCTACGGCGGCATGTCGCGGC AGTACCTCGCCGCCGTCCAGCGCACCGATGCCCAGCTGGGCACCCTGCTGCGCACGCTCGCCGGCACCGACGCGGTCCTG GTCCTGACCGCCGACCACGGGTTCGTCACCGGCAGGACCGACCACTCCGGACGCCGGAACATCGAGAACTACCGGATCCC GTTCCTCGCCTGGGGTCCGGGCGTCGACAGGGGCGACCTCTATGCGATGAACCCCGACTTCGCCGATCCCGGCACGAGCA GGCCGTCGTACGCCGGAGGGCAGCCGGTGCGCAACGGCGACCTGGCCAACCTCGCGGCCGGCCTGCTCGGACTCGACGCC GTCCCCGGCAGCGGGCTGGACGCGGACCAGTCGCTCGGCGTCACCGACTGA
Upstream 100 bases:
>100_bases CAGGCAAGGCTAGAACCTCGCGCCCCCGTCCGCATGGTCACGCGACGGAGGTCACGGGAGATCACGATCACGACGGCTCC CGGTGGGTACCGTCGGTCCC
Downstream 100 bases:
>100_bases CCGTCCAACCGCCCGGTCCGCGCCACGCCGCCACCGGCGATTCGCTCGCGTGGGCGCAGCCCCGGGGTCACAATCGGCCC ATGGAAGCAGACGCAGCGGA
Product: type I phosphodiesterase/nucleotide pyrophosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MLLPRALVAATLSVATSLALAGCAAGDRPAADARLSAAPATATQVVAISVDGLNTEALDRLGADGAPTLHRLLAEGAGTL NARTEYEQTVTLPNHASMMTGRRIAAGKGGHGVTWDDDRPDSTVQQAAGHGVASIFTTVHAAGGSTALYTTKSKFRLYDR SWPRGIDTFRVRENQRRLVRLARVDLADGPPTFTFLHVSLPDRFGHRYGGMSRQYLAAVQRTDAQLGTLLRTLAGTDAVL VLTADHGFVTGRTDHSGRRNIENYRIPFLAWGPGVDRGDLYAMNPDFADPGTSRPSYAGGQPVRNGDLANLAAGLLGLDA VPGSGLDADQSLGVTD
Sequences:
>Translated_336_residues MLLPRALVAATLSVATSLALAGCAAGDRPAADARLSAAPATATQVVAISVDGLNTEALDRLGADGAPTLHRLLAEGAGTL NARTEYEQTVTLPNHASMMTGRRIAAGKGGHGVTWDDDRPDSTVQQAAGHGVASIFTTVHAAGGSTALYTTKSKFRLYDR SWPRGIDTFRVRENQRRLVRLARVDLADGPPTFTFLHVSLPDRFGHRYGGMSRQYLAAVQRTDAQLGTLLRTLAGTDAVL VLTADHGFVTGRTDHSGRRNIENYRIPFLAWGPGVDRGDLYAMNPDFADPGTSRPSYAGGQPVRNGDLANLAAGLLGLDA VPGSGLDADQSLGVTD >Mature_336_residues MLLPRALVAATLSVATSLALAGCAAGDRPAADARLSAAPATATQVVAISVDGLNTEALDRLGADGAPTLHRLLAEGAGTL NARTEYEQTVTLPNHASMMTGRRIAAGKGGHGVTWDDDRPDSTVQQAAGHGVASIFTTVHAAGGSTALYTTKSKFRLYDR SWPRGIDTFRVRENQRRLVRLARVDLADGPPTFTFLHVSLPDRFGHRYGGMSRQYLAAVQRTDAQLGTLLRTLAGTDAVL VLTADHGFVTGRTDHSGRRNIENYRIPFLAWGPGVDRGDLYAMNPDFADPGTSRPSYAGGQPVRNGDLANLAAGLLGLDA VPGSGLDADQSLGVTD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35365; Mature: 35365
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLPRALVAATLSVATSLALAGCAAGDRPAADARLSAAPATATQVVAISVDGLNTEALDR CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHH LGADGAPTLHRLLAEGAGTLNARTEYEQTVTLPNHASMMTGRRIAAGKGGHGVTWDDDRP HCCCCCHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHCCCEEECCCCCCCCCCCCCCC DSTVQQAAGHGVASIFTTVHAAGGSTALYTTKSKFRLYDRSWPRGIDTFRVRENQRRLVR CHHHHHHHCCCHHHHHHHHHCCCCCEEEEEECCCEEEECCCCCCCCCCEEEHHHHHHHHH LARVDLADGPPTFTFLHVSLPDRFGHRYGGMSRQYLAAVQRTDAQLGTLLRTLAGTDAVL HHHHCCCCCCCCEEEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEE VLTADHGFVTGRTDHSGRRNIENYRIPFLAWGPGVDRGDLYAMNPDFADPGTSRPSYAGG EEEECCCEEECCCCCCCCCCCCCEECCEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCC QPVRNGDLANLAAGLLGLDAVPGSGLDADQSLGVTD CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLLPRALVAATLSVATSLALAGCAAGDRPAADARLSAAPATATQVVAISVDGLNTEALDR CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHH LGADGAPTLHRLLAEGAGTLNARTEYEQTVTLPNHASMMTGRRIAAGKGGHGVTWDDDRP HCCCCCHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHCCCEEECCCCCCCCCCCCCCC DSTVQQAAGHGVASIFTTVHAAGGSTALYTTKSKFRLYDRSWPRGIDTFRVRENQRRLVR CHHHHHHHCCCHHHHHHHHHCCCCCEEEEEECCCEEEECCCCCCCCCCEEEHHHHHHHHH LARVDLADGPPTFTFLHVSLPDRFGHRYGGMSRQYLAAVQRTDAQLGTLLRTLAGTDAVL HHHHCCCCCCCCEEEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEE VLTADHGFVTGRTDHSGRRNIENYRIPFLAWGPGVDRGDLYAMNPDFADPGTSRPSYAGG EEEECCCEEECCCCCCCCCCCCCEECCEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCC QPVRNGDLANLAAGLLGLDAVPGSGLDADQSLGVTD CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA