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The map label for this gene is ycjP [C]

Identifier: 119715541

GI number: 119715541

Start: 1379321

End: 1380208

Strand: Direct

Name: ycjP [C]

Synonym: Noca_1305

Alternate gene names: 119715541

Gene position: 1379321-1380208 (Clockwise)

Preceding gene: 119715540

Following gene: 119715542

Centisome position: 27.66

GC content: 67.0

Gene sequence:

>888_bases
ATGAGCACCACGGCTCTTCCCACGGCCGACACCGTCCTCGCGCCCTCCGGCCGGCGCTCGGACCGCACCGGCGGGTCCAC
GGCGATGCGCACCGTGCGGTACGTCCTGCTGATCTTCTTCCTGCTGGTCGTGCTGCTGCCGGCGTACGTCTTGTTCGTCA
CCTCGTTCAAGGGTCTCGGCGACGCGACCCCGAGCCGCGCGTGGTCGCTGCCCCAGTCGTGGGAGACCGCCGGATGGGAC
CGGGCCTGGGAGGTCCTCTCGCCGGCGCTCGTGCGCACCTTCTCGATGGTCATCCCGGCCTCGATCATCTCCGCGATGCT
CGGGTCGATGAACGGCTTCGTGCTCGCGAAGTGGCGCTTCCCGGGGGCCGACGTGGTCTTCACGCTGCTGCTGTTCGGGA
TGTTCATCCCCTACCAGGCCGTGATGATCCCGCTGGTCCAGCTGATGCAGAACCTCGGCGTCCCGAACGGCGTGCCGAGC
CTGATCGTGCTGCACGTCGTCTACGGCATCCCGATCACGACGCTGATCTTCCGCAACTACTACGCGTCGATCCCGACCGA
CCTGATCGAGGCGGCCCGCGTGGACGGTGCCGGGATGCTGCGCACCTACTCCTCGATCGTGCTGCCGATCTCCGCGCCCG
CGTTCGTCGTCGTGCTGATCTGGCAGTTCACGTCGGCCTGGAACGACTACCTGTTCGCGCTGTTCTTCTCGAACTCGCGC
AACGGCCCGGTCACCATCTCGCTGAACTTCCTCGCCAGCGGCCAGCTGCAGAACTACTCCGCGAGCATGGCCGGTGCGCT
GATCGCGTCCCTGCCGACGTTGCTCGTGTACATCATCCTCGGGCGCTGGTTCGTCAGCGGCCTGATGGCGGGTTCGGTCA
AGGGCTGA

Upstream 100 bases:

>100_bases
ACGCCCGCTCCGCGGCGATCGGCACGATCCTGCTCGTGATCGTGGCGTTCCTGATCATCCCCTACCTCGTCTACACCTAC
CGGCAGGAGCGGCTGACCCG

Downstream 100 bases:

>100_bases
TGGACGCCTGATGGAGACCGAGGCGGAGGGCCGGAGGCTGCTGGCCTTCGCCCGTCGCAGTGCCCTGCCCGGGCTCGGGT
TCGGTTGGCTGGACGACCGT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MSTTALPTADTVLAPSGRRSDRTGGSTAMRTVRYVLLIFFLLVVLLPAYVLFVTSFKGLGDATPSRAWSLPQSWETAGWD
RAWEVLSPALVRTFSMVIPASIISAMLGSMNGFVLAKWRFPGADVVFTLLLFGMFIPYQAVMIPLVQLMQNLGVPNGVPS
LIVLHVVYGIPITTLIFRNYYASIPTDLIEAARVDGAGMLRTYSSIVLPISAPAFVVVLIWQFTSAWNDYLFALFFSNSR
NGPVTISLNFLASGQLQNYSASMAGALIASLPTLLVYIILGRWFVSGLMAGSVKG

Sequences:

>Translated_295_residues
MSTTALPTADTVLAPSGRRSDRTGGSTAMRTVRYVLLIFFLLVVLLPAYVLFVTSFKGLGDATPSRAWSLPQSWETAGWD
RAWEVLSPALVRTFSMVIPASIISAMLGSMNGFVLAKWRFPGADVVFTLLLFGMFIPYQAVMIPLVQLMQNLGVPNGVPS
LIVLHVVYGIPITTLIFRNYYASIPTDLIEAARVDGAGMLRTYSSIVLPISAPAFVVVLIWQFTSAWNDYLFALFFSNSR
NGPVTISLNFLASGQLQNYSASMAGALIASLPTLLVYIILGRWFVSGLMAGSVKG
>Mature_294_residues
STTALPTADTVLAPSGRRSDRTGGSTAMRTVRYVLLIFFLLVVLLPAYVLFVTSFKGLGDATPSRAWSLPQSWETAGWDR
AWEVLSPALVRTFSMVIPASIISAMLGSMNGFVLAKWRFPGADVVFTLLLFGMFIPYQAVMIPLVQLMQNLGVPNGVPSL
IVLHVVYGIPITTLIFRNYYASIPTDLIEAARVDGAGMLRTYSSIVLPISAPAFVVVLIWQFTSAWNDYLFALFFSNSRN
GPVTISLNFLASGQLQNYSASMAGALIASLPTLLVYIILGRWFVSGLMAGSVKG

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=282, Percent_Identity=29.0780141843972, Blast_Score=117, Evalue=9e-28,
Organism=Escherichia coli, GI1789860, Length=270, Percent_Identity=24.8148148148148, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1790464, Length=199, Percent_Identity=29.1457286432161, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32034; Mature: 31903

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTALPTADTVLAPSGRRSDRTGGSTAMRTVRYVLLIFFLLVVLLPAYVLFVTSFKGLG
CCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DATPSRAWSLPQSWETAGWDRAWEVLSPALVRTFSMVIPASIISAMLGSMNGFVLAKWRF
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC
PGADVVFTLLLFGMFIPYQAVMIPLVQLMQNLGVPNGVPSLIVLHVVYGIPITTLIFRNY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
YASIPTDLIEAARVDGAGMLRTYSSIVLPISAPAFVVVLIWQFTSAWNDYLFALFFSNSR
HHHCCHHHHHHHHCCCCHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHEEEEEECCCC
NGPVTISLNFLASGQLQNYSASMAGALIASLPTLLVYIILGRWFVSGLMAGSVKG
CCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
STTALPTADTVLAPSGRRSDRTGGSTAMRTVRYVLLIFFLLVVLLPAYVLFVTSFKGLG
CCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DATPSRAWSLPQSWETAGWDRAWEVLSPALVRTFSMVIPASIISAMLGSMNGFVLAKWRF
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC
PGADVVFTLLLFGMFIPYQAVMIPLVQLMQNLGVPNGVPSLIVLHVVYGIPITTLIFRNY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
YASIPTDLIEAARVDGAGMLRTYSSIVLPISAPAFVVVLIWQFTSAWNDYLFALFFSNSR
HHHCCHHHHHHHHCCCCHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHEEEEEECCCC
NGPVTISLNFLASGQLQNYSASMAGALIASLPTLLVYIILGRWFVSGLMAGSVKG
CCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]